FFCP PHASE1:Mm9::chr13:43218218..43218238,+: Difference between revisions
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{{FFCP|EntrezGene=218194|HGNC=|MCL_coexpression_id=2843|UniProt=|association_with_transcript=0bp_to_ENSMUST00000136576_5end|description=CAGE_peak_7_at_Phactr1_5end|id=chr13:43218218..43218238,+|ontology_enrichment_celltype=CL:0000107!7.55e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,7.05e-18,9;CL:0000349,1.68e-07,3;CL:0000351,1.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!7.55e-08!9;UBERON:0001008!1.01e-07!17;UBERON:0006554!1.86e-07!16;UBERON:0000010!3.94e-07!11;UBERON:0002113!5.45e-07!14;UBERON:0003918!5.45e-07!14;UBERON:0005095!5.45e-07!14;UBERON:0007687!5.45e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.05e-18,9;UBERON:0000010,3.16e-17,11;UBERON:0006554,1.54e-13,18;UBERON:0001008,1.12e-12,19;UBERON:0002113,5.26e-12,14;UBERON:0003918,5.26e-12,14;UBERON:0011143,5.26e-12,14;UBERON:0005095,5.26e-12,14;UBERON:0007687,5.26e-12,14;UBERON:0000014,1.32e-09,5;UBERON:0001003,1.32e-09,5;UBERON:0002097,1.32e-09,5;UBERON:0002199,1.32e-09,5;UBERON:0007029,1.32e-09,5;UBERON:0007376,1.32e-09,5;UBERON:0002416,1.32e-09,5;UBERON:0007383,1.32e-09,5;UBERON:0000358,1.68e-07,3;UBERON:0000307,1.68e-07,3;UBERON:0007010,1.68e-07,3;UBERON:0010313,2.34e-07,3;UBERON:0002342,2.34e-07,3;UBERON:0002005,2.34e-07,3;UBERON:0005428,2.34e-07,3;UBERON:0005062,2.34e-07,3;UBERON:0000489,2.62e-07,21;UBERON:0005631,2.96e-07,3;UBERON:0000478,2.96e-07,3;UBERON:0000158,2.96e-07,3;UBERON:0000013,3.10e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,2.29226751951005,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,1.03575153458869,0,1.21439728736295,0.304465478312141,0.230615497256059,0.150722640552623,0,0,3.70792451601561,0,0,1.13236794963186,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.611036183101898,0.124406970610093,0.505445516867349,0.420883711772948,1.69156575851515,0,0.540186389416048,0.150704817835715,0.136072998302656,0,0,0,0.215567992932842,0.756424320671277,0.527853372491847,0,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,3.62590025909898,2.32236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,3.79335801906163,2.74196430263349,2.25415471346161,4.2766778847516,4.65485969202302,2.59502533594179,6.26041717530147,4.42830443938806,2.98297582898612,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.518054945597687,0,0,0,26.555270743028,1.65562047782839,0.321101179975584,0,0,0,8.51872192423893,12.1036010731958,6.67812532971677,4.30143836314594,5.12436950389506,1.69845918473299,9.31064613852257,5.55286130031493,7.11518000303742,0,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,1.21390318077491,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,27.4565898434541,26.2671767871137,0.441056796109924,5.11147384118588,1.13025098687134,1.86970067277283,4.17803204010978,10.9974402829191,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,0,3.95419991976419,0.203319467126849,0.216010681643603,0.627264888043406,0,0.134864346384821,0.330613822901344,0,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0.39736270956253,0.240390899039938,0,0.201932899896295,0.228620419965,0,0.194915761479505,0.481059208201647,0.467507608726276,0,5.99362074109975,37.6798197759798,21.6571155109661,0.386379188064381,0.187682475451182,2.19781949120718,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,4.98179268404048,1.19707462020309,0.682934423016537,0.972426868273176,0.838452650511929,0.367687016900028,0.44449345560323,0.412070114477788,0,0,1.01391719956096,0.377252682772152,0.280924522409647,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0.581385666529314,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.385813221962283,0.499621155875892,0.935726433781634,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p7@Phactr1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:218194 | |||
|HGNC= | |||
|MCL_coexpression_id=2843 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000136576_5end | |||
|cluster_id=chr13:43218218..43218238,+ | |||
|description=CAGE_peak_7_at_Phactr1_5end | |||
|id=chr13:43218218..43218238,+ | |||
|ontology_enrichment_celltype=CL:0000107!7.55e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.05e-18,9;CL:0000349,1.68e-07,3;CL:0000351,1.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!7.55e-08!9;UBERON:0001008!1.01e-07!17;UBERON:0006554!1.86e-07!16;UBERON:0000010!3.94e-07!11;UBERON:0002113!5.45e-07!14;UBERON:0003918!5.45e-07!14;UBERON:0005095!5.45e-07!14;UBERON:0007687!5.45e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.05e-18,9;UBERON:0000010,3.16e-17,11;UBERON:0006554,1.54e-13,18;UBERON:0001008,1.12e-12,19;UBERON:0002113,5.26e-12,14;UBERON:0003918,5.26e-12,14;UBERON:0011143,5.26e-12,14;UBERON:0005095,5.26e-12,14;UBERON:0007687,5.26e-12,14;UBERON:0000014,1.32e-09,5;UBERON:0001003,1.32e-09,5;UBERON:0002097,1.32e-09,5;UBERON:0002199,1.32e-09,5;UBERON:0007029,1.32e-09,5;UBERON:0007376,1.32e-09,5;UBERON:0002416,1.32e-09,5;UBERON:0007383,1.32e-09,5;UBERON:0000358,1.68e-07,3;UBERON:0000307,1.68e-07,3;UBERON:0007010,1.68e-07,3;UBERON:0010313,2.34e-07,3;UBERON:0002342,2.34e-07,3;UBERON:0002005,2.34e-07,3;UBERON:0005428,2.34e-07,3;UBERON:0005062,2.34e-07,3;UBERON:0000489,2.62e-07,21;UBERON:0005631,2.96e-07,3;UBERON:0000478,2.96e-07,3;UBERON:0000158,2.96e-07,3;UBERON:0000013,3.10e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,2.29226751951005,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,1.03575153458869,0,1.21439728736295,0.304465478312141,0.230615497256059,0.150722640552623,0,0,3.70792451601561,0,0,1.13236794963186,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.611036183101898,0.124406970610093,0.505445516867349,0.420883711772948,1.69156575851515,0,0.540186389416048,0.150704817835715,0.136072998302656,0,0,0,0.215567992932842,0.756424320671277,0.527853372491847,0,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,3.62590025909898,2.32236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,3.79335801906163,2.74196430263349,2.25415471346161,4.2766778847516,4.65485969202302,2.59502533594179,6.26041717530147,4.42830443938806,2.98297582898612,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.518054945597687,0,0,0,26.555270743028,1.65562047782839,0.321101179975584,0,0,0,8.51872192423893,12.1036010731958,6.67812532971677,4.30143836314594,5.12436950389506,1.69845918473299,9.31064613852257,5.55286130031493,7.11518000303742,0,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,1.21390318077491,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,27.4565898434541,26.2671767871137,0.441056796109924,5.11147384118588,1.13025098687134,1.86970067277283,4.17803204010978,10.9974402829191,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,0,3.95419991976419,0.203319467126849,0.216010681643603,0.627264888043406,0,0.134864346384821,0.330613822901344,0,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0.39736270956253,0.240390899039938,0,0.201932899896295,0.228620419965,0,0.194915761479505,0.481059208201647,0.467507608726276,0,5.99362074109975,37.6798197759798,21.6571155109661,0.386379188064381,0.187682475451182,2.19781949120718,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,4.98179268404048,1.19707462020309,0.682934423016537,0.972426868273176,0.838452650511929,0.367687016900028,0.44449345560323,0.412070114477788,0,0,1.01391719956096,0.377252682772152,0.280924522409647,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0.581385666529314,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.385813221962283,0.499621155875892,0.935726433781634,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p7@Phactr1 | |||
}} |
Revision as of 00:09, 6 August 2015
Short description: | p7@Phactr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Phactr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2843 |
Association with transcript: | 0bp_to_ENSMUST00000136576_5end |
EntrezGene: | 218194 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.05e-18 | 9 |
extraembryonic cell | 1.68e-07 | 3 |
trophoblast cell | 1.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 7.05e-18 | 9 |
peripheral nervous system | 3.16e-17 | 11 |
urinary system structure | 1.54e-13 | 18 |
renal system | 1.12e-12 | 19 |
kidney | 5.26e-12 | 14 |
kidney mesenchyme | 5.26e-12 | 14 |
upper urinary tract | 5.26e-12 | 14 |
kidney rudiment | 5.26e-12 | 14 |
kidney field | 5.26e-12 | 14 |
zone of skin | 1.32e-09 | 5 |
skin epidermis | 1.32e-09 | 5 |
skin of body | 1.32e-09 | 5 |
integument | 1.32e-09 | 5 |
surface | 1.32e-09 | 5 |
outer epithelium | 1.32e-09 | 5 |
integumental system | 1.32e-09 | 5 |
enveloping layer of ectoderm | 1.32e-09 | 5 |
blastocyst | 1.68e-07 | 3 |
blastula | 1.68e-07 | 3 |
cleaving embryo | 1.68e-07 | 3 |
neural crest-derived structure | 2.34e-07 | 3 |
neural crest | 2.34e-07 | 3 |
enteric nervous system | 2.34e-07 | 3 |
vagal neural crest | 2.34e-07 | 3 |
neural fold | 2.34e-07 | 3 |
cavitated compound organ | 2.62e-07 | 21 |
extraembryonic membrane | 2.96e-07 | 3 |
extraembryonic structure | 2.96e-07 | 3 |
membranous layer | 2.96e-07 | 3 |
sympathetic nervous system | 3.10e-07 | 3 |