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FFCP PHASE1:Mm9::chr3:130813254..130813263,+: Difference between revisions

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{{FFCP|EntrezGene=16842|HGNC=|MCL_coexpression_id=33|UniProt=P27782,D3Z654,Q8BGZ9,Q3TYB0|association_with_transcript=-125bp_to_ENSMUST00000029611,ENSMUST00000066849,ENSMUST00000106341,NM_010703,uc008rjf.1,uc008rjg.1_5end|description=CAGE_peak_4_at_Lef1_5end|id=chr3:130813254..130813263,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,1.03e-10,9;CL:0000789,1.03e-10,9;CL:0002420,1.03e-10,9;CL:0002419,1.03e-10,9;CL:0000790,1.03e-10,9;CL:0000624,6.97e-09,8;CL:0000084,1.59e-08,11;CL:0000827,1.59e-08,11;CL:0000838,1.05e-07,12;CL:0000542,5.14e-07,13;CL:0000051,5.14e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.11e-12!94;UBERON:0003408!9.84e-11!24;UBERON:0002370!2.24e-10!23;UBERON:0000974!2.24e-10!23;UBERON:0004807!2.24e-10!23;UBERON:0005058!2.24e-10!23;UBERON:0003351!2.24e-10!23;UBERON:0009113!2.24e-10!23;UBERON:0003295!2.24e-10!23;UBERON:0009722!2.24e-10!23;UBERON:0005562!2.24e-10!23;UBERON:0007690!2.24e-10!23;UBERON:0004177!2.26e-10!29;UBERON:0006562!2.87e-10!24;UBERON:0001557!2.87e-10!24;UBERON:0001042!2.87e-10!24;UBERON:0008814!2.87e-10!24;UBERON:0009145!2.87e-10!24;UBERON:0007811!4.45e-09!86;UBERON:0000072!5.34e-08!27;UBERON:0001004!9.18e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.45e-25,23;UBERON:0000974,2.45e-25,23;UBERON:0004807,2.45e-25,23;UBERON:0005058,2.45e-25,23;UBERON:0003351,2.45e-25,23;UBERON:0009113,2.45e-25,23;UBERON:0003295,2.45e-25,23;UBERON:0009722,2.45e-25,23;UBERON:0005562,2.45e-25,23;UBERON:0007690,2.45e-25,23;UBERON:0006562,4.57e-24,24;UBERON:0003408,4.57e-24,24;UBERON:0001557,4.57e-24,24;UBERON:0001042,4.57e-24,24;UBERON:0008814,4.57e-24,24;UBERON:0009145,4.57e-24,24;UBERON:0000072,8.01e-21,27;UBERON:0000153,1.26e-20,43;UBERON:0004177,4.90e-19,29;UBERON:0005057,4.90e-19,29;UBERON:0007811,4.92e-16,36;UBERON:0000077,6.51e-15,35;UBERON:0000065,5.16e-12,41;UBERON:0001004,1.30e-11,42;UBERON:0002368,1.53e-10,60;UBERON:0002390,1.61e-10,45;UBERON:0003061,1.61e-10,45;UBERON:0002193,1.44e-09,48;UBERON:0002405,1.44e-09,48;UBERON:0002530,2.68e-09,65;UBERON:0003929,9.76e-09,55;UBERON:0003081,6.92e-08,87;UBERON:0000949,7.36e-08,72;UBERON:0000490,2.57e-07,66|phase1_expression=1.44133962394315,0,0,0,0,0,0,4.00282302668886,2.39340827657833,4.68129052643987,0.171217968225505,0.239316476986009,6.84802919724823,7.69299541287177,0,0.404950534779652,0,0.473193248037357,0.548457734422955,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,9.42970784614748,11.0910953717013,0,0,0,2.02316460859598,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0,0,0.220868540951614,0,0.191690942036473,0,0,1.78762273319263,1.38245879930619,1.97829431595291,2.28719109006024,1.04182674111352,0.279182999001381,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,1.04853447583376,0,0,0.347648640384553,0.255715457330331,1.87009240103604,0.324482526135515,0.407357455401265,0.248813941220186,2.27450482590307,0,0.910843100738926,0.459804208866946,0.360124259610698,0.30140963567143,0,0,0,0.258703370739016,2.15567992932842,1.70195472151037,1.58356011747554,0.876782929710299,0.556094498451196,1.0447564995665,1.23469281844766,2.18937693500343,0,0,0,1.44988040774851,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.617427674275707,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.569003702859245,0.799739588268102,0,0.610953983535943,0.193952487167626,0.49095073923223,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.494910368917606,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,1.44048875225048,1.29358683782755,0.643011105094777,1.24138163549592,0.356737635204141,0.658196082408484,0.608929898229199,0.469343416127421,0,0,1.48397627647332,0.807322133479528,2.35220407219808,2.50681922406587,2.29797259643086,0.291480836629851,0.370850604021019,0.512612642393558,0,0.555583582109135,0.565105371014073,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.138199973804424,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.448549638131936,0.496375471371293,0,0.129159823477731,0,0,0,0.104859344425711,0,0,8.21628913633263,1.01362607645082,2.67048488628551,5.97635785697857,8.05620130503666,9.13934231993819,6.37035882455835,8.12292399460175,6.05798699688886,6.55378537232999,9.98179232854721,7.89408833991995,6.73482891482306,9.23327527234395,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,1.3492355185943,1.19707462020309,0.512200817262403,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.631790158511746,0.476293691283074,0.927074607558844,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.752875043322645,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,0,0.474540072496697,0.197008964751127,0,0.464810523557898,0,0.499621155875892,0.701794825336225,0.644613162144895,0.191288332068843,0.661774257358546,0.695603506861264|short_description=p4@Lef1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16842
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=uniprot:P27782,uniprot:D3Z654,uniprot:Q8BGZ9,uniprot:Q3TYB0
|association_with_transcript=-125bp_to_ENSMUST00000029611,ENSMUST00000066849,ENSMUST00000106341,NM_010703,uc008rjf.1,uc008rjg.1_5end
|cluster_id=chr3:130813254..130813263,+
|description=CAGE_peak_4_at_Lef1_5end
|id=chr3:130813254..130813263,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,1.03e-10,9;CL:0000789,1.03e-10,9;CL:0002420,1.03e-10,9;CL:0002419,1.03e-10,9;CL:0000790,1.03e-10,9;CL:0000624,6.97e-09,8;CL:0000084,1.59e-08,11;CL:0000827,1.59e-08,11;CL:0000838,1.05e-07,12;CL:0000542,5.14e-07,13;CL:0000051,5.14e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.11e-12!94;UBERON:0003408!9.84e-11!24;UBERON:0002370!2.24e-10!23;UBERON:0000974!2.24e-10!23;UBERON:0004807!2.24e-10!23;UBERON:0005058!2.24e-10!23;UBERON:0003351!2.24e-10!23;UBERON:0009113!2.24e-10!23;UBERON:0003295!2.24e-10!23;UBERON:0009722!2.24e-10!23;UBERON:0005562!2.24e-10!23;UBERON:0007690!2.24e-10!23;UBERON:0004177!2.26e-10!29;UBERON:0006562!2.87e-10!24;UBERON:0001557!2.87e-10!24;UBERON:0001042!2.87e-10!24;UBERON:0008814!2.87e-10!24;UBERON:0009145!2.87e-10!24;UBERON:0007811!4.45e-09!86;UBERON:0000072!5.34e-08!27;UBERON:0001004!9.18e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.45e-25,23;UBERON:0000974,2.45e-25,23;UBERON:0004807,2.45e-25,23;UBERON:0005058,2.45e-25,23;UBERON:0003351,2.45e-25,23;UBERON:0009113,2.45e-25,23;UBERON:0003295,2.45e-25,23;UBERON:0009722,2.45e-25,23;UBERON:0005562,2.45e-25,23;UBERON:0007690,2.45e-25,23;UBERON:0006562,4.57e-24,24;UBERON:0003408,4.57e-24,24;UBERON:0001557,4.57e-24,24;UBERON:0001042,4.57e-24,24;UBERON:0008814,4.57e-24,24;UBERON:0009145,4.57e-24,24;UBERON:0000072,8.01e-21,27;UBERON:0000153,1.26e-20,43;UBERON:0004177,4.90e-19,29;UBERON:0005057,4.90e-19,29;UBERON:0007811,4.92e-16,36;UBERON:0000077,6.51e-15,35;UBERON:0000065,5.16e-12,41;UBERON:0001004,1.30e-11,42;UBERON:0002368,1.53e-10,60;UBERON:0002390,1.61e-10,45;UBERON:0003061,1.61e-10,45;UBERON:0002193,1.44e-09,48;UBERON:0002405,1.44e-09,48;UBERON:0002530,2.68e-09,65;UBERON:0003929,9.76e-09,55;UBERON:0003081,6.92e-08,87;UBERON:0000949,7.36e-08,72;UBERON:0000490,2.57e-07,66
|phase1_expression=1.44133962394315,0,0,0,0,0,0,4.00282302668886,2.39340827657833,4.68129052643987,0.171217968225505,0.239316476986009,6.84802919724823,7.69299541287177,0,0.404950534779652,0,0.473193248037357,0.548457734422955,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,9.42970784614748,11.0910953717013,0,0,0,2.02316460859598,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0,0,0.220868540951614,0,0.191690942036473,0,0,1.78762273319263,1.38245879930619,1.97829431595291,2.28719109006024,1.04182674111352,0.279182999001381,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,1.04853447583376,0,0,0.347648640384553,0.255715457330331,1.87009240103604,0.324482526135515,0.407357455401265,0.248813941220186,2.27450482590307,0,0.910843100738926,0.459804208866946,0.360124259610698,0.30140963567143,0,0,0,0.258703370739016,2.15567992932842,1.70195472151037,1.58356011747554,0.876782929710299,0.556094498451196,1.0447564995665,1.23469281844766,2.18937693500343,0,0,0,1.44988040774851,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.617427674275707,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.569003702859245,0.799739588268102,0,0.610953983535943,0.193952487167626,0.49095073923223,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.494910368917606,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,1.44048875225048,1.29358683782755,0.643011105094777,1.24138163549592,0.356737635204141,0.658196082408484,0.608929898229199,0.469343416127421,0,0,1.48397627647332,0.807322133479528,2.35220407219808,2.50681922406587,2.29797259643086,0.291480836629851,0.370850604021019,0.512612642393558,0,0.555583582109135,0.565105371014073,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.138199973804424,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.448549638131936,0.496375471371293,0,0.129159823477731,0,0,0,0.104859344425711,0,0,8.21628913633263,1.01362607645082,2.67048488628551,5.97635785697857,8.05620130503666,9.13934231993819,6.37035882455835,8.12292399460175,6.05798699688886,6.55378537232999,9.98179232854721,7.89408833991995,6.73482891482306,9.23327527234395,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,1.3492355185943,1.19707462020309,0.512200817262403,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.631790158511746,0.476293691283074,0.927074607558844,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.752875043322645,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,0,0.474540072496697,0.197008964751127,0,0.464810523557898,0,0.499621155875892,0.701794825336225,0.644613162144895,0.191288332068843,0.661774257358546,0.695603506861264
|short_description=p4@Lef1
}}

Revision as of 01:02, 6 August 2015

Short description:p4@Lef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lef1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: -125bp_to_ENSMUST00000029611, ENSMUST00000066849, ENSMUST00000106341, NM_010703, uc008rjf.1, uc008rjg.1_5end
EntrezGene:16842
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.69
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C55.98
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G49.14
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C46.06
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E49.98
thymus, neonate N20.CNhs11186.820-7A27.89
thymus, neonate N25.CNhs11125.1362-25G76.73
thymus, neonate N30.CNhs11132.1393-42G29.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus2.45e-2523
neck2.45e-2523
respiratory system epithelium2.45e-2523
hemolymphoid system gland2.45e-2523
pharyngeal epithelium2.45e-2523
thymic region2.45e-2523
pharyngeal gland2.45e-2523
entire pharyngeal arch endoderm2.45e-2523
thymus primordium2.45e-2523
early pharyngeal endoderm2.45e-2523
pharynx4.57e-2424
gland of gut4.57e-2424
upper respiratory tract4.57e-2424
chordate pharynx4.57e-2424
pharyngeal arch system4.57e-2424
pharyngeal region of foregut4.57e-2424
segment of respiratory tract8.01e-2127
anterior region of body1.26e-2043
hemopoietic organ4.90e-1929
immune organ4.90e-1929
craniocervical region4.92e-1636
mixed endoderm/mesoderm-derived structure6.51e-1535
respiratory tract5.16e-1241
respiratory system1.30e-1142
endocrine gland1.53e-1060
hematopoietic system1.61e-1045
blood island1.61e-1045
hemolymphoid system1.44e-0948
immune system1.44e-0948
gland2.68e-0965
gut epithelium9.76e-0955
lateral plate mesoderm6.92e-0887
endocrine system7.36e-0872
unilaminar epithelium2.57e-0766
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