FFCP PHASE1:Mm9::chr6:6812839..6812856,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1831|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:6812839..6812856,-|id=chr6:6812839..6812856,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002608,3.64e-14,3;CL:0002613,1.45e-13,3;CL:0000117,1.71e-08,23;CL:0000337,1.71e-08,23;CL:0002609,2.62e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!5.99e-14!29;UBERON:0003528!5.99e-14!29;UBERON:0001893!5.99e-14!29;UBERON:0002780!5.19e-13!39;UBERON:0001890!5.19e-13!39;UBERON:0006240!5.19e-13!39;UBERON:0003080!1.80e-12!40;UBERON:0000955!3.42e-12!50;UBERON:0006238!3.42e-12!50;UBERON:0002616!2.34e-11!49;UBERON:0002020!8.20e-11!34;UBERON:0003056!4.44e-10!49;UBERON:0000956!7.24e-10!21;UBERON:0001869!7.24e-10!21;UBERON:0000203!7.24e-10!21;UBERON:0002619!5.60e-09!17;UBERON:0000033!5.64e-09!63;UBERON:0001049!1.02e-07!52;UBERON:0005068!1.02e-07!52;UBERON:0006241!1.02e-07!52;UBERON:0007135!1.02e-07!52;UBERON:0000369!4.64e-07!5;UBERON:0002435!4.64e-07!5;UBERON:0000204!4.64e-07!5;UBERON:0010082!4.64e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.26e-21,5;UBERON:0002435,1.26e-21,5;UBERON:0000204,1.26e-21,5;UBERON:0010082,1.26e-21,5;UBERON:0002420,1.81e-13,8;UBERON:0007245,1.81e-13,8;UBERON:0010009,1.81e-13,8;UBERON:0010011,1.81e-13,8;UBERON:0000454,1.81e-13,8;UBERON:0003528,2.14e-13,29;UBERON:0002791,2.14e-13,29;UBERON:0001893,2.14e-13,29;UBERON:0002780,1.55e-11,39;UBERON:0001890,1.55e-11,39;UBERON:0006240,1.55e-11,39;UBERON:0000955,3.32e-11,47;UBERON:0006238,3.32e-11,47;UBERON:0003080,3.33e-11,40;UBERON:0002020,3.40e-11,34;UBERON:0002616,1.65e-09,46;UBERON:0000073,2.28e-09,54;UBERON:0003056,8.13e-09,49;UBERON:0001049,3.33e-08,52;UBERON:0005068,3.33e-08,52;UBERON:0006241,3.33e-08,52;UBERON:0007135,3.33e-08,52;UBERON:0001017,1.04e-07,73;UBERON:0001016,1.92e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,3.55223317723367,5.84657373211242,8.27296907949019,1.10115880999389,0.127687338085188,0.307213066512487,1.84640802822271,3.11057988248193,4.16730696445408,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,1.83000241127451,6.15706325353036,0.695297280769106,0.767146371990992,1.0389402227978,0.973447578406546,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,5.78378369559253,0.283880170416537,0,0,1.31976098378028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.428674070063185,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,11.2738587736838,0,0,0,0,0,0,0,0,0.483168241652012,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,4.39563898241436,0.643105137237198,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,1.35004500046361,0,0.906284817968409,0.51776031175182,0.62272408550506,1.19707462020309,0.853668028770671,0.243106717068294,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,0.64183841918363,0,0.50695859978048,0.754505365544305,0.561849044819294,0.256100609619477,0.34461281373368,0,0.347652977834566,0.38581844092741,0.412085900803307,0.735994600671987,1.37147700954166,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.771626443924566,0.999242311751784,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p@chr6:6812839..6812856,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1831 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:6812839..6812856,- | |||
|description=CAGE_peak_at_chr6:6812839..6812856,- | |||
|id=chr6:6812839..6812856,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,3.64e-14,3;CL:0002613,1.45e-13,3;CL:0000117,1.71e-08,23;CL:0000337,1.71e-08,23;CL:0002609,2.62e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!5.99e-14!29;UBERON:0003528!5.99e-14!29;UBERON:0001893!5.99e-14!29;UBERON:0002780!5.19e-13!39;UBERON:0001890!5.19e-13!39;UBERON:0006240!5.19e-13!39;UBERON:0003080!1.80e-12!40;UBERON:0000955!3.42e-12!50;UBERON:0006238!3.42e-12!50;UBERON:0002616!2.34e-11!49;UBERON:0002020!8.20e-11!34;UBERON:0003056!4.44e-10!49;UBERON:0000956!7.24e-10!21;UBERON:0001869!7.24e-10!21;UBERON:0000203!7.24e-10!21;UBERON:0002619!5.60e-09!17;UBERON:0000033!5.64e-09!63;UBERON:0001049!1.02e-07!52;UBERON:0005068!1.02e-07!52;UBERON:0006241!1.02e-07!52;UBERON:0007135!1.02e-07!52;UBERON:0000369!4.64e-07!5;UBERON:0002435!4.64e-07!5;UBERON:0000204!4.64e-07!5;UBERON:0010082!4.64e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.26e-21,5;UBERON:0002435,1.26e-21,5;UBERON:0000204,1.26e-21,5;UBERON:0010082,1.26e-21,5;UBERON:0002420,1.81e-13,8;UBERON:0007245,1.81e-13,8;UBERON:0010009,1.81e-13,8;UBERON:0010011,1.81e-13,8;UBERON:0000454,1.81e-13,8;UBERON:0003528,2.14e-13,29;UBERON:0002791,2.14e-13,29;UBERON:0001893,2.14e-13,29;UBERON:0002780,1.55e-11,39;UBERON:0001890,1.55e-11,39;UBERON:0006240,1.55e-11,39;UBERON:0000955,3.32e-11,47;UBERON:0006238,3.32e-11,47;UBERON:0003080,3.33e-11,40;UBERON:0002020,3.40e-11,34;UBERON:0002616,1.65e-09,46;UBERON:0000073,2.28e-09,54;UBERON:0003056,8.13e-09,49;UBERON:0001049,3.33e-08,52;UBERON:0005068,3.33e-08,52;UBERON:0006241,3.33e-08,52;UBERON:0007135,3.33e-08,52;UBERON:0001017,1.04e-07,73;UBERON:0001016,1.92e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,3.55223317723367,5.84657373211242,8.27296907949019,1.10115880999389,0.127687338085188,0.307213066512487,1.84640802822271,3.11057988248193,4.16730696445408,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,1.83000241127451,6.15706325353036,0.695297280769106,0.767146371990992,1.0389402227978,0.973447578406546,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,5.78378369559253,0.283880170416537,0,0,1.31976098378028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.428674070063185,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,11.2738587736838,0,0,0,0,0,0,0,0,0.483168241652012,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,4.39563898241436,0.643105137237198,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,1.35004500046361,0,0.906284817968409,0.51776031175182,0.62272408550506,1.19707462020309,0.853668028770671,0.243106717068294,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,0.64183841918363,0,0.50695859978048,0.754505365544305,0.561849044819294,0.256100609619477,0.34461281373368,0,0.347652977834566,0.38581844092741,0.412085900803307,0.735994600671987,1.37147700954166,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.771626443924566,0.999242311751784,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr6:6812839..6812856,- | |||
}} |
Latest revision as of 01:17, 6 August 2015
Short description: | p@chr6:6812839..6812856, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:6812839..6812856, - |
Coexpression cluster: | MCL_coexpression_mm9:1831 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 3.64e-14 | 3 |
striatum neuron | 1.45e-13 | 3 |
CNS neuron (sensu Vertebrata) | 1.71e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-08 | 23 |
neuron of cerebral cortex | 2.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.26e-21 | 5 |
striatum | 1.26e-21 | 5 |
ventral part of telencephalon | 1.26e-21 | 5 |
future corpus striatum | 1.26e-21 | 5 |
basal ganglion | 1.81e-13 | 8 |
nuclear complex of neuraxis | 1.81e-13 | 8 |
aggregate regional part of brain | 1.81e-13 | 8 |
collection of basal ganglia | 1.81e-13 | 8 |
cerebral subcortex | 1.81e-13 | 8 |
brain grey matter | 2.14e-13 | 29 |
regional part of telencephalon | 2.14e-13 | 29 |
telencephalon | 2.14e-13 | 29 |
regional part of forebrain | 1.55e-11 | 39 |
forebrain | 1.55e-11 | 39 |
future forebrain | 1.55e-11 | 39 |
brain | 3.32e-11 | 47 |
future brain | 3.32e-11 | 47 |
anterior neural tube | 3.33e-11 | 40 |
gray matter | 3.40e-11 | 34 |
regional part of brain | 1.65e-09 | 46 |
regional part of nervous system | 2.28e-09 | 54 |
pre-chordal neural plate | 8.13e-09 | 49 |
neural tube | 3.33e-08 | 52 |
neural rod | 3.33e-08 | 52 |
future spinal cord | 3.33e-08 | 52 |
neural keel | 3.33e-08 | 52 |
central nervous system | 1.04e-07 | 73 |
nervous system | 1.92e-07 | 75 |