FFCP PHASE1:Mm9::chr11:66770199..66770206,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=126|UniProt=|association_with_transcript=44bp_to_ENSMUST00000150220_5end|description=CAGE_peak_6_at_ENSMUST00000150220_5end|id=chr11:66770199..66770206,+|ontology_enrichment_celltype=CL:0002563!1.29e-14!9;CL:0002251!1.29e-14!9;CL:0000239!9.92e-11!6;CL:0000677!9.92e-11!6;CL:0000212!9.92e-11!6;CL:0000584!9.92e-11!6;CL:0000075!4.66e-09!7;CL:0002076!5.68e-08!15;CL:0000066!6.84e-08!25|ontology_enrichment_celltype_v019_2=CL:0000239,6.63e-17,6;CL:0000677,6.63e-17,6;CL:0000584,6.63e-17,6;CL:0002563,1.12e-14,9;CL:0002251,1.12e-14,9;CL:0000075,2.08e-14,7;CL:0000682,3.32e-10,3;CL:0000066,5.41e-10,25;CL:0002076,1.92e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.01e-25!15;UBERON:0005409!5.21e-24!59;UBERON:0000160!8.43e-22!43;UBERON:0001242!1.01e-21!13;UBERON:0000060!1.01e-21!13;UBERON:0001262!1.01e-21!13;UBERON:0004786!1.01e-21!13;UBERON:0004923!4.08e-18!24;UBERON:0003350!1.29e-14!9;UBERON:0004808!1.29e-14!9;UBERON:0001277!1.29e-14!9;UBERON:0000485!1.37e-11!11;UBERON:0004119!1.20e-10!130;UBERON:0000925!1.20e-10!130;UBERON:0006595!1.20e-10!130;UBERON:0001007!4.39e-10!128;UBERON:0001555!4.39e-10!128;UBERON:0007026!4.39e-10!128;UBERON:0004921!1.15e-08!126;UBERON:0004185!1.15e-08!126;UBERON:0000331!5.18e-07!3;UBERON:0002116!5.18e-07!3;UBERON:0001204!5.18e-07!3;UBERON:0001168!5.18e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.59e-31,15;UBERON:0000160,6.04e-31,31;UBERON:0001242,6.71e-26,13;UBERON:0001262,6.71e-26,13;UBERON:0004786,6.71e-26,13;UBERON:0005409,1.73e-23,47;UBERON:0004923,1.85e-21,24;UBERON:0003350,1.12e-14,9;UBERON:0004808,1.12e-14,9;UBERON:0001277,1.12e-14,9;UBERON:0002108,3.69e-13,4;UBERON:0000485,7.62e-12,11;UBERON:0000331,1.08e-10,3;UBERON:0002116,1.08e-10,3;UBERON:0001204,1.08e-10,3;UBERON:0001168,1.08e-10,3;UBERON:0004119,1.25e-10,118;UBERON:0000925,1.25e-10,118;UBERON:0006595,1.25e-10,118;UBERON:0001007,8.34e-10,116;UBERON:0001555,8.34e-10,116;UBERON:0007026,8.34e-10,116;UBERON:0004921,5.78e-08,114;UBERON:0001962,7.42e-07,2;UBERON:0001961,7.42e-07,2;UBERON:0001744,7.42e-07,2|phase1_expression=0,8.72438519098403,5.45999087267443,3.0246421130683,3.00537437967808,1.84667199103079,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,4.5881856213434,6.31655160526522,5.59990595006797,7.97243560937789,20.332505881832,13.1055667475164,8.86922042621219,0,0,0,1.44425809875637,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,4.29628689337247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,4.23120906661671,0,0,0,0.201683524623343,0.22237804384487,0,7.59246498471219,0.494096864172033,0.502670417600539,1.59165177632921,0.58489226135736,4.49409704327111,5.83572734661674,4.38110801159608,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05073220482823,0,0.220528398054962,0.16488625294148,0,0.120625849856312,0.596861720015682,0.820704498725306,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.578574190077352,1.30877970992015,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,2.31827512838629,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@ENSMUST00000150220}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=44bp_to_ENSMUST00000150220_5end | |||
|cluster_id=chr11:66770199..66770206,+ | |||
|description=CAGE_peak_6_at_ENSMUST00000150220_5end | |||
|id=chr11:66770199..66770206,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.29e-14!9;CL:0002251!1.29e-14!9;CL:0000239!9.92e-11!6;CL:0000677!9.92e-11!6;CL:0000212!9.92e-11!6;CL:0000584!9.92e-11!6;CL:0000075!4.66e-09!7;CL:0002076!5.68e-08!15;CL:0000066!6.84e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.63e-17,6;CL:0000677,6.63e-17,6;CL:0000584,6.63e-17,6;CL:0002563,1.12e-14,9;CL:0002251,1.12e-14,9;CL:0000075,2.08e-14,7;CL:0000682,3.32e-10,3;CL:0000066,5.41e-10,25;CL:0002076,1.92e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.01e-25!15;UBERON:0005409!5.21e-24!59;UBERON:0000160!8.43e-22!43;UBERON:0001242!1.01e-21!13;UBERON:0000060!1.01e-21!13;UBERON:0001262!1.01e-21!13;UBERON:0004786!1.01e-21!13;UBERON:0004923!4.08e-18!24;UBERON:0003350!1.29e-14!9;UBERON:0004808!1.29e-14!9;UBERON:0001277!1.29e-14!9;UBERON:0000485!1.37e-11!11;UBERON:0004119!1.20e-10!130;UBERON:0000925!1.20e-10!130;UBERON:0006595!1.20e-10!130;UBERON:0001007!4.39e-10!128;UBERON:0001555!4.39e-10!128;UBERON:0007026!4.39e-10!128;UBERON:0004921!1.15e-08!126;UBERON:0004185!1.15e-08!126;UBERON:0000331!5.18e-07!3;UBERON:0002116!5.18e-07!3;UBERON:0001204!5.18e-07!3;UBERON:0001168!5.18e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.59e-31,15;UBERON:0000160,6.04e-31,31;UBERON:0001242,6.71e-26,13;UBERON:0001262,6.71e-26,13;UBERON:0004786,6.71e-26,13;UBERON:0005409,1.73e-23,47;UBERON:0004923,1.85e-21,24;UBERON:0003350,1.12e-14,9;UBERON:0004808,1.12e-14,9;UBERON:0001277,1.12e-14,9;UBERON:0002108,3.69e-13,4;UBERON:0000485,7.62e-12,11;UBERON:0000331,1.08e-10,3;UBERON:0002116,1.08e-10,3;UBERON:0001204,1.08e-10,3;UBERON:0001168,1.08e-10,3;UBERON:0004119,1.25e-10,118;UBERON:0000925,1.25e-10,118;UBERON:0006595,1.25e-10,118;UBERON:0001007,8.34e-10,116;UBERON:0001555,8.34e-10,116;UBERON:0007026,8.34e-10,116;UBERON:0004921,5.78e-08,114;UBERON:0001962,7.42e-07,2;UBERON:0001961,7.42e-07,2;UBERON:0001744,7.42e-07,2 | |||
|phase1_expression=0,8.72438519098403,5.45999087267443,3.0246421130683,3.00537437967808,1.84667199103079,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,4.5881856213434,6.31655160526522,5.59990595006797,7.97243560937789,20.332505881832,13.1055667475164,8.86922042621219,0,0,0,1.44425809875637,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,4.29628689337247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,4.23120906661671,0,0,0,0.201683524623343,0.22237804384487,0,7.59246498471219,0.494096864172033,0.502670417600539,1.59165177632921,0.58489226135736,4.49409704327111,5.83572734661674,4.38110801159608,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05073220482823,0,0.220528398054962,0.16488625294148,0,0.120625849856312,0.596861720015682,0.820704498725306,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.578574190077352,1.30877970992015,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,2.31827512838629,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ENSMUST00000150220 | |||
}} |
Latest revision as of 07:55, 6 August 2015
Short description: | p6@ENSMUST00000150220 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ENSMUST00000150220_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 44bp_to_ENSMUST00000150220_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.63e-17 | 6 |
gut absorptive cell | 6.63e-17 | 6 |
enterocyte | 6.63e-17 | 6 |
intestinal epithelial cell | 1.12e-14 | 9 |
epithelial cell of alimentary canal | 1.12e-14 | 9 |
columnar/cuboidal epithelial cell | 2.08e-14 | 7 |
M cell of gut | 3.32e-10 | 3 |
epithelial cell | 5.41e-10 | 25 |
endo-epithelial cell | 1.92e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.59e-31 | 15 |
intestine | 6.04e-31 | 31 |
intestinal mucosa | 6.71e-26 | 13 |
wall of intestine | 6.71e-26 | 13 |
gastrointestinal system mucosa | 6.71e-26 | 13 |
gastrointestinal system | 1.73e-23 | 47 |
organ component layer | 1.85e-21 | 24 |
epithelium of mucosa | 1.12e-14 | 9 |
gastrointestinal system epithelium | 1.12e-14 | 9 |
intestinal epithelium | 1.12e-14 | 9 |
small intestine | 3.69e-13 | 4 |
simple columnar epithelium | 7.62e-12 | 11 |
ileal mucosa | 1.08e-10 | 3 |
ileum | 1.08e-10 | 3 |
mucosa of small intestine | 1.08e-10 | 3 |
wall of small intestine | 1.08e-10 | 3 |
endoderm-derived structure | 1.25e-10 | 118 |
endoderm | 1.25e-10 | 118 |
presumptive endoderm | 1.25e-10 | 118 |
digestive system | 8.34e-10 | 116 |
digestive tract | 8.34e-10 | 116 |
primitive gut | 8.34e-10 | 116 |
subdivision of digestive tract | 5.78e-08 | 114 |
gut-associated lymphoid tissue | 7.42e-07 | 2 |
mucosa-associated lymphoid tissue | 7.42e-07 | 2 |
lymphoid tissue | 7.42e-07 | 2 |