FFCP PHASE1:Mm9::chr16:41533188..41533206,+: Difference between revisions
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{{FFCP|EntrezGene=268890|HGNC=|MCL_coexpression_id=1|UniProt=Q3TYE5|association_with_transcript=38bp_to_ENSMUST00000099761_5end|description=CAGE_peak_9_at_Lsamp_5end|id=chr16:41533188..41533206,+|ontology_enrichment_celltype=CL:0000117!2.66e-20!23;CL:0000337!2.66e-20!23;CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0000221!1.65e-08!44;CL:0000133!1.65e-08!44;CL:0002319!5.30e-08!43|ontology_enrichment_celltype_v019_2=CL:0002610,1.47e-10,3;CL:0002614,3.10e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.31e-35!63;UBERON:0001049!3.52e-29!52;UBERON:0005068!3.52e-29!52;UBERON:0006241!3.52e-29!52;UBERON:0007135!3.52e-29!52;UBERON:0000955!6.57e-28!50;UBERON:0006238!6.57e-28!50;UBERON:0004121!1.10e-27!102;UBERON:0000924!1.10e-27!102;UBERON:0006601!1.10e-27!102;UBERON:0001017!3.93e-27!73;UBERON:0005743!3.93e-27!73;UBERON:0002020!5.85e-27!34;UBERON:0002616!6.40e-27!49;UBERON:0002346!3.58e-26!71;UBERON:0003075!3.58e-26!71;UBERON:0007284!3.58e-26!71;UBERON:0000073!6.21e-26!75;UBERON:0001016!6.21e-26!75;UBERON:0003056!1.12e-24!49;UBERON:0002791!1.59e-22!29;UBERON:0003528!1.59e-22!29;UBERON:0001893!1.59e-22!29;UBERON:0003080!7.90e-21!40;UBERON:0007811!1.11e-20!86;UBERON:0002780!9.11e-20!39;UBERON:0001890!9.11e-20!39;UBERON:0006240!9.11e-20!39;UBERON:0000153!2.16e-18!94;UBERON:0000956!4.13e-16!21;UBERON:0001869!4.13e-16!21;UBERON:0000203!4.13e-16!21;UBERON:0002619!7.50e-13!17;UBERON:0002021!3.16e-11!10;UBERON:0000411!3.16e-11!10;UBERON:0001950!3.16e-11!10;UBERON:0004111!7.07e-09!122;UBERON:0003076!8.94e-09!12;UBERON:0003057!8.94e-09!12;UBERON:0002298!1.11e-07!6;UBERON:0000025!1.30e-07!114;UBERON:0002420!1.52e-07!8;UBERON:0007245!1.52e-07!8;UBERON:0010009!1.52e-07!8;UBERON:0010011!1.52e-07!8;UBERON:0000454!1.52e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-36,54;UBERON:0000955,2.48e-32,47;UBERON:0006238,2.48e-32,47;UBERON:0001049,1.09e-31,52;UBERON:0005068,1.09e-31,52;UBERON:0006241,1.09e-31,52;UBERON:0007135,1.09e-31,52;UBERON:0002616,2.83e-30,46;UBERON:0001017,3.26e-30,73;UBERON:0001016,2.85e-29,75;UBERON:0002346,7.74e-25,64;UBERON:0003075,7.74e-25,64;UBERON:0007284,7.74e-25,64;UBERON:0003080,9.05e-23,40;UBERON:0002021,1.00e-22,10;UBERON:0000411,1.00e-22,10;UBERON:0001950,1.00e-22,10;UBERON:0003528,1.63e-22,29;UBERON:0002791,1.63e-22,29;UBERON:0001893,1.63e-22,29;UBERON:0004121,5.03e-22,95;UBERON:0000924,5.03e-22,95;UBERON:0006601,5.03e-22,95;UBERON:0002020,3.00e-21,34;UBERON:0010371,3.58e-21,73;UBERON:0002780,1.10e-20,39;UBERON:0001890,1.10e-20,39;UBERON:0006240,1.10e-20,39;UBERON:0002619,8.10e-19,17;UBERON:0003056,7.31e-18,49;UBERON:0000956,8.48e-18,21;UBERON:0001869,8.48e-18,21;UBERON:0000203,8.48e-18,21;UBERON:0010314,8.82e-16,92;UBERON:0002950,3.54e-12,4;UBERON:0001891,3.54e-12,4;UBERON:0009616,3.54e-12,4;UBERON:0010286,3.54e-12,4;UBERON:0000025,8.98e-12,114;UBERON:0004111,1.13e-10,122;UBERON:0004684,1.47e-10,3;UBERON:0002275,1.47e-10,3;UBERON:0002038,3.10e-09,3;UBERON:0009663,3.10e-09,3;UBERON:0009661,3.10e-09,3;UBERON:0000125,3.10e-09,3;UBERON:0002308,3.10e-09,3;UBERON:0003076,3.23e-09,12;UBERON:0003057,3.23e-09,12;UBERON:0004733,4.14e-09,6;UBERON:0004732,4.14e-09,6;UBERON:0002028,4.14e-09,6;UBERON:0007277,4.14e-09,6;UBERON:0011216,4.82e-08,194;UBERON:0001896,1.78e-07,2;UBERON:0002298,1.78e-07,2;UBERON:0005290,1.78e-07,2;UBERON:0010096,1.78e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.630974884054146,1.42825492201902,0.883474163806454,0.857435594504678,0.383381884072945,0.919218786610021,5.50579404996943,3.70293280447044,4.45458946443106,0.263772575460388,0.182975287204819,0.52091337055676,1.3959149950069,2.25105044012672,3.66715794664344,0.589257170947335,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73395833126558,4.60782754989601,0,0,0,0,4.34392854273986,2.74500361691176,0.502617408451458,2.78118912307642,2.30143911597297,2.90903262383384,2.92034273521964,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.540186389416048,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,1.47202963994889,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,5.377333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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268890 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TYE5 | |||
|association_with_transcript=38bp_to_ENSMUST00000099761_5end | |||
|cluster_id=chr16:41533188..41533206,+ | |||
|description=CAGE_peak_9_at_Lsamp_5end | |||
|id=chr16:41533188..41533206,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.66e-20!23;CL:0000337!2.66e-20!23;CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0000221!1.65e-08!44;CL:0000133!1.65e-08!44;CL:0002319!5.30e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.47e-10,3;CL:0002614,3.10e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.31e-35!63;UBERON:0001049!3.52e-29!52;UBERON:0005068!3.52e-29!52;UBERON:0006241!3.52e-29!52;UBERON:0007135!3.52e-29!52;UBERON:0000955!6.57e-28!50;UBERON:0006238!6.57e-28!50;UBERON:0004121!1.10e-27!102;UBERON:0000924!1.10e-27!102;UBERON:0006601!1.10e-27!102;UBERON:0001017!3.93e-27!73;UBERON:0005743!3.93e-27!73;UBERON:0002020!5.85e-27!34;UBERON:0002616!6.40e-27!49;UBERON:0002346!3.58e-26!71;UBERON:0003075!3.58e-26!71;UBERON:0007284!3.58e-26!71;UBERON:0000073!6.21e-26!75;UBERON:0001016!6.21e-26!75;UBERON:0003056!1.12e-24!49;UBERON:0002791!1.59e-22!29;UBERON:0003528!1.59e-22!29;UBERON:0001893!1.59e-22!29;UBERON:0003080!7.90e-21!40;UBERON:0007811!1.11e-20!86;UBERON:0002780!9.11e-20!39;UBERON:0001890!9.11e-20!39;UBERON:0006240!9.11e-20!39;UBERON:0000153!2.16e-18!94;UBERON:0000956!4.13e-16!21;UBERON:0001869!4.13e-16!21;UBERON:0000203!4.13e-16!21;UBERON:0002619!7.50e-13!17;UBERON:0002021!3.16e-11!10;UBERON:0000411!3.16e-11!10;UBERON:0001950!3.16e-11!10;UBERON:0004111!7.07e-09!122;UBERON:0003076!8.94e-09!12;UBERON:0003057!8.94e-09!12;UBERON:0002298!1.11e-07!6;UBERON:0000025!1.30e-07!114;UBERON:0002420!1.52e-07!8;UBERON:0007245!1.52e-07!8;UBERON:0010009!1.52e-07!8;UBERON:0010011!1.52e-07!8;UBERON:0000454!1.52e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-36,54;UBERON:0000955,2.48e-32,47;UBERON:0006238,2.48e-32,47;UBERON:0001049,1.09e-31,52;UBERON:0005068,1.09e-31,52;UBERON:0006241,1.09e-31,52;UBERON:0007135,1.09e-31,52;UBERON:0002616,2.83e-30,46;UBERON:0001017,3.26e-30,73;UBERON:0001016,2.85e-29,75;UBERON:0002346,7.74e-25,64;UBERON:0003075,7.74e-25,64;UBERON:0007284,7.74e-25,64;UBERON:0003080,9.05e-23,40;UBERON:0002021,1.00e-22,10;UBERON:0000411,1.00e-22,10;UBERON:0001950,1.00e-22,10;UBERON:0003528,1.63e-22,29;UBERON:0002791,1.63e-22,29;UBERON:0001893,1.63e-22,29;UBERON:0004121,5.03e-22,95;UBERON:0000924,5.03e-22,95;UBERON:0006601,5.03e-22,95;UBERON:0002020,3.00e-21,34;UBERON:0010371,3.58e-21,73;UBERON:0002780,1.10e-20,39;UBERON:0001890,1.10e-20,39;UBERON:0006240,1.10e-20,39;UBERON:0002619,8.10e-19,17;UBERON:0003056,7.31e-18,49;UBERON:0000956,8.48e-18,21;UBERON:0001869,8.48e-18,21;UBERON:0000203,8.48e-18,21;UBERON:0010314,8.82e-16,92;UBERON:0002950,3.54e-12,4;UBERON:0001891,3.54e-12,4;UBERON:0009616,3.54e-12,4;UBERON:0010286,3.54e-12,4;UBERON:0000025,8.98e-12,114;UBERON:0004111,1.13e-10,122;UBERON:0004684,1.47e-10,3;UBERON:0002275,1.47e-10,3;UBERON:0002038,3.10e-09,3;UBERON:0009663,3.10e-09,3;UBERON:0009661,3.10e-09,3;UBERON:0000125,3.10e-09,3;UBERON:0002308,3.10e-09,3;UBERON:0003076,3.23e-09,12;UBERON:0003057,3.23e-09,12;UBERON:0004733,4.14e-09,6;UBERON:0004732,4.14e-09,6;UBERON:0002028,4.14e-09,6;UBERON:0007277,4.14e-09,6;UBERON:0011216,4.82e-08,194;UBERON:0001896,1.78e-07,2;UBERON:0002298,1.78e-07,2;UBERON:0005290,1.78e-07,2;UBERON:0010096,1.78e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.630974884054146,1.42825492201902,0.883474163806454,0.857435594504678,0.383381884072945,0.919218786610021,5.50579404996943,3.70293280447044,4.45458946443106,0.263772575460388,0.182975287204819,0.52091337055676,1.3959149950069,2.25105044012672,3.66715794664344,0.589257170947335,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73395833126558,4.60782754989601,0,0,0,0,4.34392854273986,2.74500361691176,0.502617408451458,2.78118912307642,2.30143911597297,2.90903262383384,2.92034273521964,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.540186389416048,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,1.47202963994889,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,4.14292712856459,2.86447756719698,2.92150409984269,1.37016503954128,0.755393897389701,1.35004500046361,4.05289082901798,2.26571204492102,2.5888015587591,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0,0.256100609619477,0,0.476293691283074,0.231768651889711,0,0,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p9@Lsamp | |||
}} |
Revision as of 10:40, 6 August 2015
Short description: | p9@Lsamp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Lsamp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 38bp_to_ENSMUST00000099761_5end |
EntrezGene: | 268890 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.47e-10 | 3 |
neuron of the substantia nigra | 3.10e-09 | 3 |