FFCP PHASE2:Hg19::chr4:152020789..152020800,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6189 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10421 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10421 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=D6RAS7,E9PFI5 | ||
|association_with_transcript=0bp_to_ENST00000508783,ENST00000512690_5end | |association_with_transcript=0bp_to_ENST00000508783,ENST00000512690_5end | ||
|cluster_id=chr4:152020789..152020800,+ | |cluster_id=chr4:152020789..152020800,+ | ||
Latest revision as of 02:26, 16 September 2015
| Short description: | p3@RPS3A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_RPS3A_5end |
| Coexpression cluster: | C270_CD4_Fibroblast_acute_iPS_Aortic_CD34_Smooth |
| Association with transcript: | 0bp_to_ENST00000508783, ENST00000512690_5end |
| EntrezGene: | RPS3A |
| HGNC: | 10421 |
| UniProt: | D6RAS7E9PFI5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@RPS3A |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 5.68e-30 | 42 |
| CD14-positive, CD16-negative classical monocyte | 5.68e-30 | 42 |
| defensive cell | 7.11e-28 | 48 |
| phagocyte | 7.11e-28 | 48 |
| granulocyte monocyte progenitor cell | 3.11e-24 | 67 |
| myeloid lineage restricted progenitor cell | 1.17e-23 | 66 |
| myeloid cell | 2.21e-23 | 108 |
| common myeloid progenitor | 2.21e-23 | 108 |
| myeloid leukocyte | 3.95e-23 | 72 |
| leukocyte | 4.57e-23 | 136 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 4.08e-22 | 76 |
| skeletal element | 7.52e-20 | 90 |
| bone element | 1.94e-19 | 82 |
| immune system | 1.80e-18 | 93 |
| skeletal system | 2.28e-16 | 100 |
| hematopoietic system | 6.24e-15 | 98 |
| blood island | 6.24e-15 | 98 |
| hemolymphoid system | 6.94e-14 | 108 |
| larynx | 7.97e-12 | 9 |
| musculoskeletal system | 1.79e-09 | 167 |
Showing 1 to 10 of 10 entries
