FFCP PHASE1:Hg19::chr20:388056..388067,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=15864 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5JWR1 | ||
|association_with_transcript=-74bp_to_ENST00000411647_5end | |association_with_transcript=-74bp_to_ENST00000411647_5end | ||
|cluster_id=chr20:388056..388067,+ | |cluster_id=chr20:388056..388067,+ |
Latest revision as of 04:52, 16 September 2015
Short description: | p10@RBCK1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RBCK1_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -74bp_to_ENST00000411647_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | Q5JWR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@RBCK1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of stomach | 2.07e-12 | 3 |
keratinocyte | 7.01e-08 | 5 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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rectum | 1.70e-09 | 4 |
lower digestive tract | 7.49e-08 | 5 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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gastrointestinal system cancer | 1.99e-10 | 14 |
cervical cancer | 6.55e-08 | 5 |
Showing 1 to 2 of 2 entries