FFCP PHASE2:Hg19::chr10:105881906..105881935,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:119392 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29574 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=119392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29574 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q86XK3 | ||
|association_with_transcript=0bp_to_ENST00000369727,NM_001002759,uc001kxu.2_5end | |association_with_transcript=0bp_to_ENST00000369727,NM_001002759,uc001kxu.2_5end | ||
|cluster_id=chr10:105881906..105881935,+ | |cluster_id=chr10:105881906..105881935,+ |
Latest revision as of 05:24, 16 September 2015
Short description: | p1@SFR1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000369727, NM_001002759, uc001kxu.2_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | Q86XK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SFR1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.68e-20 | 120 |
hematopoietic stem cell | 5.63e-20 | 168 |
hematopoietic oligopotent progenitor cell | 7.86e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.86e-20 | 161 |
leukocyte | 3.11e-18 | 136 |
nongranular leukocyte | 1.01e-17 | 115 |
hematopoietic cell | 6.07e-17 | 177 |
classical monocyte | 7.15e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.15e-12 | 42 |
lymphocyte | 1.16e-10 | 53 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.85e-08 | 76 |
bone element | 5.25e-07 | 82 |
hematopoietic system | 8.44e-07 | 98 |
blood island | 8.44e-07 | 98 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.62e-12 | 239 |
cancer | 6.89e-11 | 235 |
carcinoma | 5.68e-10 | 106 |
cell type cancer | 6.66e-07 | 143 |
Showing 1 to 4 of 4 entries