FFCP PHASE1:Hg19::chr5:142782823..142782854,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7978 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 07:41, 25 September 2015
Short description: | p3@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR3C1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 39bp_to_ENST00000415690_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@NR3C1 |
---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.07e-70 | 136 |
hematopoietic stem cell | 2.03e-61 | 168 |
hematopoietic lineage restricted progenitor cell | 5.80e-59 | 120 |
hematopoietic cell | 4.25e-58 | 177 |
hematopoietic oligopotent progenitor cell | 1.06e-56 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-56 | 161 |
nongranular leukocyte | 2.66e-56 | 115 |
myeloid leukocyte | 2.84e-50 | 72 |
granulocyte monocyte progenitor cell | 1.86e-44 | 67 |
myeloid lineage restricted progenitor cell | 3.18e-41 | 66 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.77e-52 | 98 |
blood island | 9.77e-52 | 98 |
hemolymphoid system | 8.67e-45 | 108 |
bone marrow | 5.93e-39 | 76 |
immune system | 6.32e-35 | 93 |
bone element | 3.92e-34 | 82 |
skeletal element | 9.09e-29 | 90 |
skeletal system | 3.59e-25 | 100 |
connective tissue | 6.37e-17 | 371 |
lateral plate mesoderm | 9.96e-17 | 203 |
Showing 1 to 10 of 14 entries