FFCP PHASE1:Mm9::chr15:80808038..80808049,+
From FANTOM5_SSTAR
Short description: | p2@Sgsm3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sgsm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -145bp_to_ENSMUST00000042506, ENSMUST00000139517, NM_134091, uc007wwa.2, uc007wwb.2_5end |
EntrezGene: | Sgsm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Sgsm3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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thymocyte | 1.98e-20 | 6 |
double negative thymocyte | 1.98e-20 | 6 |
naive T cell | 1.98e-20 | 6 |
double-positive, alpha-beta thymocyte | 1.98e-20 | 6 |
CD4-positive, alpha-beta thymocyte | 1.98e-20 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.98e-20 | 6 |
DN4 thymocyte | 1.98e-20 | 6 |
DN1 thymic pro-T cell | 1.98e-20 | 6 |
DN2 thymocyte | 1.98e-20 | 6 |
DN3 thymocyte | 1.98e-20 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.