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Coexpression cluster:C43

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Revision as of 13:03, 5 September 2012 by Autoedit (talk | contribs)
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Full id: C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder



Phase1 CAGE Peaks

Hg19::chr10:114094924..114094935,-p@chr10:114094924..114094935
-
Hg19::chr10:119301928..119301955,+p7@EMX2
Hg19::chr10:119302352..119302362,+p9@EMX2
Hg19::chr10:119799753..119799794,-p10@RAB11FIP2
Hg19::chr10:134232503..134232535,+p1@ENST00000428814
Hg19::chr10:25623518..25623540,-p@chr10:25623518..25623540
-
Hg19::chr10:62493155..62493178,-p21@ANK3
Hg19::chr10:62493181..62493193,-p32@ANK3
Hg19::chr10:98351232..98351244,+p@chr10:98351232..98351244
+
Hg19::chr11:1013099..1013106,-p@chr11:1013099..1013106
-
Hg19::chr11:1013272..1013280,-p@chr11:1013272..1013280
-
Hg19::chr11:1013442..1013453,-p@chr11:1013442..1013453
-
Hg19::chr11:1016149..1016156,-p27@MUC6
Hg19::chr11:1016166..1016191,-p14@MUC6
Hg19::chr11:1016201..1016208,-p22@MUC6
Hg19::chr11:1016211..1016226,-p17@MUC6
Hg19::chr11:1016227..1016230,-p28@MUC6
Hg19::chr11:1016244..1016253,-p18@MUC6
Hg19::chr11:1016258..1016273,-p9@MUC6
Hg19::chr11:1016279..1016282,-p31@MUC6
Hg19::chr11:1016362..1016365,-p29@MUC6
Hg19::chr11:1016401..1016406,-p26@MUC6
Hg19::chr11:1016415..1016419,-p30@MUC6
Hg19::chr11:1016420..1016427,-p21@MUC6
Hg19::chr11:1016455..1016460,-p24@MUC6
Hg19::chr11:1016476..1016483,-p23@MUC6
Hg19::chr11:1016486..1016504,-p15@MUC6
Hg19::chr11:1016543..1016550,-p25@MUC6
Hg19::chr11:1016579..1016592,-p16@MUC6
Hg19::chr11:1016624..1016641,-p13@MUC6
Hg19::chr11:1016643..1016652,+p@chr11:1016643..1016652
+
Hg19::chr11:1016670..1016714,-p7@MUC6
Hg19::chr11:1016733..1016759,-p10@MUC6
Hg19::chr11:1016808..1016846,+p@chr11:1016808..1016846
+
Hg19::chr11:1016848..1016859,-p2@MUC6
Hg19::chr11:1016867..1016885,-p3@MUC6
Hg19::chr11:1016951..1016964,+p@chr11:1016951..1016964
+
Hg19::chr11:1017057..1017071,-p4@MUC6
Hg19::chr11:1017321..1017335,+p@chr11:1017321..1017335
+
Hg19::chr11:1017376..1017391,-p5@MUC6
Hg19::chr11:1017397..1017423,+p@chr11:1017397..1017423
+
Hg19::chr11:1017438..1017449,-p11@MUC6
Hg19::chr11:1017461..1017470,+p@chr11:1017461..1017470
+
Hg19::chr11:1017627..1017639,+p@chr11:1017627..1017639
+
Hg19::chr11:1017652..1017678,+p@chr11:1017652..1017678
+
Hg19::chr11:1017702..1017752,+p@chr11:1017702..1017752
+
Hg19::chr11:1017739..1017750,-p8@MUC6
Hg19::chr11:1017752..1017774,-p6@MUC6
Hg19::chr11:1017870..1017878,+p@chr11:1017870..1017878
+
Hg19::chr11:1018011..1018015,-p@chr11:1018011..1018015
-
Hg19::chr11:1018019..1018037,-p@chr11:1018019..1018037
-
Hg19::chr11:1018048..1018062,-p@chr11:1018048..1018062
-
Hg19::chr11:1018090..1018140,-p@chr11:1018090..1018140
-
Hg19::chr11:1018142..1018149,-p@chr11:1018142..1018149
-
Hg19::chr11:1018158..1018164,+p@chr11:1018158..1018164
+
Hg19::chr11:1018159..1018178,-p@chr11:1018159..1018178
-
Hg19::chr11:1018187..1018196,-p@chr11:1018187..1018196
-
Hg19::chr11:1018232..1018304,-p@chr11:1018232..1018304
-
Hg19::chr11:1018307..1018309,-p@chr11:1018307..1018309
-
Hg19::chr11:1018310..1018327,-p@chr11:1018310..1018327
-
Hg19::chr11:1018352..1018367,-p@chr11:1018352..1018367
-
Hg19::chr11:1018378..1018399,-p@chr11:1018378..1018399
-
Hg19::chr11:1018402..1018430,-p@chr11:1018402..1018430
-
Hg19::chr11:1018438..1018445,-p@chr11:1018438..1018445
-
Hg19::chr11:1018513..1018524,-p@chr11:1018513..1018524
-
Hg19::chr11:1018525..1018543,-p@chr11:1018525..1018543
-
Hg19::chr11:1018550..1018568,-p@chr11:1018550..1018568
-
Hg19::chr11:1018616..1018623,-p@chr11:1018616..1018623
-
Hg19::chr11:1018635..1018642,-p@chr11:1018635..1018642
-
Hg19::chr11:1018647..1018658,-p@chr11:1018647..1018658
-
Hg19::chr11:1018663..1018670,-p@chr11:1018663..1018670
-
Hg19::chr11:1018680..1018698,-p@chr11:1018680..1018698
-
Hg19::chr11:1018706..1018723,-p@chr11:1018706..1018723
-
Hg19::chr11:1018730..1018745,-p@chr11:1018730..1018745
-
Hg19::chr11:1019312..1019321,-p@chr11:1019312..1019321
-
Hg19::chr11:1019328..1019339,-p@chr11:1019328..1019339
-
Hg19::chr11:1019342..1019353,-p@chr11:1019342..1019353
-
Hg19::chr11:1019367..1019394,-p@chr11:1019367..1019394
-
Hg19::chr11:1019410..1019417,-p@chr11:1019410..1019417
-
Hg19::chr11:1019421..1019426,-p@chr11:1019421..1019426
-
Hg19::chr11:1019445..1019446,-p@chr11:1019445..1019446
-
Hg19::chr11:1019451..1019454,-p@chr11:1019451..1019454
-
Hg19::chr11:1019468..1019479,-p@chr11:1019468..1019479
-
Hg19::chr11:1019492..1019501,-p@chr11:1019492..1019501
-
Hg19::chr11:1020139..1020193,-p@chr11:1020139..1020193
-
Hg19::chr11:1020196..1020210,-p@chr11:1020196..1020210
-
Hg19::chr11:1020219..1020229,-p@chr11:1020219..1020229
-
Hg19::chr11:1020249..1020261,-p@chr11:1020249..1020261
-
Hg19::chr11:1021248..1021282,-p20@MUC6
Hg19::chr11:1023568..1023613,-p@chr11:1023568..1023613
-
Hg19::chr11:1023637..1023640,-p@chr11:1023637..1023640
-
Hg19::chr11:1023642..1023651,-p@chr11:1023642..1023651
-
Hg19::chr11:1024012..1024021,-p@chr11:1024012..1024021
-
Hg19::chr11:1024035..1024042,-p@chr11:1024035..1024042
-
Hg19::chr11:1024095..1024101,-p@chr11:1024095..1024101
-
Hg19::chr11:1024883..1024900,-p@chr11:1024883..1024900
-
Hg19::chr11:1024905..1024910,-p@chr11:1024905..1024910
-
Hg19::chr11:1024945..1024956,-p@chr11:1024945..1024956
-
Hg19::chr11:1024989..1024993,-p@chr11:1024989..1024993
-
Hg19::chr11:1025034..1025037,-p@chr11:1025034..1025037
-
Hg19::chr11:1025241..1025251,-p@chr11:1025241..1025251
-
Hg19::chr11:1029535..1029544,-p@chr11:1029535..1029544
-
Hg19::chr11:1030976..1030983,-p@chr11:1030976..1030983
-
Hg19::chr11:1030990..1030995,-p@chr11:1030990..1030995
-
Hg19::chr11:1031050..1031060,-p@chr11:1031050..1031060
-
Hg19::chr11:1031724..1031734,-p@chr11:1031724..1031734
-
Hg19::chr11:1031855..1031866,-p@chr11:1031855..1031866
-
Hg19::chr11:1031932..1031939,-p@chr11:1031932..1031939
-
Hg19::chr11:1032012..1032026,-p@chr11:1032012..1032026
-
Hg19::chr11:1032745..1032750,-p@chr11:1032745..1032750
-
Hg19::chr11:1032926..1032949,-p@chr11:1032926..1032949
-
Hg19::chr11:1033062..1033073,-p@chr11:1033062..1033073
-
Hg19::chr11:1036706..1036726,-p1@MUC6
Hg19::chr11:1049689..1049702,+p1@ENST00000534584
Hg19::chr11:1049725..1049732,+p5@ENST00000534584
Hg19::chr11:1049862..1049873,+p2@ENST00000534584
Hg19::chr11:125616155..125616181,+p1@PATE1
Hg19::chr11:125616184..125616201,+p2@PATE1
Hg19::chr11:125617426..125617437,+p@chr11:125617426..125617437
+
Hg19::chr11:125617442..125617453,+p@chr11:125617442..125617453
+
Hg19::chr11:125617607..125617617,+p@chr11:125617607..125617617
+
Hg19::chr11:125617636..125617646,+p@chr11:125617636..125617646
+
Hg19::chr11:125618495..125618517,+p@chr11:125618495..125618517
+
Hg19::chr11:125618661..125618677,+p@chr11:125618661..125618677
+
Hg19::chr11:125618739..125618756,-p@chr11:125618739..125618756
-
Hg19::chr11:125703090..125703100,-p@chr11:125703090..125703100
-
Hg19::chr11:125703204..125703221,+p1@PATE4
Hg19::chr11:125706033..125706038,+p@chr11:125706033..125706038
+
Hg19::chr11:2465735..2465749,-p@chr11:2465735..2465749
-
Hg19::chr11:30182693..30182698,-p@chr11:30182693..30182698
-
Hg19::chr11:34533257..34533273,-p4@ELF5
Hg19::chr11:34535276..34535287,-p3@ELF5
Hg19::chr11:34592440..34592452,+p1@ENST00000527135
Hg19::chr11:34643148..34643157,+p16@EHF
Hg19::chr11:34645764..34645775,+p9@EHF
Hg19::chr11:34657264..34657269,+p@chr11:34657264..34657269
+
Hg19::chr11:34661390..34661395,-p@chr11:34661390..34661395
-
Hg19::chr11:34663654..34663663,+p17@EHF
Hg19::chr11:34816713..34816719,-p@chr11:34816713..34816719
-
Hg19::chr11:34841932..34841939,+p@chr11:34841932..34841939
+
Hg19::chr11:3837418..3837454,+p3@PGAP2
Hg19::chr11:60451339..60451345,-p@chr11:60451339..60451345
-
Hg19::chr11:69950851..69950887,+p@chr11:69950851..69950887
+
Hg19::chr11:69954393..69954400,-p@chr11:69954393..69954400
-
Hg19::chr11:69957757..69957785,-p@chr11:69957757..69957785
-
Hg19::chr11:69963227..69963231,+p@chr11:69963227..69963231
+
Hg19::chr11:7627035..7627047,+p18@PPFIBP2
Hg19::chr11:92922903..92922918,+p@chr11:92922903..92922918
+
Hg19::chr12:115122224..115122233,-p12@TBX3
Hg19::chr12:115122262..115122271,-p7@TBX3
Hg19::chr12:115122297..115122302,-p15@TBX3
Hg19::chr12:115122303..115122314,-p6@TBX3
Hg19::chr12:115122318..115122331,-p2@TBX3
Hg19::chr12:126515178..126515204,+p@chr12:126515178..126515204
+
Hg19::chr12:18414412..18414427,+p2@PIK3C2G
Hg19::chr12:18414446..18414457,+p1@PIK3C2G
Hg19::chr12:50344516..50344532,+p1@AQP2
Hg19::chr12:50350567..50350576,+p3@AQP2
Hg19::chr12:50350704..50350713,+p2@AQP2
Hg19::chr12:50351023..50351037,+p@chr12:50351023..50351037
+
Hg19::chr12:52426680..52426686,-p@chr12:52426680..52426686
-
Hg19::chr13:114542996..114543009,-p@chr13:114542996..114543009
-
Hg19::chr13:43629536..43629554,+p@chr13:43629536..43629554
+
Hg19::chr14:105935020..105935028,-p@chr14:105935020..105935028
-
Hg19::chr14:21467316..21467327,-p1@ENST00000557335
Hg19::chr14:21467429..21467463,+p1@SLC39A2
Hg19::chr15:45406348..45406383,-p1@DUOX2
Hg19::chr15:45406385..45406401,-p2@DUOX2
Hg19::chr15:45406522..45406525,+p1@DUOXA2
Hg19::chr15:48393693..48393723,-p@chr15:48393693..48393723
-
Hg19::chr15:58623617..58623628,-p8@ALDH1A2
Hg19::chr15:91849918..91849931,+p@chr15:91849918..91849931
+
Hg19::chr15:91849948..91849962,+p@chr15:91849948..91849962
+
Hg19::chr15:91849967..91849970,+p@chr15:91849967..91849970
+
Hg19::chr15:98561014..98561023,-p@chr15:98561014..98561023
-
Hg19::chr17:1648250..1648286,+p3@SERPINF2
Hg19::chr17:37366154..37366159,+p@chr17:37366154..37366159
+
Hg19::chr17:37381998..37382009,-p6@STAC2
Hg19::chr17:37382029..37382048,-p2@STAC2
Hg19::chr17:37382066..37382085,-p4@STAC2
Hg19::chr17:37382105..37382120,-p5@STAC2
Hg19::chr17:37382164..37382182,-p3@STAC2
Hg19::chr17:37824133..37824155,+p4@PNMT
Hg19::chr17:44928946..44928953,+p1@WNT9B
Hg19::chr17:49021974..49021982,-p1@ENST00000501718
Hg19::chr17:59474831..59474844,+p@chr17:59474831..59474844
+
Hg19::chr17:59475349..59475360,+p@chr17:59475349..59475360
+
Hg19::chr17:59475447..59475455,+p@chr17:59475447..59475455
+
Hg19::chr17:59475472..59475493,+p@chr17:59475472..59475493
+
Hg19::chr17:59475532..59475544,+p@chr17:59475532..59475544
+
Hg19::chr17:59475590..59475608,+p@chr17:59475590..59475608
+
Hg19::chr18:30353911..30353913,+p@chr18:30353911..30353913
+
Hg19::chr18:9475687..9475698,+p6@RALBP1
Hg19::chr19:15703376..15703385,-p@chr19:15703376..15703385
-
Hg19::chr19:15706318..15706336,+p@chr19:15706318..15706336
+
Hg19::chr19:15726022..15726074,+p1@CYP4F8
Hg19::chr19:15728825..15728834,+p@chr19:15728825..15728834
+
Hg19::chr19:15728853..15728859,+p@chr19:15728853..15728859
+
Hg19::chr19:15728879..15728890,+p@chr19:15728879..15728890
+
Hg19::chr19:15728999..15729014,+p@chr19:15728999..15729014
+
Hg19::chr19:15729741..15729749,+p@chr19:15729741..15729749
+
Hg19::chr19:15729846..15729851,+p@chr19:15729846..15729851
+
Hg19::chr19:15729943..15729948,+p@chr19:15729943..15729948
+
Hg19::chr19:15730000..15730004,+p@chr19:15730000..15730004
+
Hg19::chr19:15730135..15730149,+p@chr19:15730135..15730149
+
Hg19::chr19:15730666..15730675,+p@chr19:15730666..15730675
+
Hg19::chr19:15731181..15731184,+p@chr19:15731181..15731184
+
Hg19::chr19:15731989..15732000,+p@chr19:15731989..15732000
+
Hg19::chr19:15732081..15732088,+p@chr19:15732081..15732088
+
Hg19::chr19:15733036..15733039,+p@chr19:15733036..15733039
+
Hg19::chr19:15733072..15733082,+p@chr19:15733072..15733082
+
Hg19::chr19:15733200..15733213,+p@chr19:15733200..15733213
+
Hg19::chr19:15733422..15733428,+p@chr19:15733422..15733428
+
Hg19::chr19:15734133..15734157,+p@chr19:15734133..15734157
+
Hg19::chr19:15736305..15736328,+p@chr19:15736305..15736328
+
Hg19::chr19:15739153..15739175,+p@chr19:15739153..15739175
+
Hg19::chr19:20265757..20265766,+p@chr19:20265757..20265766
+
Hg19::chr19:38743779..38743782,-p@chr19:38743779..38743782
-
Hg19::chr19:9820333..9820338,+p@chr19:9820333..9820338
+
Hg19::chr1:151926100..151926113,-p@chr1:151926100..151926113
-
Hg19::chr1:16553419..16553431,-p@chr1:16553419..16553431
-
Hg19::chr1:20113572..20113583,-p11@TMCO4
Hg19::chr1:25179461..25179463,+p@chr1:25179461..25179463
+
Hg19::chr1:26217127..26217131,+p@chr1:26217127..26217131
+
Hg19::chr1:30482788..30482792,-p@chr1:30482788..30482792
-
Hg19::chr20:40980960..40980970,-p@chr20:40980960..40980970
-
Hg19::chr20:43767209..43767214,-p@chr20:43767209..43767214
-
Hg19::chr20:43835380..43835384,+p2@SEMG1
p3@SEMG2
Hg19::chr20:43835666..43835686,+p1@SEMG1
p1@SEMG2
Hg19::chr20:43836014..43836047,+p@chr20:43836014..43836047
+
Hg19::chr20:43836059..43836079,+p@chr20:43836059..43836079
+
Hg19::chr20:43836066..43836075,-p@chr20:43836066..43836075
-
Hg19::chr20:43836085..43836090,+p@chr20:43836085..43836090
+
Hg19::chr20:43836095..43836104,+p@chr20:43836095..43836104
+
Hg19::chr20:43836095..43836111,-p@chr20:43836095..43836111
-
Hg19::chr20:43836115..43836122,-p@chr20:43836115..43836122
-
Hg19::chr20:43836116..43836139,+p@chr20:43836116..43836139
+
Hg19::chr20:43836142..43836161,+p@chr20:43836142..43836161
+
Hg19::chr20:43836162..43836169,-p@chr20:43836162..43836169
-
Hg19::chr20:43836170..43836181,-p@chr20:43836170..43836181
-
Hg19::chr20:43836195..43836224,+p@chr20:43836195..43836224
+
Hg19::chr20:43836225..43836234,-p@chr20:43836225..43836234
-
Hg19::chr20:43836228..43836253,+p@chr20:43836228..43836253
+
Hg19::chr20:43836241..43836261,-p@chr20:43836241..43836261
-
Hg19::chr20:43836267..43836284,-p@chr20:43836267..43836284
-
Hg19::chr20:43836287..43836295,-p@chr20:43836287..43836295
-
Hg19::chr20:43836299..43836327,+p@chr20:43836299..43836327
+
Hg19::chr20:43836329..43836334,-p@chr20:43836329..43836334
-
Hg19::chr20:43836329..43836338,+p@chr20:43836329..43836338
+
Hg19::chr20:43836377..43836385,+p@chr20:43836377..43836385
+
Hg19::chr20:43836388..43836423,+p@chr20:43836388..43836423
+
Hg19::chr20:43836430..43836465,+p@chr20:43836430..43836465
+
Hg19::chr20:43836486..43836506,-p@chr20:43836486..43836506
-
Hg19::chr20:43836487..43836505,+p@chr20:43836487..43836505
+
Hg19::chr20:43836509..43836538,+p@chr20:43836509..43836538
+
Hg19::chr20:43836518..43836524,-p@chr20:43836518..43836524
-
Hg19::chr20:43836544..43836571,-p@chr20:43836544..43836571
-
Hg19::chr20:43836608..43836653,+p@chr20:43836608..43836653
+
Hg19::chr20:43836620..43836625,-p@chr20:43836620..43836625
-
Hg19::chr20:43836655..43836675,+p@chr20:43836655..43836675
+
Hg19::chr20:43836666..43836681,-p@chr20:43836666..43836681
-
Hg19::chr20:43836696..43836705,-p@chr20:43836696..43836705
-
Hg19::chr20:43836736..43836753,+p@chr20:43836736..43836753
+
Hg19::chr20:43836755..43836769,+p@chr20:43836755..43836769
+
Hg19::chr20:43836771..43836789,-p@chr20:43836771..43836789
-
Hg19::chr20:43836852..43836937,+p@chr20:43836852..43836937
+
Hg19::chr20:43836912..43836919,-p@chr20:43836912..43836919
-
Hg19::chr20:43836939..43836958,+p@chr20:43836939..43836958
+
Hg19::chr20:43836942..43836962,-p@chr20:43836942..43836962
-
Hg19::chr20:43837033..43837101,+p@chr20:43837033..43837101
+
Hg19::chr20:43837102..43837114,+p@chr20:43837102..43837114
+
Hg19::chr20:43837135..43837167,+p@chr20:43837135..43837167
+
Hg19::chr20:43837196..43837202,+p@chr20:43837196..43837202
+
Hg19::chr20:43837223..43837282,+p@chr20:43837223..43837282
+
Hg19::chr20:43837256..43837271,-p1@CU691119
Hg19::chr20:43837283..43837290,+p@chr20:43837283..43837290
+
Hg19::chr20:43837295..43837300,+p@chr20:43837295..43837300
+
Hg19::chr20:43837304..43837314,+p@chr20:43837304..43837314
+
Hg19::chr20:43837317..43837329,+p@chr20:43837317..43837329
+
Hg19::chr20:43838233..43838282,+p@chr20:43838233..43838282
+
Hg19::chr20:43838283..43838286,+p@chr20:43838283..43838286
+
Hg19::chr20:43838296..43838299,+p@chr20:43838296..43838299
+
Hg19::chr20:43838313..43838327,+p@chr20:43838313..43838327
+
Hg19::chr20:43838343..43838355,+p@chr20:43838343..43838355
+
Hg19::chr20:43850003..43850017,+p2@SEMG2
Hg19::chr20:43850348..43850365,+p@chr20:43850348..43850365
+
Hg19::chr20:43850370..43850384,+p@chr20:43850370..43850384
+
Hg19::chr20:43850403..43850416,+p@chr20:43850403..43850416
+
Hg19::chr20:43850418..43850438,+p@chr20:43850418..43850438
+
Hg19::chr20:43850436..43850444,-p@chr20:43850436..43850444
-
Hg19::chr20:43850450..43850493,+p@chr20:43850450..43850493
+
Hg19::chr20:43850505..43850516,-p@chr20:43850505..43850516
-
Hg19::chr20:43850531..43850538,+p@chr20:43850531..43850538
+
Hg19::chr20:43850545..43850564,+p@chr20:43850545..43850564
+
Hg19::chr20:43850565..43850590,+p@chr20:43850565..43850590
+
Hg19::chr20:43850628..43850633,+p@chr20:43850628..43850633
+
Hg19::chr20:43850640..43850649,+p@chr20:43850640..43850649
+
Hg19::chr20:43850651..43850662,+p@chr20:43850651..43850662
+
Hg19::chr20:43850664..43850675,+p@chr20:43850664..43850675
+
Hg19::chr20:43850711..43850740,+p@chr20:43850711..43850740
+
Hg19::chr20:43850750..43850755,+p@chr20:43850750..43850755
+
Hg19::chr20:43850764..43850812,+p@chr20:43850764..43850812
+
Hg19::chr20:43850822..43850832,+p@chr20:43850822..43850832
+
Hg19::chr20:43850844..43850864,+p@chr20:43850844..43850864
+
Hg19::chr20:43850865..43850873,+p@chr20:43850865..43850873
+
Hg19::chr20:43850927..43850931,+p@chr20:43850927..43850931
+
Hg19::chr20:43850941..43850991,+p@chr20:43850941..43850991
+
Hg19::chr20:43850995..43851023,+p@chr20:43850995..43851023
+
Hg19::chr20:43851080..43851084,+p@chr20:43851080..43851084
+
Hg19::chr20:43851095..43851098,+p@chr20:43851095..43851098
+
Hg19::chr20:43851110..43851138,+p@chr20:43851110..43851138
+
Hg19::chr20:43851142..43851164,+p@chr20:43851142..43851164
+
Hg19::chr20:43851172..43851181,+p@chr20:43851172..43851181
+
Hg19::chr20:43851184..43851194,+p@chr20:43851184..43851194
+
Hg19::chr20:43851312..43851315,+p@chr20:43851312..43851315
+
Hg19::chr20:43851326..43851348,+p@chr20:43851326..43851348
+
Hg19::chr20:43851353..43851363,+p@chr20:43851353..43851363
+
Hg19::chr20:43851377..43851400,+p@chr20:43851377..43851400
+
Hg19::chr20:43851422..43851430,+p@chr20:43851422..43851430
+
Hg19::chr20:43851436..43851450,+p@chr20:43851436..43851450
+
Hg19::chr20:43851454..43851459,+p@chr20:43851454..43851459
+
Hg19::chr20:43851492..43851518,+p@chr20:43851492..43851518
+
Hg19::chr20:43851532..43851542,+p@chr20:43851532..43851542
+
Hg19::chr20:43851568..43851570,+p@chr20:43851568..43851570
+
Hg19::chr20:43851679..43851707,+p@chr20:43851679..43851707
+
Hg19::chr20:43851712..43851727,+p@chr20:43851712..43851727
+
Hg19::chr20:43851737..43851742,+p@chr20:43851737..43851742
+
Hg19::chr20:43851747..43851752,+p@chr20:43851747..43851752
+
Hg19::chr20:43851758..43851791,+p@chr20:43851758..43851791
+
Hg19::chr20:43851831..43851874,+p@chr20:43851831..43851874
+
Hg19::chr20:43851878..43851883,+p@chr20:43851878..43851883
+
Hg19::chr20:43851914..43851932,+p@chr20:43851914..43851932
+
Hg19::chr20:43851935..43851976,+p@chr20:43851935..43851976
+
Hg19::chr20:43851992..43851993,+p@chr20:43851992..43851993
+
Hg19::chr20:43851994..43852003,+p@chr20:43851994..43852003
+
Hg19::chr20:43852004..43852005,+p@chr20:43852004..43852005
+
Hg19::chr20:43852924..43852944,+p@chr20:43852924..43852944
+
Hg19::chr20:43852949..43852953,+p@chr20:43852949..43852953
+
Hg19::chr20:43852958..43852972,+p@chr20:43852958..43852972
+
Hg19::chr20:43853005..43853012,+p@chr20:43853005..43853012
+
Hg19::chr20:43853036..43853043,+p@chr20:43853036..43853043
+
Hg19::chr20:43853046..43853053,+p@chr20:43853046..43853053
+
Hg19::chr20:43881726..43881759,-p@chr20:43881726..43881759
-
Hg19::chr20:43881765..43881790,-p@chr20:43881765..43881790
-
Hg19::chr20:43882241..43882287,-p@chr20:43882241..43882287
-
Hg19::chr20:43882308..43882340,-p@chr20:43882308..43882340
-
Hg19::chr20:43882345..43882381,-p@chr20:43882345..43882381
-
Hg19::chr21:44936834..44936852,-p@chr21:44936834..44936852
-
Hg19::chr22:24990746..24990764,+p5@GGT1
p5@GGT2
Hg19::chr22:29702746..29702758,+p7@GAS2L1
Hg19::chr22:31739411..31739446,-p5@PATZ1
Hg19::chr22:42896601..42896617,+p1@SERHL
Hg19::chr2:173092815..173092822,+p@chr2:173092815..173092822
+
Hg19::chr2:177036652..177036662,+p@chr2:177036652..177036662
+
Hg19::chr2:18887940..18887947,+p@chr2:18887940..18887947
+
Hg19::chr2:219942197..219942226,+p@chr2:219942197..219942226
+
Hg19::chr2:223648293..223648295,+p@chr2:223648293..223648295
+
Hg19::chr2:224621254..224621326,-p@chr2:224621254..224621326
-
Hg19::chr2:74143722..74143740,+p@chr2:74143722..74143740
+
Hg19::chr2:87985242..87985251,-p@chr2:87985242..87985251
-
Hg19::chr2:96812775..96812786,-p1@ENST00000449242
Hg19::chr3:133663994..133664017,-p@chr3:133663994..133664017
-
Hg19::chr3:133748913..133748927,-p2@SLCO2A1
Hg19::chr3:133748943..133748955,-p3@SLCO2A1
Hg19::chr3:155455667..155455700,-p@chr3:155455667..155455700
-
Hg19::chr3:193555228..193555250,-p@chr3:193555228..193555250
-
Hg19::chr3:193555252..193555265,-p@chr3:193555252..193555265
-
Hg19::chr3:46480817..46480825,-p@chr3:46480817..46480825
-
Hg19::chr3:46482934..46482982,-p@chr3:46482934..46482982
-
Hg19::chr3:46501265..46501314,-p@chr3:46501265..46501314
-
Hg19::chr4:10008097..10008109,+p1@ENST00000503493
Hg19::chr4:25656780..25656793,+p2@SLC34A2
Hg19::chr4:25656920..25656927,+p8@SLC34A2
Hg19::chr4:42942084..42942100,+p@chr4:42942084..42942100
+
Hg19::chr4:89079817..89079832,-p7@ABCG2
Hg19::chr4:9446156..9446170,+p2@DEFB131
Hg19::chr4:96012601..96012612,+p17@BMPR1B
Hg19::chr4:96012614..96012632,+p14@BMPR1B
Hg19::chr5:131335139..131335149,-p10@ACSL6
Hg19::chr5:131339117..131339121,-p@chr5:131339117..131339121
-
Hg19::chr5:134260998..134261018,-p@chr5:134260998..134261018
-
Hg19::chr5:148960931..148961073,+p1@ARHGEF37
Hg19::chr5:179511281..179511283,+p@chr5:179511281..179511283
+
Hg19::chr6:107230334..107230374,-p@chr6:107230334..107230374
-
Hg19::chr6:70856430..70856440,+p@chr6:70856430..70856440
+
Hg19::chr7:107435037..107435050,-p2@SLC26A3
Hg19::chr7:128550736..128550768,-p1@KCP
Hg19::chr7:128581316..128581333,+p@chr7:128581316..128581333
+
Hg19::chr7:142832277..142832283,+p@chr7:142832277..142832283
+
Hg19::chr7:142832310..142832315,+p@chr7:142832310..142832315
+
Hg19::chr7:142832323..142832332,+p@chr7:142832323..142832332
+
Hg19::chr7:142832334..142832348,+p@chr7:142832334..142832348
+
Hg19::chr7:142836165..142836175,+p@chr7:142836165..142836175
+
Hg19::chr7:142836184..142836203,+p@chr7:142836184..142836203
+
Hg19::chr7:142836205..142836214,+p@chr7:142836205..142836214
+
Hg19::chr7:142836217..142836230,+p@chr7:142836217..142836230
+
Hg19::chr7:142836239..142836244,+p@chr7:142836239..142836244
+
Hg19::chr7:25702558..25702582,-p2@ENST00000423689
Hg19::chr7:25702584..25702625,-p1@ENST00000423689
Hg19::chr7:25702639..25702664,-p1@ENST00000446840
p1@uc003sxp.1
Hg19::chr7:25702669..25702678,-p4@ENST00000446840
p4@uc003sxp.1
Hg19::chr7:75544218..75544238,-p@chr7:75544218..75544238
-
Hg19::chr7:95224857..95224870,-p@chr7:95224857..95224870
-
Hg19::chr8:124749672..124749682,-p2@ANXA13
Hg19::chr8:22844948..22844964,+p17@RHOBTB2
Hg19::chr8:22844997..22845008,+p12@RHOBTB2
Hg19::chr8:22845010..22845020,+p18@RHOBTB2
Hg19::chr8:27947746..27947750,+p3@ELP3
Hg19::chr9:132258076..132258088,+p@chr9:132258076..132258088
+
Hg19::chr9:138479791..138479804,+p1@ENST00000434190
Hg19::chr9:138555154..138555159,+p1@LCN9
Hg19::chr9:4066471..4066476,+p@chr9:4066471..4066476
+
Hg19::chrX:106171274..106171287,+p3@CLDN2
Hg19::chrX:11284012..11284023,-p16@ARHGAP6
Hg19::chrX:118285087..118285098,-p@chrX:118285087..118285098
-
Hg19::chrX:152622610..152622615,+p@chrX:152622610..152622615
+
Hg19::chrX:4693334..4693349,-p@chrX:4693334..4693349
-
Hg19::chrX:56644819..56644825,+p1@ENST00000446028
Hg19::chrX:93855299..93855313,-p@chrX:93855299..93855313
-
Hg19::chrX:93855318..93855329,-p@chrX:93855318..93855329
-
Hg19::chrX:95646748..95646761,-p@chrX:95646748..95646761
-
Hg19::chrX:95646780..95646789,-p@chrX:95646780..95646789
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

p.valueFDRnGenesnPathwayName
2.53205911108454e-050.01602793417316516401Transmembrane transport of small molecules (Reactome):REACT_15518



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0016324apical plasma membrane0.0227850847922863
GO:0005624membrane fraction0.0227850847922863
GO:0045177apical part of cell0.0227850847922863
GO:0003002regionalization0.0227850847922863
GO:0005100Rho GTPase activator activity0.038153331909274
GO:0007389pattern specification process0.038153331909274
GO:0046660female sex differentiation0.038153331909274
GO:0046545development of primary female sexual characteristics0.038153331909274
GO:0000267cell fraction0.038153331909274
GO:0048736appendage development0.038153331909274
GO:0060173limb development0.038153331909274
GO:0035107appendage morphogenesis0.038153331909274
GO:0035108limb morphogenesis0.038153331909274
GO:0030141secretory granule0.038153331909274
GO:0007588excretion0.0398367282860395
GO:0005550pheromone binding0.0398367282860395
GO:0032275luteinizing hormone secretion0.0398367282860395
GO:0004603phenylethanolamine N-methyltransferase activity0.0398367282860395
GO:0009952anterior/posterior pattern formation0.0465077853848852
GO:0051234establishment of localization0.0465077853848852
GO:0045137development of primary sexual characteristics0.0465077853848852
GO:0001550ovarian cumulus expansion0.0465077853848852
GO:0022605oogenesis stage0.0465077853848852
GO:0017160Ral GTPase binding0.0465077853848852
GO:0001547antral ovarian follicle growth0.0465077853848852
GO:0048165fused antrum stage, oogenesis0.0465077853848852
GO:0008393fatty acid (omega-1)-hydroxylase activity0.0465077853848852
GO:0030540female genitalia development0.0465077853848852
GO:0009651response to salt stress0.0465077853848852
GO:0048609reproductive process in a multicellular organism0.0465077853848852
GO:0032504multicellular organism reproduction0.0465077853848852
GO:0015103inorganic anion transmembrane transporter activity0.047749213512135
GO:0043089positive regulation of Cdc42 GTPase activity0.047749213512135
GO:0030277maintenance of gastrointestinal epithelium0.047749213512135
GO:0042335cuticle development0.047749213512135
GO:0045662negative regulation of myoblast differentiation0.047749213512135
GO:0035117embryonic arm morphogenesis0.047749213512135
GO:0016565general transcriptional repressor activity0.047749213512135
GO:0035140arm morphogenesis0.047749213512135
GO:0001758retinal dehydrogenase activity0.047749213512135
GO:0042910xenobiotic transporter activity0.047749213512135
GO:0016174NAD(P)H oxidase activity0.047749213512135
GO:0008559xenobiotic-transporting ATPase activity0.047749213512135
GO:0035005phosphatidylinositol-4-phosphate 3-kinase activity0.047749213512135
GO:0005549odorant binding0.047749213512135
GO:0051179localization0.0478004503973717
GO:0005886plasma membrane0.0478004503973717



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br>disease_data<br>

Uber Anatomy
Ontology termp-valuen
adult organism8.29e-43115
neural tube3.68e-2057
neural rod3.68e-2057
future spinal cord3.68e-2057
neural keel3.68e-2057
central nervous system1.24e-1882
regional part of brain1.31e-1659
neurectoderm1.39e-1690
neural plate2.52e-1686
presumptive neural plate2.52e-1686
regional part of nervous system3.79e-1694
nervous system3.79e-1694
anterior neural tube5.58e-1642
organ1.25e-15511
anterior region of body1.29e-15129
craniocervical region1.29e-15129
brain1.86e-1569
future brain1.86e-1569
ectoderm1.89e-15173
presumptive ectoderm1.89e-15173
regional part of forebrain2.03e-1541
forebrain2.03e-1541
future forebrain2.03e-1541
ectoderm-derived structure4.51e-15169
multi-tissue structure5.83e-15347
head5.98e-15123
endoderm-derived structure2.47e-14169
endoderm2.47e-14169
presumptive endoderm2.47e-14169
digestive system7.20e-13155
digestive tract7.20e-13155
primitive gut7.20e-13155
telencephalon9.00e-1334
gray matter1.11e-1234
brain grey matter1.11e-1234
regional part of telencephalon2.36e-1233
organ part4.27e-12219
cerebral hemisphere6.84e-1232
pre-chordal neural plate7.98e-1261
subdivision of digestive tract8.82e-12129
endodermal part of digestive tract8.82e-12129
multi-cellular organism1.61e-11659
mixed endoderm/mesoderm-derived structure2.98e-11130
embryo5.74e-11612
anatomical cluster7.90e-11286
regional part of cerebral cortex3.20e-1022
anatomical system1.30e-09625
embryonic structure1.51e-09605
developing anatomical structure1.51e-09605
anatomical group1.98e-09626
neocortex2.27e-0920
cerebral cortex2.56e-0925
pallium2.56e-0925
germ layer3.22e-09604
embryonic tissue3.22e-09604
presumptive structure3.22e-09604
epiblast (generic)3.22e-09604
anatomical conduit1.10e-08241
organism subdivision3.07e-08365
foregut9.78e-0898
Disease
Ontology termp-valuen
cell type cancer8.97e-09143
carcinoma1.69e-08106


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
GATA3#2625271.742620714797540.00421330977666130.020056237910881



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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