FFCP PHASE1:Hg19::chr11:16629630..16629643,-
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Short description: | p20@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -356bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p20@SOX6 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.73e-37 | 2 |
cranial nerve II | 3.25e-19 | 1 |
cranial nerve | 3.25e-19 | 1 |
nerve trunk | 3.25e-19 | 1 |
nerve connecting eye with brain | 3.25e-19 | 1 |
nerve | 3.25e-19 | 1 |
retinal neural layer | 3.25e-19 | 1 |
presumptive neural retina | 3.25e-19 | 1 |
multi cell component structure | 2.72e-10 | 2 |
neuron projection bundle | 2.72e-10 | 2 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.71e-45 | 10 |
germ cell and embryonal cancer | 9.76e-21 | 22 |
germ cell cancer | 9.76e-21 | 22 |
peripheral nerve sheath neoplasm | 1.57e-10 | 2 |
neurofibroma | 1.57e-10 | 2 |
peripheral nervous system neoplasm | 1.93e-07 | 3 |
Showing 1 to 6 of 6 entries