FFCP PHASE1:Hg19::chr15:32976539..32976558,+
From FANTOM5_SSTAR
Jump to: navigation, search
Short description: | p5@SCG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCG5_5end |
Coexpression cluster: | C2329_cholangiocellular_gall_pagetoid_mesenchymal_bone_Macrophage_Aortic |
Association with transcript: | -58bp_to_ENST00000498607_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SCG5 |
---|
0
5
10
15
20
25
30
35
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.13e-15 | 10 |
gingival epithelial cell | 1.52e-13 | 3 |
epithelial cell of Malassez | 1.74e-13 | 3 |
bone matrix secreting cell | 5.19e-10 | 2 |
osteocyte | 5.19e-10 | 2 |
osteoclast | 5.19e-10 | 2 |
vascular associated smooth muscle cell | 1.32e-07 | 32 |
general ecto-epithelial cell | 2.02e-07 | 14 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.13e-15 | 10 |
arterial system smooth muscle | 1.13e-15 | 10 |
artery smooth muscle tissue | 1.13e-15 | 10 |
aorta smooth muscle tissue | 1.13e-15 | 10 |
gingival epithelium | 1.52e-13 | 3 |
jaw skeleton | 3.10e-10 | 4 |
splanchnocranium | 3.10e-10 | 4 |
smooth muscle tissue | 3.15e-10 | 15 |
aorta | 1.46e-09 | 21 |
aortic system | 1.46e-09 | 21 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 8.10e-12 | 6 |
musculoskeletal system cancer | 8.10e-12 | 6 |
giant cell tumor | 5.19e-10 | 2 |
bone giant cell tumor | 5.19e-10 | 2 |
Showing 1 to 4 of 4 entries