FFCP PHASE2:Hg19::chr13:53422767..53422780,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@PCDH8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PCDH8_5end |
| Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
| Association with transcript: | 0bp_to_ENST00000377942, ENST00000418407, ENST00000448969, NM_002590, NM_032949, uc001vhi.2, uc001vhj.2_5end |
| EntrezGene: | PCDH8 |
| HGNC: | 8660 |
| UniProt: | O95206B4DEQ8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@PCDH8 |
|---|
0
20
40
60
80
100
120
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 6.91e-16 | 8 |
| neural cell | 4.77e-13 | 25 |
| neuron | 6.57e-12 | 6 |
| neuroblast | 6.57e-12 | 6 |
| electrically signaling cell | 6.57e-12 | 6 |
| neurectodermal cell | 4.87e-11 | 59 |
| embryonic stem cell | 7.67e-10 | 5 |
| ectodermal cell | 4.50e-08 | 72 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 3.25e-82 | 89 |
| central nervous system | 3.78e-78 | 81 |
| neural tube | 8.31e-68 | 56 |
| neural rod | 8.31e-68 | 56 |
| future spinal cord | 8.31e-68 | 56 |
| neural keel | 8.31e-68 | 56 |
| regional part of forebrain | 1.56e-66 | 41 |
| forebrain | 1.56e-66 | 41 |
| anterior neural tube | 1.56e-66 | 41 |
| future forebrain | 1.56e-66 | 41 |
Showing 1 to 10 of 59 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 4.68e-12 | 10 |
| germ cell and embryonal cancer | 3.63e-10 | 22 |
| germ cell cancer | 3.63e-10 | 22 |
| neuroendocrine tumor | 3.39e-08 | 6 |
Showing 1 to 4 of 4 entries
