FFCP PHASE2:Hg19::chr18:21269404..21269427,+
From FANTOM5_SSTAR
Jump to: navigation, search
Short description: | p3@LAMA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMA3_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | -134bp_to_ENST00000313654, ENST00000399516, ENST00000416669, ENST00000538801, NM_001127717, NM_198129, uc002kuq.2, uc002kur.2, uc010dlv.1_5end |
EntrezGene: | LAMA3 |
HGNC: | 6483 |
UniProt: | Q16787Q6VU67F5GWM0F5H8G3Q566Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@LAMA3 |
---|
0
20
40
60
80
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.50e-13 | 253 |
squamous epithelial cell | 2.88e-07 | 63 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
intermediate mesoderm | 2.72e-12 | 28 |
renal system | 7.13e-11 | 48 |
urinary system structure | 1.56e-10 | 47 |
genitourinary system | 1.58e-09 | 15 |
digestive system | 2.05e-09 | 145 |
digestive tract | 2.05e-09 | 145 |
primitive gut | 2.05e-09 | 145 |
reproductive structure | 2.57e-09 | 59 |
reproductive system | 2.57e-09 | 59 |
endoderm-derived structure | 2.82e-09 | 160 |
Showing 1 to 10 of 41 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.47e-11 | 106 |
cell type cancer | 7.00e-09 | 143 |
squamous cell carcinoma | 5.58e-07 | 14 |
Showing 1 to 3 of 3 entries