FFCP PHASE2:Hg19::chr22:24129138..24129201,+
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Short description: | p1@SMARCB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263121, ENST00000344921, ENST00000407082, ENST00000407422, ENST00000417137, NM_001007468, NM_003073, uc002zya.2, uc002zyb.2, uc002zyc.2, uc002zyd.2, uc002zyg.2, uc011ajb.1_5end |
EntrezGene: | SMARCB1 |
HGNC: | 11103 |
UniProt: | Q12824G5E975B5MCL5C9JTA6Q17S11Q9H836Q86WI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SMARCB1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 1.12e-10 | 250 |
epithelial cell of nephron | 5.61e-09 | 15 |
epithelial cell | 1.60e-08 | 253 |
ectodermal cell | 3.12e-08 | 72 |
neurectodermal cell | 5.98e-08 | 59 |
endothelial cell | 1.42e-07 | 36 |
kidney cortical cell | 1.64e-07 | 12 |
renal cortical epithelial cell | 1.64e-07 | 12 |
kidney cell | 9.66e-07 | 17 |
kidney epithelial cell | 9.66e-07 | 17 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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cell layer | 7.83e-12 | 309 |
epithelium | 3.35e-11 | 306 |
nephron epithelium | 5.61e-09 | 15 |
renal tubule | 5.61e-09 | 15 |
nephron tubule | 5.61e-09 | 15 |
nephron | 5.61e-09 | 15 |
uriniferous tubule | 5.61e-09 | 15 |
nephrogenic mesenchyme | 5.61e-09 | 15 |
ectodermal placode | 1.03e-08 | 31 |
ectoderm-derived structure | 1.19e-08 | 171 |
Showing 1 to 10 of 29 entries