FFCP PHASE2:Hg19::chr8:100025476..100025548,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@VPS13B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_VPS13B_5end |
| Coexpression cluster: | C2651_granulocyte_CD4_CD8_Small_CD19_CD34_Natural |
| Association with transcript: | 0bp_to_ENST00000355155, ENST00000357162, ENST00000358544, ENST00000395996, ENST00000441350, ENST00000496144, NM_015243, NM_017890, NM_152564, NM_181661, uc003yis.2, uc003yit.2, uc003yiu.1, uc003yiv.2, uc003yiw.2_5end |
| EntrezGene: | VPS13B |
| HGNC: | 2183 |
| UniProt: | Q7Z7G8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@VPS13B |
|---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 4.23e-20 | 168 |
| leukocyte | 4.84e-19 | 136 |
| hematopoietic oligopotent progenitor cell | 3.32e-18 | 161 |
| hematopoietic multipotent progenitor cell | 3.32e-18 | 161 |
| hematopoietic cell | 6.78e-17 | 177 |
| hematopoietic lineage restricted progenitor cell | 2.09e-14 | 120 |
| nongranular leukocyte | 3.42e-13 | 115 |
| lymphocyte | 2.27e-11 | 53 |
| common lymphoid progenitor | 2.27e-11 | 53 |
| lymphoid lineage restricted progenitor cell | 2.84e-11 | 52 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.98e-24 | 114 |
| neural tube | 7.05e-14 | 56 |
| neural rod | 7.05e-14 | 56 |
| future spinal cord | 7.05e-14 | 56 |
| neural keel | 7.05e-14 | 56 |
| regional part of nervous system | 1.22e-12 | 53 |
| regional part of brain | 1.22e-12 | 53 |
| regional part of forebrain | 8.00e-12 | 41 |
| forebrain | 8.00e-12 | 41 |
| anterior neural tube | 8.00e-12 | 41 |
Showing 1 to 10 of 23 entries
