FFCP PHASE2:Hg19::chr9:126777702..126777716,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p5@LHX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_LHX2_5end |
| Coexpression cluster: | C4632_Neurons_parietal_medial_Neural_occipital_Astrocyte_duodenum |
| Association with transcript: | 26bp_to_ENST00000488674_5end |
| EntrezGene: | LHX2 |
| HGNC: | 6594 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@LHX2 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| astrocyte of the cerebral cortex | 1.11e-35 | 3 |
| neuronal stem cell | 5.24e-24 | 8 |
| neural cell | 8.19e-21 | 25 |
| neuron | 2.20e-18 | 6 |
| neuroblast | 2.20e-18 | 6 |
| electrically signaling cell | 2.20e-18 | 6 |
| oligodendrocyte | 1.07e-15 | 7 |
| macroglial cell | 1.07e-15 | 7 |
| astrocyte | 1.07e-15 | 7 |
| oligodendrocyte precursor cell | 1.07e-15 | 7 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| cerebral cortex | 1.00e-43 | 25 |
| pallium | 1.00e-43 | 25 |
| regional part of telencephalon | 3.19e-34 | 32 |
| cerebral hemisphere | 3.19e-34 | 32 |
| brain grey matter | 3.33e-32 | 34 |
| gray matter | 3.33e-32 | 34 |
| telencephalon | 3.33e-32 | 34 |
| temporal lobe | 2.54e-27 | 6 |
| neocortex | 8.75e-27 | 20 |
| regional part of forebrain | 1.20e-26 | 41 |
Showing 1 to 10 of 39 entries
