FFCP PHASE2:Mm9::chr10:127896295..127896304,+
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Short description: | p6@Smarcc2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Smarcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 3bp_to_ENSMUST00000026433, ENSMUST00000099131, ENSMUST00000105235, NM_001114096, NM_001114097, NM_198160, uc007hmw.2, uc007hmx.2, uc007hmy.2_5end |
EntrezGene: | Smarcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@Smarcc2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 7.51e-53 | 23 |
neuroblast (sensu Vertebrata) | 7.51e-53 | 23 |
neuron | 9.20e-36 | 33 |
neuronal stem cell | 9.20e-36 | 33 |
neuroblast | 9.20e-36 | 33 |
electrically signaling cell | 9.20e-36 | 33 |
electrically responsive cell | 1.04e-29 | 39 |
electrically active cell | 1.04e-29 | 39 |
neural cell | 1.35e-29 | 43 |
ectodermal cell | 7.73e-29 | 44 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
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gray matter | 9.96e-21 | 34 |
central nervous system | 1.13e-19 | 73 |
nervous system | 4.84e-19 | 75 |
regional part of nervous system | 6.38e-16 | 54 |
brain grey matter | 7.75e-16 | 29 |
regional part of telencephalon | 7.75e-16 | 29 |
telencephalon | 7.75e-16 | 29 |
basal ganglion | 1.03e-15 | 8 |
nuclear complex of neuraxis | 1.03e-15 | 8 |
aggregate regional part of brain | 1.03e-15 | 8 |
Showing 1 to 10 of 39 entries