CL:0002202: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002202
|name=epithelial cell of tracheobronchial tree
|namespace=cell
|def="An epithelial cell of the tracheobronchial tree." [GOC:tfm]
|xref=FMA:66816
|is_...") |
No edit summary |
||
Line 20: | Line 20: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0007196 | |part_of=UBERON:0007196 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:40, 15 June 2012
Name: | epithelial cell of tracheobronchial tree | |
---|---|---|
Namespace: | cell | |
Definition: | "An epithelial cell of the tracheobronchial tree." [GOC:tfm] | |
Xrefs: |
| |
Alt_id: | CL:1000407 | |
Created by: | tmeehan | |
Creation date: | 2010-09-02T02:09:14Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002632(epithelial cell of lower respiratory tract) |
---|---|
part_of: | UBERON:0007196(tracheobronchial tree) |
Children
is a: | CL:0000307 (tracheal epithelial cell),CL:0002328 (bronchial epithelial cell) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11292-117A5 (Tracheal Epithelial Cells, donor1)
- 11369-118A1 (Tracheal Epithelial Cells, donor2)
- 11441-118I1 (Tracheal Epithelial Cells, donor3)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
- 11457-119A8 (Bronchial Epithelial Cell, donor5)
- 11461-119B3 (Bronchial Epithelial Cell, donor6)
- 11510-119G7 (Alveolar Epithelial Cells, donor1)
... further results Mouse (Mus musculus)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11292-117A5 (Tracheal Epithelial Cells, donor1)
- 11369-118A1 (Tracheal Epithelial Cells, donor2)
- 11441-118I1 (Tracheal Epithelial Cells, donor3)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
- 11457-119A8 (Bronchial Epithelial Cell, donor5)
- 11461-119B3 (Bronchial Epithelial Cell, donor6)
- 11510-119G7 (Alveolar Epithelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002202 (epithelial cell of tracheobronchial tree), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data