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FF:11836-124G9: Difference between revisions

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|def=
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.81!63.45!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.63!111.56!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.56!39.81!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.46!27.79!HOXC5;;chr17:1959369..1959388,+!p2@HIC1!1.39!60.13!HIC1;;chr5:92918919..92918942,+!p1@NR2F1!1.38!99.11!NR2F1;;chr11:46299539..46299620,+!p2@CREB3L1!1.35!36.08!CREB3L1;;chr11:46299199..46299233,+!p1@CREB3L1!1.34!104.51!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.33!49.35!FOXC2;;chr18:19749541..19749557,+!p1@GATA6!1.31!60.55!GATA6;;chr2:239756671..239756732,+!p1@TWIST2!1.26!54.74!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!1.26!45.62!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!1.26!24.47!GATA6;;chr1:170632959..170632987,+!p4@PRRX1!1.26!18.66!PRRX1;;chr12:66218598..66218645,+!p2@HMGA2!1.23!73.40!HMGA2;;chr12:54422217..54422239,+!p3@HOXC6!1.21!15.34!HOXC6;;chr12:54402745..54402788,+!p1@HOXC8!1.19!14.51!HOXC8;;chr19:13134772..13134822,+!p2@NFIX!1.14!18.66!NFIX;;chr2:102091144..102091183,-!p2@RFX8!1.13!12.44!RFX8;;chr19:45971246..45971265,+!p1@FOSB!1.11!220.62!FOSB;;chr20:50179368..50179392,-!p2@NFATC2!1.10!14.93!NFATC2;;chr11:32457075..32457095,-!p1@WT1!1.09!11.20!WT1;;chr12:52445218..52445237,+!p1@NR4A1!1.07!136.44!NR4A1;;chr2:239756739..239756755,+!p2@TWIST2!1.07!18.66!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!1.04!14.51!HMGA2;;chr2:66662281..66662308,+!p1@MEIS1!1.02!33.18!MEIS1;;chr1:170633348..170633399,+!p2@PRRX1!1.02!12.86!PRRX1;;chr15:67430351..67430366,+!p10@SMAD3!1.02!9.54!SMAD3;;chr15:96874145..96874166,+!p7@NR2F2!1.00!17.42!NR2F2;;chr12:66218183..66218209,+!p4@HMGA2!1.00!17.42!HMGA2;;chr15:96874012..96874042,+!p2@NR2F2!0.99!81.70!NR2F2;;chr8:106330656..106330684,+!p1@ZFPM2!0.98!22.81!ZFPM2;;chr11:65686802..65686818,+!p6@DRAP1!0.98!14.93!DRAP1;;chr12:54402790..54402805,+!p2@HOXC8!0.97!8.29!HOXC8;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.29!HOXD8;;chr12:66218836..66218888,+!p1@HMGA2!0.96!78.79!HMGA2;;chr15:96874244..96874259,+!p5@NR2F2!0.95!19.49!NR2F2;;chr1:170633262..170633285,+!p3@PRRX1!0.95!9.12!PRRX1;;chr5:92918956..92918969,+!p4@NR2F1!0.95!8.71!NR2F1;;chr2:102091566..102091581,-!p1@RFX8!0.95!7.88!RFX8;;chr9:16705069..16705086,-!p3@BNC2!0.95!7.88!BNC2;;chr19:13134457..13134462,+!p5@NFIX!0.93!13.69!NFIX;;chr4:81104985..81105005,+!p4@PRDM8!0.93!9.12!PRDM8;;chr8:93107451..93107468,-!p2@RUNX1T1!0.93!7.46!RUNX1T1;;chr15:96873984..96873999,+!p3@NR2F2!0.92!55.99!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!0.92!15.76!SOX15;;chr11:65687362..65687436,+!p3@DRAP1!0.91!33.59!DRAP1;;chr4:81105027..81105039,+!p3@PRDM8!0.91!8.29!PRDM8;;chr19:54041669..54041697,+!p2@ZNF331!0.91!7.05!ZNF331;;chr18:19749517..19749531,+!p3@GATA6!0.90!12.86!GATA6;;chr18:53068911..53068935,-!p4@TCF4!0.90!7.88!TCF4;;chr5:92918894..92918912,+!p2@NR2F1!0.88!22.39!NR2F1;;chr17:46622070..46622109,-!p1@HOXB2!0.88!15.34!HOXB2;;chr21:36260343..36260402,-!p6@RUNX1!0.88!10.78!RUNX1;;chr11:46299186..46299195,+!p3@CREB3L1!0.88!7.46!CREB3L1;;chr16:31076332..31076388,-!p3@ZNF668!0.88!6.64!ZNF668;;chr19:13135386..13135435,+!p4@NFIX!0.88!6.64!NFIX;;chr9:102584262..102584276,+!p1@NR4A3!0.87!14.93!NR4A3;;chr3:141121847..141121868,+!p5@ZBTB38!0.87!9.95!ZBTB38;;chr7:44143925..44143970,+!p1@AEBP1!0.86!148.05!AEBP1;;chr8:99956662..99956684,+!p1@OSR2!0.86!9.95!OSR2;;chr8:40755333..40755352,-!p1@ZMAT4!0.86!6.22!ZMAT4;;chr12:54410948..54410992,+!p3@HOXC5!0.86!6.22!HOXC5;;chr17:1958388..1958404,+!p1@HIC1!0.85!41.47!HIC1;;chr2:157189180..157189290,-!p1@NR4A2!0.83!32.35!NR4A2;;chr17:46621937..46621966,-!p2@HOXB2!0.83!16.59!HOXB2;;chr1:170632250..170632277,+!p7@PRRX1!0.83!5.81!PRRX1;;chr9:110252035..110252057,-!p1@KLF4!0.82!97.04!KLF4;;chr5:137804484..137804498,+!p2@EGR1!0.81!23.64!EGR1;;chr15:96874216..96874236,+!p13@NR2F2!0.81!8.71!NR2F2;;chr8:106330696..106330719,+!p2@ZFPM2!0.81!7.05!ZFPM2;;chr19:46801639..46801699,+!p1@HIF3A!0.81!5.39!HIF3A;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.81!5.39!HOXC5;;chr5:92919100..92919135,+!p3@NR2F1!0.80!6.64!NR2F1;;chr7:44143978..44143989,+!p2@AEBP1!0.79!9.95!AEBP1;;chr19:31840130..31840160,-!p2@TSHZ3!0.79!8.29!TSHZ3;;chr3:141087393..141087426,+!p3@ZBTB38!0.78!21.56!ZBTB38;;chr2:66662396..66662407,+!p4@MEIS1!0.78!4.98!MEIS1;;chr11:46333934..46333963,+!p5@CREB3L1!0.78!4.98!CREB3L1;;chr8:25902876..25902936,-!p1@EBF2!0.78!4.98!EBF2;;chr19:54058073..54058088,+!p1@ZNF331!0.78!4.98!ZNF331;;chr1:170632723..170632739,+!p8@PRRX1!0.78!4.98!PRRX1;;chr15:96874927..96874938,+!p8@NR2F2!0.77!11.20!NR2F2;;chr21:36260295..36260310,-!p3@RUNX1!0.77!8.29!RUNX1;;chr6:34204921..34204939,+!p3@HMGA1!0.76!156.76!HMGA1;;chr15:96869511..96869525,+!p16@NR2F2!0.76!5.39!NR2F2;;chr8:49833978..49833996,-!p1@SNAI2!0.75!106.16!SNAI2;;chr5:158526917..158526932,-!p1@EBF1!0.75!12.44!EBF1;;chr3:5021268..5021282,+!p4@BHLHE40!0.75!9.95!BHLHE40;;chr2:66662510..66662521,+!p6@MEIS1!0.75!4.56!MEIS1;;chr6:28321909..28321965,-!p3@ZNF323!0.75!4.56!ZNF323;;chr11:46299443..46299459,+!p4@CREB3L1!0.75!4.56!CREB3L1;;chr12:54447637..54447659,+!p4@HOXC4!0.75!4.56!HOXC4;;chr12:54447686..54447704,+!p5@HOXC4!0.75!4.56!HOXC4;;chr11:65686732..65686756,+!p2@DRAP1!0.74!20.74!DRAP1;;chr6:106546808..106546833,+!p3@PRDM1!0.74!5.81!PRDM1;;chr17:70117153..70117174,+!p1@SOX9!0.73!50.18!SOX9;;chr7:44143997..44144008,+!p3@AEBP1!0.73!5.81!AEBP1;;chr1:151032860..151032918,+!p1@MLLT11!0.71!55.99!MLLT11;;chr17:46622114..46622138,-!p4@HOXB2!0.71!6.64!HOXB2;;chr3:141121820..141121838,+!p9@ZBTB38!0.71!4.15!ZBTB38;;chr12:54402729..54402743,+!p3@HOXC8!0.71!4.15!HOXC8;;chr12:54422245..54422263,+!p7@HOXC6!0.71!4.15!HOXC6;;chr12:115121962..115121987,-!p1@TBX3!0.70!38.57!TBX3;;chr11:65687158..65687216,+!p4@DRAP1!0.70!25.71!DRAP1;;chr2:66662249..66662267,+!p2@MEIS1!0.70!17.42!MEIS1;;chr6:85473156..85473210,-!p2@TBX18!0.70!4.98!TBX18;;chr14:75745523..75745537,+!p1@FOS!0.69!542.02!FOS;;chr15:96873921..96873946,+!p1@NR2F2!0.69!125.66!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.69!23.22!ETV1;;chr19:31840313..31840380,-!p1@TSHZ3!0.68!10.78!TSHZ3;;chr11:65687222..65687240,+!p7@DRAP1!0.68!4.98!DRAP1;;chr5:92919375..92919438,+!p6@NR2F1!0.68!4.15!NR2F1;;chr5:142780237..142780261,-!p7@NR3C1!0.68!3.73!NR3C1;;chr12:54426831..54426836,+!p10@HOXC5!0.68!3.73!HOXC5;;chr1:170632115..170632136,+!p9@PRRX1!0.68!3.73!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.68!3.73!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.68!3.73!KLF17;;chr15:96869206..96869220,+!p21@NR2F2!0.68!3.73!NR2F2;;chr16:86600870..86600921,+!p2@FOXC2!0.68!3.73!FOXC2;;chr2:102091478..102091490,-!p3@RFX8!0.68!3.73!RFX8;;chr2:19558327..19558334,-!p2@OSR1!0.68!3.73!OSR1;;chr8:49833948..49833973,-!p2@SNAI2!0.67!26.96!SNAI2;;chr9:2158443..2158481,+!p2@SMARCA2!0.67!11.61!SMARCA2;;chr6:34204672..34204692,+!p1@HMGA1!0.66!471.52!HMGA1;;chr1:158979792..158979814,+!p2@IFI16!0.66!39.81!IFI16;;chr7:19157043..19157088,-!p2@TWIST1!0.66!9.95!TWIST1;;chr9:102584159..102584174,+!p2@NR4A3!0.66!7.05!NR4A3;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.39!NR2F2;;chr12:54447599..54447630,+!p3@HOXC4!0.66!4.56!HOXC4;;chr19:13106214..13106382,+!p1@NFIX!0.65!94.97!NFIX;;chr12:124873357..124873401,-!p1@NCOR2!0.65!47.28!NCOR2;;chr12:66218378..66218401,+!p6@HMGA2!0.65!5.81!HMGA2;;chr12:72056800..72056834,+!p1@THAP2!0.65!4.98!THAP2;;chr5:137801160..137801176,+!p1@EGR1!0.64!397.70!EGR1;;chr15:37392724..37392757,-!p1@MEIS2!0.64!17.83!MEIS2;;chr3:114343768..114343822,-!p1@ZBTB20!0.64!17.00!ZBTB20;;chr2:121493425..121493474,+!p1@GLI2!0.64!8.29!GLI2;;chr15:96869255..96869291,+!p6@NR2F2!0.64!6.64!NR2F2;;chr12:66218573..66218596,+!p7@HMGA2!0.64!5.39!HMGA2;;chr5:92919068..92919082,+!p5@NR2F1!0.64!4.15!NR2F1;;chr6:28321971..28321995,-!p1@ZNF323!0.64!3.32!ZNF323;;chr12:54393880..54393962,+!p1@HOXC9!0.64!3.32!HOXC9;;chr12:54422268..54422278,+!p8@HOXC6!0.64!3.32!HOXC6;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.32!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.32!HMGA2;;chr15:67430381..67430396,+!p21@SMAD3!0.64!3.32!SMAD3;;chr16:86601052..86601066,+!p4@FOXC2!0.64!3.32!FOXC2;;chr18:19749353..19749367,+!p4@GATA6!0.64!3.32!GATA6;;chr1:170633058..170633084,+!p5@PRRX1!0.64!3.32!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.63!16.17!ZFHX4;;chr11:65667884..65667895,-!p2@FOSL1!0.63!14.51!FOSL1;;chr15:96881221..96881240,+!p19@NR2F2!0.63!4.56!NR2F2;;chr7:14029312..14029325,-!p4@ETV1!0.63!4.15!ETV1;;chr1:158979872..158979898,+!p3@IFI16!0.62!11.20!IFI16;;chr19:22235279..22235301,+!p1@ZNF257!0.62!6.64!ZNF257;;chr17:38256799..38256815,-!p3@NR1D1!0.62!6.22!NR1D1;;chr16:86544113..86544145,+!p1@FOXF1!0.62!4.15!FOXF1;;chr2:66662895..66662907,+!p3@MEIS1!0.62!4.15!MEIS1;;chr15:96874063..96874074,+!p10@NR2F2!0.61!6.22!NR2F2;;chr12:66218443..66218461,+!p8@HMGA2!0.61!4.15!HMGA2;;chr2:145275162..145275202,-!p2@ZEB2!0.60!21.15!ZEB2;;chr2:121493492..121493537,+!p2@GLI2!0.60!5.39!GLI2;;chr9:110251836..110251887,-!p4@KLF4!0.60!4.15!KLF4;;chr10:64134120..64134183,+!p1@ZNF365!0.60!3.73!ZNF365;;chr15:37392576..37392589,-!p12@MEIS2!0.60!3.73!MEIS2;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.15!NR2F2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.32!HOXB2;;chr5:92918860..92918871,+!p10@NR2F1!0.59!3.32!NR2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.59!3.32!ZNF385D;;chr2:66662697..66662711,+!p8@MEIS1!0.59!2.90!MEIS1;;chr6:152011654..152011682,+!p1@ESR1!0.59!2.90!ESR1;;chr8:77593448..77593471,+!p2@ZFHX4!0.59!2.90!ZFHX4;;chr8:93115274..93115323,-!p4@RUNX1T1!0.59!2.90!RUNX1T1;;chr16:86600458..86600461,+!p3@FOXC2!0.59!2.90!FOXC2;;chr9:16728327..16728338,-!p5@BNC2!0.59!2.90!BNC2;;chr11:32456954..32456965,-!p4@WT1!0.59!2.90!WT1;;chr12:45444873..45444888,-!p1@DBX2!0.59!2.90!DBX2;;chr12:66357214..66357233,+!p13@HMGA2!0.59!2.90!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.59!2.90!HMGA2;;chr1:170632477..170632506,+!p6@PRRX1!0.59!2.90!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.59!2.90!PRRX1;;chr1:170633194..170633205,+!p18@PRRX1!0.59!2.90!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.59!2.90!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.59!2.90!LHX9;;chr14:62203595..62203676,+!p4@H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|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.81!63.45!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.63!111.56!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.56!39.81!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.46!27.79!HOXC5;;chr17:1959369..1959388,+!p2@HIC1!1.39!60.13!HIC1;;chr5:92918919..92918942,+!p1@NR2F1!1.38!99.11!NR2F1;;chr11:46299539..46299620,+!p2@CREB3L1!1.35!36.08!CREB3L1;;chr11:46299199..46299233,+!p1@CREB3L1!1.34!104.51!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.33!49.35!FOXC2;;chr18:19749541..19749557,+!p1@GATA6!1.31!60.55!GATA6;;chr2:239756671..239756732,+!p1@TWIST2!1.26!54.74!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!1.26!45.62!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!1.26!24.47!GATA6;;chr1:170632959..170632987,+!p4@PRRX1!1.26!18.66!PRRX1;;chr12:66218598..66218645,+!p2@HMGA2!1.23!73.40!HMGA2;;chr12:54422217..54422239,+!p3@HOXC6!1.21!15.34!HOXC6;;chr12:54402745..54402788,+!p1@HOXC8!1.19!14.51!HOXC8;;chr19:13134772..13134822,+!p2@NFIX!1.14!18.66!NFIX;;chr2:102091144..102091183,-!p2@RFX8!1.13!12.44!RFX8;;chr19:45971246..45971265,+!p1@FOSB!1.11!220.62!FOSB;;chr20:50179368..50179392,-!p2@NFATC2!1.10!14.93!NFATC2;;chr11:32457075..32457095,-!p1@WT1!1.09!11.20!WT1;;chr12:52445218..52445237,+!p1@NR4A1!1.07!136.44!NR4A1;;chr2:239756739..239756755,+!p2@TWIST2!1.07!18.66!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!1.04!14.51!HMGA2;;chr2:66662281..66662308,+!p1@MEIS1!1.02!33.18!MEIS1;;chr1:170633348..170633399,+!p2@PRRX1!1.02!12.86!PRRX1;;chr15:67430351..67430366,+!p10@SMAD3!1.02!9.54!SMAD3;;chr15:96874145..96874166,+!p7@NR2F2!1.00!17.42!NR2F2;;chr12:66218183..66218209,+!p4@HMGA2!1.00!17.42!HMGA2;;chr15:96874012..96874042,+!p2@NR2F2!0.99!81.70!NR2F2;;chr8:106330656..106330684,+!p1@ZFPM2!0.98!22.81!ZFPM2;;chr11:65686802..65686818,+!p6@DRAP1!0.98!14.93!DRAP1;;chr12:54402790..54402805,+!p2@HOXC8!0.97!8.29!HOXC8;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.29!HOXD8;;chr12:66218836..66218888,+!p1@HMGA2!0.96!78.79!HMGA2;;chr15:96874244..96874259,+!p5@NR2F2!0.95!19.49!NR2F2;;chr1:170633262..170633285,+!p3@PRRX1!0.95!9.12!PRRX1;;chr5:92918956..92918969,+!p4@NR2F1!0.95!8.71!NR2F1;;chr2:102091566..102091581,-!p1@RFX8!0.95!7.88!RFX8;;chr9:16705069..16705086,-!p3@BNC2!0.95!7.88!BNC2;;chr19:13134457..13134462,+!p5@NFIX!0.93!13.69!NFIX;;chr4:81104985..81105005,+!p4@PRDM8!0.93!9.12!PRDM8;;chr8:93107451..93107468,-!p2@RUNX1T1!0.93!7.46!RUNX1T1;;chr15:96873984..96873999,+!p3@NR2F2!0.92!55.99!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!0.92!15.76!SOX15;;chr11:65687362..65687436,+!p3@DRAP1!0.91!33.59!DRAP1;;chr4:81105027..81105039,+!p3@PRDM8!0.91!8.29!PRDM8;;chr19:54041669..54041697,+!p2@ZNF331!0.91!7.05!ZNF331;;chr18:19749517..19749531,+!p3@GATA6!0.90!12.86!GATA6;;chr18:53068911..53068935,-!p4@TCF4!0.90!7.88!TCF4;;chr5:92918894..92918912,+!p2@NR2F1!0.88!22.39!NR2F1;;chr17:46622070..46622109,-!p1@HOXB2!0.88!15.34!HOXB2;;chr21:36260343..36260402,-!p6@RUNX1!0.88!10.78!RUNX1;;chr11:46299186..46299195,+!p3@CREB3L1!0.88!7.46!CREB3L1;;chr16:31076332..31076388,-!p3@ZNF668!0.88!6.64!ZNF668;;chr19:13135386..13135435,+!p4@NFIX!0.88!6.64!NFIX;;chr9:102584262..102584276,+!p1@NR4A3!0.87!14.93!NR4A3;;chr3:141121847..141121868,+!p5@ZBTB38!0.87!9.95!ZBTB38;;chr7:44143925..44143970,+!p1@AEBP1!0.86!148.05!AEBP1;;chr8:99956662..99956684,+!p1@OSR2!0.86!9.95!OSR2;;chr8:40755333..40755352,-!p1@ZMAT4!0.86!6.22!ZMAT4;;chr12:54410948..54410992,+!p3@HOXC5!0.86!6.22!HOXC5;;chr17:1958388..1958404,+!p1@HIC1!0.85!41.47!HIC1;;chr2:157189180..157189290,-!p1@NR4A2!0.83!32.35!NR4A2;;chr17:46621937..46621966,-!p2@HOXB2!0.83!16.59!HOXB2;;chr1:170632250..170632277,+!p7@PRRX1!0.83!5.81!PRRX1;;chr9:110252035..110252057,-!p1@KLF4!0.82!97.04!KLF4;;chr5:137804484..137804498,+!p2@EGR1!0.81!23.64!EGR1;;chr15:96874216..96874236,+!p13@NR2F2!0.81!8.71!NR2F2;;chr8:106330696..106330719,+!p2@ZFPM2!0.81!7.05!ZFPM2;;chr19:46801639..46801699,+!p1@HIF3A!0.81!5.39!HIF3A;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.81!5.39!HOXC5;;chr5:92919100..92919135,+!p3@NR2F1!0.80!6.64!NR2F1;;chr7:44143978..44143989,+!p2@AEBP1!0.79!9.95!AEBP1;;chr19:31840130..31840160,-!p2@TSHZ3!0.79!8.29!TSHZ3;;chr3:141087393..141087426,+!p3@ZBTB38!0.78!21.56!ZBTB38;;chr2:66662396..66662407,+!p4@MEIS1!0.78!4.98!MEIS1;;chr11:46333934..46333963,+!p5@CREB3L1!0.78!4.98!CREB3L1;;chr8:25902876..25902936,-!p1@EBF2!0.78!4.98!EBF2;;chr19:54058073..54058088,+!p1@ZNF331!0.78!4.98!ZNF331;;chr1:170632723..170632739,+!p8@PRRX1!0.78!4.98!PRRX1;;chr15:96874927..96874938,+!p8@NR2F2!0.77!11.20!NR2F2;;chr21:36260295..36260310,-!p3@RUNX1!0.77!8.29!RUNX1;;chr6:34204921..34204939,+!p3@HMGA1!0.76!156.76!HMGA1;;chr15:96869511..96869525,+!p16@NR2F2!0.76!5.39!NR2F2;;chr8:49833978..49833996,-!p1@SNAI2!0.75!106.16!SNAI2;;chr5:158526917..158526932,-!p1@EBF1!0.75!12.44!EBF1;;chr3:5021268..5021282,+!p4@BHLHE40!0.75!9.95!BHLHE40;;chr2:66662510..66662521,+!p6@MEIS1!0.75!4.56!MEIS1;;chr6:28321909..28321965,-!p3@ZNF323!0.75!4.56!ZNF323;;chr11:46299443..46299459,+!p4@CREB3L1!0.75!4.56!CREB3L1;;chr12:54447637..54447659,+!p4@HOXC4!0.75!4.56!HOXC4;;chr12:54447686..54447704,+!p5@HOXC4!0.75!4.56!HOXC4;;chr11:65686732..65686756,+!p2@DRAP1!0.74!20.74!DRAP1;;chr6:106546808..106546833,+!p3@PRDM1!0.74!5.81!PRDM1;;chr17:70117153..70117174,+!p1@SOX9!0.73!50.18!SOX9;;chr7:44143997..44144008,+!p3@AEBP1!0.73!5.81!AEBP1;;chr1:151032860..151032918,+!p1@MLLT11!0.71!55.99!MLLT11;;chr17:46622114..46622138,-!p4@HOXB2!0.71!6.64!HOXB2;;chr3:141121820..141121838,+!p9@ZBTB38!0.71!4.15!ZBTB38;;chr12:54402729..54402743,+!p3@HOXC8!0.71!4.15!HOXC8;;chr12:54422245..54422263,+!p7@HOXC6!0.71!4.15!HOXC6;;chr12:115121962..115121987,-!p1@TBX3!0.70!38.57!TBX3;;chr11:65687158..65687216,+!p4@DRAP1!0.70!25.71!DRAP1;;chr2:66662249..66662267,+!p2@MEIS1!0.70!17.42!MEIS1;;chr6:85473156..85473210,-!p2@TBX18!0.70!4.98!TBX18;;chr14:75745523..75745537,+!p1@FOS!0.69!542.02!FOS;;chr15:96873921..96873946,+!p1@NR2F2!0.69!125.66!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.69!23.22!ETV1;;chr19:31840313..31840380,-!p1@TSHZ3!0.68!10.78!TSHZ3;;chr11:65687222..65687240,+!p7@DRAP1!0.68!4.98!DRAP1;;chr5:92919375..92919438,+!p6@NR2F1!0.68!4.15!NR2F1;;chr5:142780237..142780261,-!p7@NR3C1!0.68!3.73!NR3C1;;chr12:54426831..54426836,+!p10@HOXC5!0.68!3.73!HOXC5;;chr1:170632115..170632136,+!p9@PRRX1!0.68!3.73!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.68!3.73!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.68!3.73!KLF17;;chr15:96869206..96869220,+!p21@NR2F2!0.68!3.73!NR2F2;;chr16:86600870..86600921,+!p2@FOXC2!0.68!3.73!FOXC2;;chr2:102091478..102091490,-!p3@RFX8!0.68!3.73!RFX8;;chr2:19558327..19558334,-!p2@OSR1!0.68!3.73!OSR1;;chr8:49833948..49833973,-!p2@SNAI2!0.67!26.96!SNAI2;;chr9:2158443..2158481,+!p2@SMARCA2!0.67!11.61!SMARCA2;;chr6:34204672..34204692,+!p1@HMGA1!0.66!471.52!HMGA1;;chr1:158979792..158979814,+!p2@IFI16!0.66!39.81!IFI16;;chr7:19157043..19157088,-!p2@TWIST1!0.66!9.95!TWIST1;;chr9:102584159..102584174,+!p2@NR4A3!0.66!7.05!NR4A3;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.39!NR2F2;;chr12:54447599..54447630,+!p3@HOXC4!0.66!4.56!HOXC4;;chr19:13106214..13106382,+!p1@NFIX!0.65!94.97!NFIX;;chr12:124873357..124873401,-!p1@NCOR2!0.65!47.28!NCOR2;;chr12:66218378..66218401,+!p6@HMGA2!0.65!5.81!HMGA2;;chr12:72056800..72056834,+!p1@THAP2!0.65!4.98!THAP2;;chr5:137801160..137801176,+!p1@EGR1!0.64!397.70!EGR1;;chr15:37392724..37392757,-!p1@MEIS2!0.64!17.83!MEIS2;;chr3:114343768..114343822,-!p1@ZBTB20!0.64!17.00!ZBTB20;;chr2:121493425..121493474,+!p1@GLI2!0.64!8.29!GLI2;;chr15:96869255..96869291,+!p6@NR2F2!0.64!6.64!NR2F2;;chr12:66218573..66218596,+!p7@HMGA2!0.64!5.39!HMGA2;;chr5:92919068..92919082,+!p5@NR2F1!0.64!4.15!NR2F1;;chr6:28321971..28321995,-!p1@ZNF323!0.64!3.32!ZNF323;;chr12:54393880..54393962,+!p1@HOXC9!0.64!3.32!HOXC9;;chr12:54422268..54422278,+!p8@HOXC6!0.64!3.32!HOXC6;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.32!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.32!HMGA2;;chr15:67430381..67430396,+!p21@SMAD3!0.64!3.32!SMAD3;;chr16:86601052..86601066,+!p4@FOXC2!0.64!3.32!FOXC2;;chr18:19749353..19749367,+!p4@GATA6!0.64!3.32!GATA6;;chr1:170633058..170633084,+!p5@PRRX1!0.64!3.32!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.63!16.17!ZFHX4;;chr11:65667884..65667895,-!p2@FOSL1!0.63!14.51!FOSL1;;chr15:96881221..96881240,+!p19@NR2F2!0.63!4.56!NR2F2;;chr7:14029312..14029325,-!p4@ETV1!0.63!4.15!ETV1;;chr1:158979872..158979898,+!p3@IFI16!0.62!11.20!IFI16;;chr19:22235279..22235301,+!p1@ZNF257!0.62!6.64!ZNF257;;chr17:38256799..38256815,-!p3@NR1D1!0.62!6.22!NR1D1;;chr16:86544113..86544145,+!p1@FOXF1!0.62!4.15!FOXF1;;chr2:66662895..66662907,+!p3@MEIS1!0.62!4.15!MEIS1;;chr15:96874063..96874074,+!p10@NR2F2!0.61!6.22!NR2F2;;chr12:66218443..66218461,+!p8@HMGA2!0.61!4.15!HMGA2;;chr2:145275162..145275202,-!p2@ZEB2!0.60!21.15!ZEB2;;chr2:121493492..121493537,+!p2@GLI2!0.60!5.39!GLI2;;chr9:110251836..110251887,-!p4@KLF4!0.60!4.15!KLF4;;chr10:64134120..64134183,+!p1@ZNF365!0.60!3.73!ZNF365;;chr15:37392576..37392589,-!p12@MEIS2!0.60!3.73!MEIS2;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.15!NR2F2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.32!HOXB2;;chr5:92918860..92918871,+!p10@NR2F1!0.59!3.32!NR2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.59!3.32!ZNF385D;;chr2:66662697..66662711,+!p8@MEIS1!0.59!2.90!MEIS1;;chr6:152011654..152011682,+!p1@ESR1!0.59!2.90!ESR1;;chr8:77593448..77593471,+!p2@ZFHX4!0.59!2.90!ZFHX4;;chr8:93115274..93115323,-!p4@RUNX1T1!0.59!2.90!RUNX1T1;;chr16:86600458..86600461,+!p3@FOXC2!0.59!2.90!FOXC2;;chr9:16728327..16728338,-!p5@BNC2!0.59!2.90!BNC2;;chr11:32456954..32456965,-!p4@WT1!0.59!2.90!WT1;;chr12:45444873..45444888,-!p1@DBX2!0.59!2.90!DBX2;;chr12:66357214..66357233,+!p13@HMGA2!0.59!2.90!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.59!2.90!HMGA2;;chr1:170632477..170632506,+!p6@PRRX1!0.59!2.90!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.59!2.90!PRRX1;;chr1:170633194..170633205,+!p18@PRRX1!0.59!2.90!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.59!2.90!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.59!2.90!LHX9;;chr14:62203595..62203676,+!p4@H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|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
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Revision as of 22:05, 9 July 2012


Name:mesenchymal precursor cell - ovarian cancer left ovary, donor4
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueovary
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.1
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0535
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00976
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.132
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.269
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.351
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0928
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0422
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0116
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.667
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00636
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.457
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0133
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.262
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.262
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.151
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.425
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.425
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.365
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.425
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.488
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.686
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data no result for this sample


TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13094

Jaspar motifP-value
MA0002.20.668
MA0003.10.905
MA0004.10.127
MA0006.10.95
MA0007.10.378
MA0009.10.759
MA0014.10.401
MA0017.10.709
MA0018.21.24264e-5
MA0019.10.227
MA0024.19.85074e-4
MA0025.16.26562e-4
MA0027.10.299
MA0028.10.017
MA0029.10.882
MA0030.10.00176
MA0031.10.0606
MA0035.20.0143
MA0038.13.56012e-4
MA0039.20.0353
MA0040.10.766
MA0041.10.811
MA0042.10.839
MA0043.11.80647e-6
MA0046.10.111
MA0047.20.798
MA0048.10.482
MA0050.10.139
MA0051.10.071
MA0052.10.0918
MA0055.10.652
MA0057.10.498
MA0058.10.0659
MA0059.10.826
MA0060.12.75066e-15
MA0061.10.954
MA0062.21.51486e-7
MA0065.20.775
MA0066.10.641
MA0067.10.0338
MA0068.10.0221
MA0069.10.425
MA0070.10.596
MA0071.10.632
MA0072.10.0997
MA0073.10.92
MA0074.10.16
MA0076.16.72387e-4
MA0077.10.197
MA0078.10.63
MA0079.20.126
MA0080.22.8403e-7
MA0081.10.00338
MA0083.10.0297
MA0084.10.0504
MA0087.10.976
MA0088.10.826
MA0090.10.0097
MA0091.10.111
MA0092.10.381
MA0093.10.152
MA0099.28.05117e-4
MA0100.10.463
MA0101.10.0333
MA0102.20.137
MA0103.10.00859
MA0104.20.335
MA0105.10.00102
MA0106.10.135
MA0107.10.0201
MA0108.20.431
MA0111.10.475
MA0112.20.00216
MA0113.10.647
MA0114.10.712
MA0115.10.187
MA0116.13.38522e-4
MA0117.10.705
MA0119.10.00729
MA0122.10.253
MA0124.10.136
MA0125.10.202
MA0131.10.505
MA0135.10.224
MA0136.16.49593e-9
MA0137.20.96
MA0138.20.863
MA0139.10.655
MA0140.10.229
MA0141.10.528
MA0142.10.112
MA0143.10.81
MA0144.10.357
MA0145.10.657
MA0146.10.356
MA0147.10.872
MA0148.10.675
MA0149.10.736
MA0150.10.179
MA0152.10.0282
MA0153.10.867
MA0154.10.0617
MA0155.10.831
MA0156.11.86458e-5
MA0157.10.244
MA0159.10.615
MA0160.10.106
MA0162.10.347
MA0163.11.73058e-6
MA0164.10.663
MA0258.10.409
MA0259.10.659



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13094

Novel motifP-value
10.186
100.105
1000.486
1010.688
1020.487
1030.193
1040.937
1050.0056
1060.0666
1070.0332
1080.61
1090.842
110.14
1100.0643
1110.628
1120.463
1130.182
1140.0144
1150.0308
1160.0748
1170.26
1180.875
1190.738
120.201
1200.166
1210.915
1220.0377
1230.102
1240.956
1250.448
1260.725
1270.871
1280.312
1290.236
130.966
1300.937
1310.351
1320.868
1330.418
1340.471
1350.667
1360.296
1370.86
1380.899
1390.457
140.123
1400.477
1410.663
1420.37
1430.554
1440.228
1450.144
1460.615
1470.138
1480.0147
1490.353
150.29
1500.216
1510.714
1520.431
1530.524
1540.717
1550.0891
1560.338
1570.844
1580.0678
1590.108
160.0246
1600.124
1610.495
1620.466
1630.241
1640.0583
1650.374
1660.00371
1670.97
1680.403
1690.0772
170.289
180.0942
190.0611
20.476
200.416
210.286
220.507
230.0223
240.761
250.189
260.118
270.485
280.232
290.0912
30.109
300.937
310.561
321.40416e-7
330.7
340.79
350.293
360.254
370.027
380.694
390.0944
40.248
400.495
410.641
420.412
430.23
440.348
450.627
460.0283
470.488
480.33
490.917
50.564
500.526
510.593
520.998
530.208
540.367
550.271
560.8
570.459
580.969
590.0775
60.187
600.62
610.678
620.33
630.161
640.958
650.266
660.295
670.653
680.626
690.748
70.462
700.115
710.0421
720.419
730.311
740.291
750.459
760.777
770.0444
780.693
790.0342
80.0187
800.473
810.178
820.256
830.637
840.687
850.137
860.253
870.965
880.565
890.0691
90.385
900.114
910.14
920.203
930.909
940.661
950.837
960.689
970.422
980.243
990.0288



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13094


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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