FF:13433-144E4: Difference between revisions

Revision as of 23:52, 9 July 2012

Name:	iPS differentiation to neuron, control donor C32-CRL1502, day00, rep1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	female
age	12wk gestation
cell type	fibroblast-derived iPS
cell line	NA
company	NA
collaboration	Christine Wells (University of Queensland)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.107
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.587
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0.0898
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0.84
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0733
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.301
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.106
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0343
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0324
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.056
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0259
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0.106
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.743
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.698
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.00985
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.056
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.573
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.056
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.569
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.106
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0.721
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13826

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00295
MA0003.1	MA0003.1	0.0596
MA0004.1	MA0004.1	0.966
MA0006.1	MA0006.1	0.474
MA0007.1	MA0007.1	0.848
MA0009.1	MA0009.1	0.401
MA0014.1	MA0014.1	0.178
MA0017.1	MA0017.1	0.0264
MA0018.2	MA0018.2	0.0852
MA0019.1	MA0019.1	0.915
MA0024.1	MA0024.1	1.2888e-5
MA0025.1	MA0025.1	0.601
MA0027.1	MA0027.1	0.252
MA0028.1	MA0028.1	0.0952
MA0029.1	MA0029.1	0.754
MA0030.1	MA0030.1	0.358
MA0031.1	MA0031.1	0.325
MA0035.2	MA0035.2	0.812
MA0038.1	MA0038.1	0.00339
MA0039.2	MA0039.2	0.024
MA0040.1	MA0040.1	0.42
MA0041.1	MA0041.1	0.0637
MA0042.1	MA0042.1	0.413
MA0043.1	MA0043.1	0.352
MA0046.1	MA0046.1	0.319
MA0047.2	MA0047.2	0.0709
MA0048.1	MA0048.1	0.431
MA0050.1	MA0050.1	5.90262e-5
MA0051.1	MA0051.1	0.00551
MA0052.1	MA0052.1	0.0847
MA0055.1	MA0055.1	0.281
MA0057.1	MA0057.1	0.333
MA0058.1	MA0058.1	0.969
MA0059.1	MA0059.1	0.958
MA0060.1	MA0060.1	1.12106e-13
MA0061.1	MA0061.1	0.0274
MA0062.2	MA0062.2	0.489
MA0065.2	MA0065.2	0.578
MA0066.1	MA0066.1	0.256
MA0067.1	MA0067.1	0.229
MA0068.1	MA0068.1	0.00452
MA0069.1	MA0069.1	0.537
MA0070.1	MA0070.1	0.306
MA0071.1	MA0071.1	0.978
MA0072.1	MA0072.1	0.964
MA0073.1	MA0073.1	0.888
MA0074.1	MA0074.1	0.774
MA0076.1	MA0076.1	0.129
MA0077.1	MA0077.1	0.0763
MA0078.1	MA0078.1	0.935
MA0079.2	MA0079.2	0.31
MA0080.2	MA0080.2	3.07425e-12
MA0081.1	MA0081.1	0.0951
MA0083.1	MA0083.1	0.0359
MA0084.1	MA0084.1	0.964
MA0087.1	MA0087.1	0.714
MA0088.1	MA0088.1	0.932
MA0090.1	MA0090.1	0.801
MA0091.1	MA0091.1	0.0267
MA0092.1	MA0092.1	0.0822
MA0093.1	MA0093.1	0.895
MA0099.2	MA0099.2	1.02161e-12
MA0100.1	MA0100.1	0.941
MA0101.1	MA0101.1	0.148
MA0102.2	MA0102.2	0.00962
MA0103.1	MA0103.1	0.114
MA0104.2	MA0104.2	0.892
MA0105.1	MA0105.1	0.00585
MA0106.1	MA0106.1	0.856
MA0107.1	MA0107.1	0.0795
MA0108.2	MA0108.2	1.41154e-4
MA0111.1	MA0111.1	0.763
MA0112.2	MA0112.2	1.77431e-5
MA0113.1	MA0113.1	0.0209
MA0114.1	MA0114.1	0.289
MA0115.1	MA0115.1	0.909
MA0116.1	MA0116.1	0.00962
MA0117.1	MA0117.1	0.624
MA0119.1	MA0119.1	0.00269
MA0122.1	MA0122.1	0.779
MA0124.1	MA0124.1	0.343
MA0125.1	MA0125.1	0.127
MA0131.1	MA0131.1	0.371
MA0135.1	MA0135.1	0.904
MA0136.1	MA0136.1	9.28575e-10
MA0137.2	MA0137.2	0.185
MA0138.2	MA0138.2	0.897
MA0139.1	MA0139.1	0.782
MA0140.1	MA0140.1	0.174
MA0141.1	MA0141.1	0.388
MA0142.1	MA0142.1	1.03788e-12
MA0143.1	MA0143.1	7.21618e-5
MA0144.1	MA0144.1	0.041
MA0145.1	MA0145.1	0.173
MA0146.1	MA0146.1	0.192
MA0147.1	MA0147.1	0.86
MA0148.1	MA0148.1	0.0242
MA0149.1	MA0149.1	0.19
MA0150.1	MA0150.1	9.18099e-4
MA0152.1	MA0152.1	0.687
MA0153.1	MA0153.1	0.398
MA0154.1	MA0154.1	0.016
MA0155.1	MA0155.1	0.967
MA0156.1	MA0156.1	1.38535e-4
MA0157.1	MA0157.1	0.168
MA0159.1	MA0159.1	0.0904
MA0160.1	MA0160.1	0.218
MA0162.1	MA0162.1	0.914
MA0163.1	MA0163.1	6.14518e-4
MA0164.1	MA0164.1	0.827
MA0258.1	MA0258.1	0.0288
MA0259.1	MA0259.1	0.899

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13826

Novel motif	Logo	P-value
1	1	0.135
10	10	0.143
100	100	0.63
101	101	0.682
102	102	0.66
103	103	0.0581
104	104	0.643
105	105	0.171
106	106	0.0485
107	107	0.335
108	108	0.94
109	109	0.288
11	11	0.19
110	110	0.212
111	111	0.0675
112	112	0.25
113	113	0.122
114	114	0.0435
115	115	0.209
116	116	0.731
117	117	0.322
118	118	0.51
119	119	0.216
12	12	0.977
120	120	0.863
121	121	0.675
122	122	0.789
123	123	0.856
124	124	0.232
125	125	0.656
126	126	0.413
127	127	0.303
128	128	0.34
129	129	0.217
13	13	0.768
130	130	0.628
131	131	0.72
132	132	0.929
133	133	0.0478
134	134	0.425
135	135	0.00142
136	136	0.0767
137	137	0.466
138	138	0.18
139	139	0.0187
14	14	0.661
140	140	0.0261
141	141	0.328
142	142	0.334
143	143	0.00462
144	144	0.609
145	145	0.62
146	146	0.457
147	147	0.679
148	148	0.0381
149	149	0.0153
15	15	0.0885
150	150	0.675
151	151	0.0885
152	152	0.69
153	153	0.151
154	154	0.56
155	155	0.949
156	156	0.387
157	157	0.556
158	158	0.164
159	159	0.221
16	16	0.392
160	160	0.447
161	161	0.666
162	162	0.349
163	163	0.428
164	164	0.335
165	165	0.415
166	166	0.871
167	167	0.147
168	168	0.19
169	169	7.60522e-4
17	17	0.172
18	18	0.134
19	19	0.138
2	2	0.416
20	20	0.904
21	21	0.746
22	22	0.109
23	23	0.0116
24	24	0.765
25	25	0.439
26	26	0.587
27	27	0.272
28	28	0.911
29	29	0.547
3	3	0.157
30	30	0.851
31	31	0.716
32	32	0.0922
33	33	0.954
34	34	0.509
35	35	0.23
36	36	0.506
37	37	0.225
38	38	0.261
39	39	0.804
4	4	0.552
40	40	0.909
41	41	0.0909
42	42	0.323
43	43	0.0988
44	44	0.931
45	45	0.386
46	46	0.0605
47	47	0.884
48	48	0.758
49	49	0.0887
5	5	0.08
50	50	0.928
51	51	0.401
52	52	0.368
53	53	0.453
54	54	0.32
55	55	0.0478
56	56	0.579
57	57	0.534
58	58	0.0608
59	59	0.161
6	6	0.879
60	60	0.0563
61	61	0.953
62	62	0.0176
63	63	0.178
64	64	0.467
65	65	0.0537
66	66	0.529
67	67	0.334
68	68	0.935
69	69	0.827
7	7	0.354
70	70	0.0141
71	71	0.0881
72	72	0.445
73	73	0.301
74	74	0.357
75	75	0.205
76	76	0.582
77	77	0.22
78	78	0.568
79	79	0.151
8	8	0.137
80	80	0.06
81	81	0.331
82	82	0.124
83	83	0.654
84	84	0.522
85	85	0.036
86	86	0.601
87	87	0.0923
88	88	0.756
89	89	0.0763
9	9	0.102
90	90	0.325
91	91	0.18
92	92	0.031
93	93	0.123
94	94	0.0817
95	95	0.961
96	96	0.0322
97	97	0.566
98	98	0.169
99	99	0.626

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13826

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
FF:0000210 human sample
FF:0200003 iPS differentiation to neuron, control sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)

FF: FANTOM5
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0200005 (iPS differentiation to neuron sample)
0200003 (iPS differentiation to neuron, control sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr20:31350184..31350200,+!p1@DNMT3B!2.76!1166.33!DNMT3B;;chr8:73921136..73921151,+!p2@TERF1!2.28!276.59!TERF1;;chr3:181429704..181429722,+!p1@SOX2!2.15!139.88!SOX2;;chr4:188916918..188916942,+!p1@ZFP42!2.10!124.34!ZFP42;;chr8:128428066..128428078,+!p1@POU5F1B!2.07!117.73!POU5F1B;;chr8:145701192..145701241,-!p1@FOXH1!2.01!100.27!FOXH1;;chr6:31138439..31138475,-!p1@POU5F1!2.00!99.58!POU5F1;;chr14:57272369..57272391,-!p2@OTX2!1.81!64.09!OTX2;;chr16:3149278..3149305,-!p1@ZSCAN10!1.80!61.89!ZSCAN10;;chr8:70983476..70983493,-!p1@PRDM14!1.78!59.55!PRDM14;;chr1:164528687..164528711,+!p6@PBX1!1.77!67.26!PBX1;;chr13:100623375..100623425,-!p1@ZIC5!1.72!51.71!ZIC5;;chr9:114287433..114287513,+!p1@ZNF483!1.69!120.07!ZNF483;;chr3:57234000..57234014,-!p1@HESX1!1.68!47.04!HESX1;;chr1:6304233..6304243,+!p1@HES3!1.68!46.76!HES3;;chrX:136648279..136648295,+!p1@ZIC3!1.64!43.05!ZIC3;;chr12:7941989..7942014,+!p1@NANOG!1.64!42.77!NANOG;;chrX:139587228..139587234,-!p1@SOX3!1.57!35.90!SOX3;;chr14:22005197..22005261,-!p3@SALL2!1.56!35.35!SALL2;;chr20:50418972..50419029,-!p1@SALL4!1.56!35.07!SALL4;;chr2:16080659..16080685,+!p1@MYCN!1.54!33.83!MYCN;;chr3:170076314..170076334,+!p2@SKIL!1.50!40.02!SKIL;;chr13:100634031..100634045,+!p1@ZIC2!1.48!29.30!ZIC2;;chr2:5832508..5832524,+!p1@SOX11!1.48!29.02!SOX11;;chr17:7493405..7493419,-!p1@SOX15!1.46!27.78!SOX15;;chr1:63788229..63788250,+!p1@FOXD3!1.44!26.27!FOXD3;;chr2:16081912..16081931,+!p2@MYCN!1.43!25.72!MYCN;;chr11:63684602..63684664,-!p1@RCOR2!1.42!49.24!RCOR2;;chr20:50419055..50419066,-!p3@SALL4!1.42!25.31!SALL4;;chr4:299227..299272,-!p1@ZNF732!1.40!24.34!ZNF732;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.37!22.42!ZBED1;;chr10:70320074..70320106,+!p1@TET1!1.36!43.05!TET1;;chr2:25475094..25475112,-!p3@DNMT3A!1.34!20.77!DNMT3A;;chr9:77112244..77112262,+!p1@RORB!1.33!22.83!RORB;;chr3:181429741..181429767,+!p2@SOX2!1.32!20.08!SOX2;;chr2:25475120..25475176,-!p2@DNMT3A!1.31!25.99!DNMT3A;;chr17:47892398..47892407,+!p2@KAT7!1.31!19.53!KAT7;;chr18:56530136..56530199,+!p3@ZNF532!1.30!28.20!ZNF532;;chr3:71355163..71355209,-!p5@FOXP1!1.30!25.99!FOXP1;;chr7:26191809..26191890,+!p1@NFE2L3!1.29!89.40!NFE2L3;;chr6:15246200..15246214,+!p2@JARID2!1.29!49.93!JARID2;;chr8:102504651..102504683,+!p1@GRHL2!1.28!18.16!GRHL2;;chr19:20188776..20188826,+!p1@ZNF90!1.27!46.76!ZNF90;;chr9:127533519..127533573,-!p2@NR6A1!1.26!20.49!NR6A1;;chr13:100638100..100638115,+!p4@ZIC2!1.26!17.05!ZIC2;;chr12:7942020..7942031,+!p2@NANOG!1.25!16.64!NANOG;;chr15:57511609..57511651,+!p2@TCF12!1.22!26.13!TCF12;;chr3:48282587..48282603,+!p1@ZNF589!1.21!66.84!ZNF589;;chr8:40755333..40755352,-!p1@ZMAT4!1.21!15.27!ZMAT4;;chr19:12163769..12163798,-!p1@ZNF878!1.20!19.12!ZNF878;;chr19:20011775..20011800,+!p2@ZNF93!1.18!25.44!ZNF93;;chr19:23299814..23299844,+!p1@ZNF730!1.18!17.19!ZNF730;;chr17:41623692..41623715,-!p1@ETV4!1.17!57.90!ETV4;;chr8:73921067..73921078,+!p3@TERF1!1.17!21.87!TERF1;;chr10:48355030..48355090,+!p1@ZNF488!1.16!17.47!ZNF488;;chr10:126138597..126138612,-!p1@NKX1-2!1.16!13.62!NKX1-2;;chr14:69263043..69263069,-!p8@ZFP36L1!1.16!13.62!ZFP36L1;;chr8:145701166..145701187,-!p2@FOXH1!1.16!13.62!FOXH1;;chr8:70983506..70983522,-!p3@PRDM14!1.16!13.48!PRDM14;;chr19:9609272..9609297,-!p1@ZNF560!1.15!13.20!ZNF560;;chr19:46800289..46800327,+!p2@HIF3A!1.15!13.07!HIF3A;;chr20:50418128..50418147,-!p2@SALL4!1.15!13.07!SALL4;;chr14:21994337..21994442,-!p1@SALL2!1.14!35.35!SALL2;;chr17:41622765..41622821,-!p2@ETV4!1.14!19.67!ETV4;;chr1:201979703..201979721,+!p2@ELF3!1.14!12.65!ELF3;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.13!26.96!SOHLH2;;chr11:128457446..128457461,-!p4@ETS1!1.13!12.38!ETS1;;chr13:100634004..100634025,+!p2@ZIC2!1.13!12.38!ZIC2;;chr2:60780753..60780800,-!p1@BCL11A!1.12!59.97!BCL11A;;chr19:23433144..23433204,-!p1@ZNF724P!1.12!54.33!ZNF724P;;chrX:136648297..136648319,+!p3@ZIC3!1.12!12.24!ZIC3;;chr2:16082155..16082169,+!p3@MYCN!1.11!11.97!MYCN;;chr8:70983443..70983460,-!p2@PRDM14!1.11!11.97!PRDM14;;chr12:3068544..3068597,+!p1@TEAD4!1.09!67.81!TEAD4;;chr2:60780607..60780624,-!p2@BCL11A!1.09!34.52!BCL11A;;chr19:50922187..50922204,+!p1@SPIB!1.09!11.28!SPIB;;chr20:31368212..31368235,+!p2@DNMT3B!1.09!11.28!DNMT3B;;chr14:22005018..22005040,-!p6@SALL2!1.09!11.28!SALL2;;chr18:56531584..56531646,+!p4@ZNF532!1.08!14.72!ZNF532;;chr6:34204672..34204692,+!p1@HMGA1!1.05!1151.34!HMGA1;;chr19:23299851..23299880,+!p2@ZNF730!1.05!10.32!ZNF730;;chr19:20959098..20959117,+!p1@ZNF66P!1.04!41.67!ZNF66P;;chrX:136648643..136648711,+!p2@ZIC3!1.04!9.90!ZIC3;;chr14:21994449..21994524,-!p2@SALL2!1.03!29.71!SALL2;;chr19:12203100..12203132,+!p1@ZNF788!1.03!19.94!ZNF788;;chr15:74833584..74833626,+!p1@ARID3B!1.02!22.28!ARID3B;;chr5:124084493..124084524,-!p2@ZNF608!1.02!21.59!ZNF608;;chr14:22005343..22005364,-!p5@SALL2!1.02!9.35!SALL2;;chr7:64254834..64254854,+!p2@ZNF138!1.01!16.92!ZNF138;;chr19:58341656..58341694,+!p5@ZNF587!1.01!11.14!ZNF587;;chr19:46367576..46367592,+!p1@FOXA3!1.01!9.22!FOXA3;;chr6:21597765..21597779,+!p2@SOX4!1.00!73.72!SOX4;;chr2:85360499..85360598,+!p1@TCF7L1!1.00!51.99!TCF7L1;;chr6:126070769..126070801,+!p1@HEY2!1.00!10.45!HEY2;;chr16:30406423..30406447,+!p4@ZNF48!1.00!9.08!ZNF48;;chr16:29818199..29818216,+!p11@MAZ!0.99!14.58!MAZ;;chr7:14028743..14028799,-!p3@ETV1!0.99!11.14!ETV1;;chr2:5832493..5832507,+!p2@SOX11!0.99!8.66!SOX11;;chr19:47523058..47523114,+!p1@NPAS1!0.99!8.66!NPAS1;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.98!12.52!TGIF2;;chr12:66218836..66218888,+!p1@HMGA2!0.97!80.60!HMGA2;;chr19:925727..925784,+!p3@ARID3A!0.97!18.29!ARID3A;;chr11:6947720..6947812,+!p1@ZNF215!0.97!11.00!ZNF215;;chr15:85144307..85144329,+!p2@ZSCAN2!0.97!9.49!ZSCAN2;;chr19:20011744..20011770,+!p1@ZNF93!0.95!31.36!ZNF93;;chr19:19976714..19976729,+!p3@ZNF253!0.95!15.27!ZNF253;;chr17:46132044..46132080,+!p4@NFE2L1!0.95!7.98!NFE2L1;;chr1:201979743..201979762,+!p1@ELF3!0.95!7.84!ELF3;;chr2:88752207..88752218,-!p1@FOXI3!0.95!7.84!FOXI3;;chr6:20402102..20402152,+!p1@E2F3!0.93!32.18!E2F3;;chr6:21593973..21593988,+!p1@SOX4!0.92!271.50!SOX4;;chr4:26322267..26322334,+!p3@RBPJ!0.92!18.29!RBPJ;;chr13:41240737..41240787,-!p1@FOXO1!0.91!88.85!FOXO1;;chr3:48282536..48282586,+!p2@ZNF589!0.91!20.08!ZNF589;;chr19:21265028..21265052,+!p2@ZNF714!0.91!13.07!ZNF714;;chr19:21264991..21265026,+!p1@ZNF714!0.90!48.14!ZNF714;;chr12:66218183..66218209,+!p4@HMGA2!0.90!13.62!HMGA2;;chr19:58400344..58400364,-!p2@ZNF814!0.90!10.18!ZNF814;;chr12:7079780..7079791,-!p2@PHB2!0.88!36.17!PHB2;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.88!26.55!HNRPK;;chr6:15246217..15246228,+!p3@JARID2!0.88!12.10!JARID2;;chr12:66218378..66218401,+!p6@HMGA2!0.88!10.59!HMGA2;;chr3:33482052..33482116,-!p2@UBP1!0.88!10.32!UBP1;;chr10:135043702..135043729,+!p1@UTF1!0.88!6.60!UTF1;;chr12:7941942..7941949,+!p3@NANOG!0.88!6.60!NANOG;;chr13:100623360..100623373,-!p2@ZIC5!0.88!6.60!ZIC5;;chr6:15246261..15246312,+!p1@JARID2!0.87!165.32!JARID2;;chr2:42795745..42795824,+!p1@MTA3!0.87!62.99!MTA3;;chr19:22034809..22034878,-!p2@ZNF43!0.87!23.52!ZNF43;;chr19:24097706..24097731,+!p2@ZNF726!0.87!12.79!ZNF726;;chr1:38512457..38512474,-!p1@POU3F1!0.87!7.15!POU3F1;;chr20:42295713..42295738,+!p2@MYBL2!0.86!38.65!MYBL2;;chr19:54024313..54024361,+!p7@ZNF331!0.86!6.33!ZNF331;;chr1:247171316..247171336,-!p3@ZNF695!0.85!9.22!ZNF695;;chr2:166326200..166326216,+!p1@CSRNP3!0.85!9.22!CSRNP3;;chr6:21597514..21597578,+!p4@SOX4!0.84!10.32!SOX4;;chr3:32023232..32023273,+!p1@ZNF860!0.84!8.66!ZNF860;;chr3:141747441..141747452,-!p4@TFDP2!0.84!8.39!TFDP2;;chr5:138609782..138609826,+!p5@MATR3!0.83!40.44!MATR3;;chr7:64363638..64363667,+!p1@ZNF273!0.83!30.95!ZNF273;;chr7:64126535..64126559,+!p2@ZNF107!0.83!12.79!ZNF107;;chr1:247171347..247171366,-!p2@ZNF695!0.83!11.00!ZNF695;;chr17:41622925..41622976,-!p3@ETV4!0.83!8.80!ETV4;;chr14:90085820..90085840,-!p6@FOXN3!0.83!5.78!FOXN3;;chr19:9695169..9695188,-!p1@ZNF121!0.82!107.14!ZNF121;;chr10:114710098..114710130,+!p2@TCF7L2!0.82!45.39!TCF7L2;;chr19:58400372..58400411,-!p1@ZNF814!0.82!31.50!ZNF814;;chr6:21597600..21597664,+!p3@SOX4!0.82!9.63!SOX4;;chr9:127533582..127533615,-!p1@NR6A1!0.82!8.66!NR6A1;;chr1:204042233..204042249,+!p1@SOX13!0.81!37.14!SOX13;;chr19:19976683..19976709,+!p1@ZNF253!0.81!25.58!ZNF253;;chr8:86089627..86089653,+!p3@E2F5!0.81!6.19!E2F5;;chr9:77112225..77112238,+!p2@RORB!0.81!5.50!RORB;;chr16:29818160..29818188,+!p6@MAZ!0.80!27.10!MAZ;;chr10:114710218..114710229,+!p4@TCF7L2!0.80!11.00!TCF7L2;;chr19:20150268..20150298,-!p2@ZNF682!0.80!10.45!ZNF682;;chrX:84499081..84499115,+!p2@ZNF711!0.80!8.11!ZNF711;;chr1:209979467..209979494,-!p1@IRF6!0.80!6.05!IRF6;;chr14:22005062..22005082,-!p7@SALL2!0.80!5.36!SALL2;;chr7:64838786..64838809,+!p2@ZNF92!0.79!31.91!ZNF92;;chr17:41622731..41622764,-!p5@ETV4!0.79!5.23!ETV4;;chr2:16080635..16080650,+!p4@MYCN!0.79!5.23!MYCN;;chr3:141747459..141747475,-!p1@TFDP2!0.78!46.08!TFDP2;;chr2:239148671..239148686,-!p1@HES6!0.78!19.81!HES6;;chr17:41623009..41623053,-!p4@ETV4!0.78!8.53!ETV4;;chr18:53254566..53254567,-!p8@TCF4!0.78!8.53!TCF4;;chr17:7197911..7197964,-!p1@YBX2!0.78!5.09!YBX2;;chr20:42295745..42295765,+!p1@MYBL2!0.77!88.71!MYBL2;;chr12:66358080..66358094,+!p15@HMGA2!0.77!4.95!HMGA2;;chr12:19592405..19592492,+!p2@AEBP2!0.76!44.43!AEBP2;;chr19:52408227..52408243,-!p2@ZNF649!0.76!11.42!ZNF649;;chr19:48774586..48774670,+!p1@ZNF114!0.76!6.05!ZNF114;;chr3:170076223..170076242,+!p6@SKIL!0.76!5.50!SKIL;;chr1:202777535..202777556,-!p1@KDM5B!0.75!172.47!KDM5B;;chr19:19779619..19779670,+!p1@ZNF101!0.75!14.17!ZNF101;;chr12:3068501..3068515,+!p4@TEAD4!0.75!8.39!TEAD4;;chr1:151032922..151032951,+!p2@MLLT11!0.75!8.11!MLLT11;;chr1:91487013..91487070,-!p6@ZNF644!0.75!6.74!ZNF644;;chr19:49864746..49864780,-!p2@TEAD2!0.75!6.60!TEAD2;;chr8:102504690..102504704,+!p3@GRHL2!0.75!4.68!GRHL2;;chr13:41240717..41240735,-!p2@FOXO1!0.74!33.97!FOXO1;;chr19:53758058..53758088,-!p2@ZNF677!0.74!16.37!ZNF677;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.74!13.89!ZNF525;;chr2:121493425..121493474,+!p1@GLI2!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92580,+!p2@SLC30A9!0.28!5.50!SLC30A9;;chr8:28748099..28748141,+!p2@HMBOX1!0.28!4.68!HMBOX1;;chr19:52408285..52408310,-!p3@ZNF649!0.28!3.30!ZNF649;;chr1:35656397..35656455,-!p3@SFPQ!0.28!3.30!SFPQ;;chr6:91006518..91006570,-!p1@BACH2!0.28!3.16!BACH2;;chr19:11708311..11708332,+!p2@ZNF627!0.28!2.48!ZNF627;;chr4:87857433..87857472,+!p9@AFF1!0.28!2.34!AFF1;;chr5:172484377..172484418,+!p2@C5orf41!0.28!2.06!CREBRF;;chr14:105886300..105886316,+!p2@MTA1!0.28!1.93!MTA1;;chr1:247242107..247242120,-!p2@ZNF670!0.28!1.93!ZNF670;;chr12:133706975..133707013,-!p3@ZNF891!0.28!1.51!ZNF891;;chr19:57078830..57078848,+!p4@ZNF470!0.28!1.38!ZNF470;;chr1:91487352..91487376,-!p9@ZNF644!0.28!1.38!ZNF644;;chr19:31840438..31840470,-!p3@TSHZ3!0.28!1.38!TSHZ3;;chr14:89878472..89878496,-!p7@FOXN3!0.28!1.24!FOXN3;;chr19:24216327..24216345,+!p5@ZNF254!0.28!1.24!ZNF254;;chr1:149858461..149858479,+!p1@BOLA1!0.27!660.74!BOLA1;;chr1:212782094..212782109,+!p1@ATF3!0.27!45.66!ATF3;;chr19:56632592..56632670,-!p1@ZNF787!0.27!37.69!ZNF787;;chr4:26322419..26322479,+!p2@RBPJ!0.27!19.81!RBPJ;;chr1:202777592..202777616,-!p2@KDM5B!0.27!17.88!KDM5B;;chr19:53935221..53935258,+!p1@ZNF761!0.27!16.50!ZNF761;;chr6:44233252..44233296,-!p1@NFKBIE!0.27!15.95!NFKBIE;;chr3:44690211..44690267,+!p1@ZNF35!0.27!14.03!ZNF35;;chr19:9434841..9434886,+!p1@ZNF559!0.27!7.98!ZNF559;;chr19:33793430..33793447,-!p1@CEBPA!0.27!6.33!CEBPA;;chr8:57123815..57123867,-!p1@PLAG1!0.27!6.19!PLAG1;;chr8:144373550..144373617,+!p1@ZNF696!0.27!5.36!ZNF696;;chrX:101186981..101187030,-!p1@ZMAT1!0.27!4.81!ZMAT1;;chr19:19516507..19516539,+!p7@GATAD2A!0.27!4.26!GATAD2A;;chr12:122516626..122516645,+!p2@MLXIP!0.27!3.99!MLXIP;;chr2:42795651..42795676,+!p3@MTA3!0.27!3.71!MTA3;;chr6:20403727..20403769,+!p4@E2F3!0.27!3.30!E2F3;;chr7:86781778..86781789,+!p4@DMTF1!0.27!2.61!DMTF1;;chr11:7041554..7041602,-!p1@ZNF214!0.27!2.48!ZNF214;;chr3:185826814..185826825,-!p3@ETV5!0.27!2.34!ETV5;;chr20:32274150..32274166,-!p2@E2F1!0.27!2.34!E2F1;;chr6:170863498..170863514,+!p3@TBP!0.27!2.20!TBP;;chr13:45151509..45151539,-!p6@TSC22D1!0.27!2.06!TSC22D1;;chrX:76937934..76937974,-!p3@ATRX!0.27!1.79!ATRX;;chr1:247095286..247095297,-!p4@AHCTF1!0.27!1.51!AHCTF1;;chr14:89878529..89878559,-!p5@FOXN3!0.27!1.51!FOXN3;;chr12:46123519..46123529,+!p4@ARID2!0.27!1.38!ARID2;;chr10:44144187..44144201,-!p3@ZNF32!0.27!1.24!ZNF32;;chr8:28748157..28748175,+!p3@HMBOX1!0.27!1.24!HMBOX1;;chr4:83821967..83821998,+!p3@THAP9!0.27!1.24!THAP9;;chr19:23578226..23578285,-!p1@ZNF91!0.26!27.51!ZNF91;;chr1:27022485..27022543,+!p1@ARID1A!0.26!22.56!ARID1A;;chr1:246729544..246729572,-!p1@TFB2M!0.26!15.40!TFB2M;;chr19:58090240..58090289,-!p1@ZNF416!0.26!7.43!ZNF416;;chr6:20403826..20403886,+!p2@E2F3!0.26!7.43!E2F3;;chr19:58662139..58662182,-!p1@ZNF329!0.26!7.15!ZNF329;;chr10:43134001..43134026,-!p1@ZNF33B!0.26!6.74!ZNF33B;;chr9:32552552..32552576,-!p2@TOPORS!0.26!5.50!TOPORS;;chr19:56092252..56092287,-!p2@ZNF579!0.26!3.85!ZNF579;;chr1:78444714..78444725,-!p3@FUBP1!0.26!3.71!FUBP1;;chr1:8877735..8877760,-!p8@RERE!0.26!3.71!RERE;;chr3:44754126..44754171,+!p1@ZNF502!0.26!3.30!ZNF502;;chr16:31085058..31085078,-!p2@ZNF668!0.26!2.61!ZNF668;;chr1:151253991..151254031,+!p2@ZNF687!0.26!2.34!ZNF687;;chr20:52210368..52210384,-!p1@ZNF217!0.26!2.34!ZNF217;;chr11:85376097..85376108,-!p2@CREBZF!0.26!2.34!CREBZF;;chr19:57078854..57078889,+!p1@ZNF470!0.26!1.79!ZNF470;;chr17:20492136..20492165,+!p1@MEIS3P2!0.26!1.79!MEIS3P2;;chr18:77867177..77867197,+!p3@ADNP2!0.26!1.65!ADNP2;;chr18:3448390..3448411,+!p14@TGIF1!0.26!1.38!TGIF1;;chr1:151377005..151377009,-!p6@POGZ!0.26!1.38!POGZ;;chr20:306221..306232,+!p4@SOX12!0.26!1.38!SOX12;;chr1:43148716..43148756,+!p6@YBX1!0.26!1.24!YBX1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.26!1.24!L3MBTL4;;chr17:41623259..41623278,-!p7@ETV4!0.26!1.10!ETV4;;chr19:37329598..37329605,-!p4@ZNF790!0.26!1.10!ZNF790;;
+|ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:13433-144E4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 23:52, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0