FFCP PHASE1:Mm9::chr11:66771424..66771439,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:66771424..66771439,+ | |id=chr11:66771424..66771439,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.02e-21!9;CL:0002251!1.02e-21!9;CL:0000239!6.71e-16!6;CL:0000677!6.71e-16!6;CL:0000212!6.71e-16!6;CL:0000584!6.71e-16!6;CL:0000075!1.62e-13!7;CL:0000066!1.52e-12!25;CL:0002076!2.45e-12!15;CL:0000473!7.74e-09!3;CL:0000627!7.74e-09!3;CL:0000682!7.74e-09!3;CL:0000223!7.91e-09!20;CL:0002250!2.00e-07!3 | |ontology_enrichment_celltype=CL:0002563!1.02e-21!9;CL:0002251!1.02e-21!9;CL:0000239!6.71e-16!6;CL:0000677!6.71e-16!6;CL:0000212!6.71e-16!6;CL:0000584!6.71e-16!6;CL:0000075!1.62e-13!7;CL:0000066!1.52e-12!25;CL:0002076!2.45e-12!15;CL:0000473!7.74e-09!3;CL:0000627!7.74e-09!3;CL:0000682!7.74e-09!3;CL:0000223!7.91e-09!20;CL:0002250!2.00e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.43e-22,6;CL:0000677,5.43e-22,6;CL:0000584,5.43e-22,6;CL:0002563,3.32e-19,9;CL:0002251,3.32e-19,9;CL:0000075,8.90e-19,7;CL:0000066,4.05e-13,25;CL:0000682,6.31e-12,3;CL:0002076,3.50e-11,15;CL:0000223,3.62e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.05e-36!15;UBERON:0001242!1.44e-31!13;UBERON:0000060!1.44e-31!13;UBERON:0001262!1.44e-31!13;UBERON:0004786!1.44e-31!13;UBERON:0000160!1.45e-28!43;UBERON:0005409!5.28e-25!59;UBERON:0003350!1.02e-21!9;UBERON:0004808!1.02e-21!9;UBERON:0001277!1.02e-21!9;UBERON:0004923!1.39e-21!24;UBERON:0000485!1.88e-17!11;UBERON:0001007!2.68e-11!128;UBERON:0001555!2.68e-11!128;UBERON:0007026!2.68e-11!128;UBERON:0004119!5.05e-11!130;UBERON:0000925!5.05e-11!130;UBERON:0006595!5.05e-11!130;UBERON:0004921!2.18e-09!126;UBERON:0004185!2.18e-09!126;UBERON:0000331!4.81e-09!3;UBERON:0002116!4.81e-09!3;UBERON:0001204!4.81e-09!3;UBERON:0001168!4.81e-09!3 | |ontology_enrichment_uberon=UBERON:0000344!1.05e-36!15;UBERON:0001242!1.44e-31!13;UBERON:0000060!1.44e-31!13;UBERON:0001262!1.44e-31!13;UBERON:0004786!1.44e-31!13;UBERON:0000160!1.45e-28!43;UBERON:0005409!5.28e-25!59;UBERON:0003350!1.02e-21!9;UBERON:0004808!1.02e-21!9;UBERON:0001277!1.02e-21!9;UBERON:0004923!1.39e-21!24;UBERON:0000485!1.88e-17!11;UBERON:0001007!2.68e-11!128;UBERON:0001555!2.68e-11!128;UBERON:0007026!2.68e-11!128;UBERON:0004119!5.05e-11!130;UBERON:0000925!5.05e-11!130;UBERON:0006595!5.05e-11!130;UBERON:0004921!2.18e-09!126;UBERON:0004185!2.18e-09!126;UBERON:0000331!4.81e-09!3;UBERON:0002116!4.81e-09!3;UBERON:0001204!4.81e-09!3;UBERON:0001168!4.81e-09!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.00e-39,15;UBERON:0000160,2.44e-38,31;UBERON:0001242,1.25e-32,13;UBERON:0001262,1.25e-32,13;UBERON:0004786,1.25e-32,13;UBERON:0005409,8.11e-27,47;UBERON:0004923,6.38e-24,24;UBERON:0003350,3.32e-19,9;UBERON:0004808,3.32e-19,9;UBERON:0001277,3.32e-19,9;UBERON:0000485,1.46e-15,11;UBERON:0002108,3.43e-15,4;UBERON:0000331,3.21e-12,3;UBERON:0002116,3.21e-12,3;UBERON:0001204,3.21e-12,3;UBERON:0001168,3.21e-12,3;UBERON:0001007,3.31e-11,116;UBERON:0001555,3.31e-11,116;UBERON:0007026,3.31e-11,116;UBERON:0004119,5.99e-11,118;UBERON:0000925,5.99e-11,118;UBERON:0006595,5.99e-11,118;UBERON:0004921,6.78e-09,114;UBERON:0001962,9.86e-09,2;UBERON:0001961,9.86e-09,2;UBERON:0001744,9.86e-09,2;UBERON:0001155,3.21e-08,2;UBERON:0000059,3.21e-08,2 | |||
|phase1_expression=0,12.9120900826564,10.4649825059593,3.62957053568196,6.51164448930251,3.86122325397347,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,8.02932483735095,7.46501553349526,6.03066794622705,4.09395342103189,10.8313349090133,7.30887376303799,5.98672378769323,0,0,0,1.44425809875637,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.17340679996253,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0,0.198956472041151,0.19496408711912,2.69645822596266,3.02593269824572,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,12.9120900826564,10.4649825059593,3.62957053568196,6.51164448930251,3.86122325397347,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,8.02932483735095,7.46501553349526,6.03066794622705,4.09395342103189,10.8313349090133,7.30887376303799,5.98672378769323,0,0,0,1.44425809875637,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.17340679996253,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0,0.198956472041151,0.19496408711912,2.69645822596266,3.02593269824572,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENSMUST00000127166 | |short_description=p3@ENSMUST00000127166 | ||
}} | }} |
Revision as of 02:14, 14 November 2012
Short description: | p3@ENSMUST00000127166 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000127166_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 28bp_to_ENSMUST00000127166_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.43e-22 | 6 |
gut absorptive cell | 5.43e-22 | 6 |
enterocyte | 5.43e-22 | 6 |
intestinal epithelial cell | 3.32e-19 | 9 |
epithelial cell of alimentary canal | 3.32e-19 | 9 |
columnar/cuboidal epithelial cell | 8.90e-19 | 7 |
epithelial cell | 4.05e-13 | 25 |
M cell of gut | 6.31e-12 | 3 |
endo-epithelial cell | 3.50e-11 | 15 |
endodermal cell | 3.62e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.00e-39 | 15 |
intestine | 2.44e-38 | 31 |
intestinal mucosa | 1.25e-32 | 13 |
wall of intestine | 1.25e-32 | 13 |
gastrointestinal system mucosa | 1.25e-32 | 13 |
gastrointestinal system | 8.11e-27 | 47 |
organ component layer | 6.38e-24 | 24 |
epithelium of mucosa | 3.32e-19 | 9 |
gastrointestinal system epithelium | 3.32e-19 | 9 |
intestinal epithelium | 3.32e-19 | 9 |
simple columnar epithelium | 1.46e-15 | 11 |
small intestine | 3.43e-15 | 4 |
ileal mucosa | 3.21e-12 | 3 |
ileum | 3.21e-12 | 3 |
mucosa of small intestine | 3.21e-12 | 3 |
wall of small intestine | 3.21e-12 | 3 |
digestive system | 3.31e-11 | 116 |
digestive tract | 3.31e-11 | 116 |
primitive gut | 3.31e-11 | 116 |
endoderm-derived structure | 5.99e-11 | 118 |
endoderm | 5.99e-11 | 118 |
presumptive endoderm | 5.99e-11 | 118 |
subdivision of digestive tract | 6.78e-09 | 114 |
gut-associated lymphoid tissue | 9.86e-09 | 2 |
mucosa-associated lymphoid tissue | 9.86e-09 | 2 |
lymphoid tissue | 9.86e-09 | 2 |
colon | 3.21e-08 | 2 |
large intestine | 3.21e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.