FFCP PHASE1:Mm9::chr7:52272650..52272661,-: Difference between revisions
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|id=chr7:52272650..52272661,- | |id=chr7:52272650..52272661,- | ||
|ontology_enrichment_celltype=CL:0000066!8.60e-09!25;CL:0002563!2.41e-07!9;CL:0002251!2.41e-07!9;CL:0002076!6.74e-07!15 | |ontology_enrichment_celltype=CL:0000066!8.60e-09!25;CL:0002563!2.41e-07!9;CL:0002251!2.41e-07!9;CL:0002076!6.74e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.39e-25,9;CL:0002251,3.39e-25,9;CL:0002076,3.10e-20,15;CL:0002250,3.45e-20,3;CL:0000223,9.40e-20,20;CL:0000066,1.12e-19,25;CL:0002321,9.28e-12,70;CL:0000239,5.87e-10,6;CL:0000677,5.87e-10,6;CL:0000584,5.87e-10,6;CL:0000215,1.63e-09,3;CL:0002494,1.79e-09,3;CL:0000737,1.79e-09,3;CL:0000746,1.79e-09,3;CL:0000513,1.79e-09,3;CL:0000222,5.89e-09,7;CL:0000075,1.30e-08,7;CL:0000213,4.65e-08,1;CL:0002078,4.65e-08,1;CL:0000115,4.65e-08,1;CL:0002262,4.65e-08,1;CL:1000398,4.65e-08,1;CL:0002374,2.74e-07,1;CL:0000202,2.74e-07,1;CL:0000199,2.74e-07,1;CL:0000855,2.74e-07,1;CL:0000589,2.74e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!3.93e-09!11;UBERON:0003350!2.41e-07!9;UBERON:0004808!2.41e-07!9;UBERON:0001277!2.41e-07!9 | |ontology_enrichment_uberon=UBERON:0000485!3.93e-09!11;UBERON:0003350!2.41e-07!9;UBERON:0004808!2.41e-07!9;UBERON:0001277!2.41e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.39e-27,11;UBERON:0003350,3.39e-25,9;UBERON:0004808,3.39e-25,9;UBERON:0001277,3.39e-25,9;UBERON:0001242,2.21e-17,13;UBERON:0001262,2.21e-17,13;UBERON:0004786,2.21e-17,13;UBERON:0000344,4.97e-15,15;UBERON:0004923,2.80e-09,24;UBERON:0000490,1.44e-08,66;UBERON:0002394,4.65e-08,1;UBERON:0001281,4.65e-08,1;UBERON:0000353,4.65e-08,1;UBERON:0003497,4.65e-08,1;UBERON:0003909,4.65e-08,1;UBERON:0003928,4.65e-08,1;UBERON:0003835,4.65e-08,1;UBERON:0003513,4.65e-08,1;UBERON:0001280,4.65e-08,1;UBERON:0004647,4.65e-08,1;UBERON:0002294,4.65e-08,1;UBERON:0001173,4.65e-08,1;UBERON:0004912,4.65e-08,1;UBERON:0005171,4.65e-08,1;UBERON:0000160,4.21e-07,31 | |||
|phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0.60492842261366,0,2.18243053485457,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0,0,0,0,2.02196133825892,2.1610503896604,3.06254034393554,0,0,0,0,0,0,0.251793635951155,0.811015449756117,0.734187008646726,0,0,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0,2.0057340795713,2.06268836910977,0,0,0,2.03306719241479,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0.075726193333184,1.20914496170857,22.6094301187309,0,0.679971333707751,0,0,0,0,0.852151612890289,0.519572009205738,0.35333957451034,0.985903938436763,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0.540186184383045,0,0,0.154267112887378,0.232533944750408,0,0.467061369468678,0,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,1.14704320301017,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0.327869890753351,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0.60492842261366,0,2.18243053485457,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0,0,0,0,2.02196133825892,2.1610503896604,3.06254034393554,0,0,0,0,0,0,0.251793635951155,0.811015449756117,0.734187008646726,0,0,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0,2.0057340795713,2.06268836910977,0,0,0,2.03306719241479,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0.075726193333184,1.20914496170857,22.6094301187309,0,0.679971333707751,0,0,0,0,0.852151612890289,0.519572009205738,0.35333957451034,0.985903938436763,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0.540186184383045,0,0,0.154267112887378,0.232533944750408,0,0.467061369468678,0,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,1.14704320301017,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0.327869890753351,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr7:52272650..52272661,- | |short_description=p@chr7:52272650..52272661,- | ||
}} | }} |
Revision as of 15:19, 14 November 2012
Short description: | p@chr7:52272650..52272661, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52272650..52272661, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.39e-25 | 9 |
epithelial cell of alimentary canal | 3.39e-25 | 9 |
endo-epithelial cell | 3.10e-20 | 15 |
intestinal crypt stem cell | 3.45e-20 | 3 |
endodermal cell | 9.40e-20 | 20 |
epithelial cell | 1.12e-19 | 25 |
embryonic cell | 9.28e-12 | 70 |
brush border epithelial cell | 5.87e-10 | 6 |
gut absorptive cell | 5.87e-10 | 6 |
enterocyte | 5.87e-10 | 6 |
barrier cell | 1.63e-09 | 3 |
cardiocyte | 1.79e-09 | 3 |
striated muscle cell | 1.79e-09 | 3 |
cardiac muscle cell | 1.79e-09 | 3 |
cardiac muscle myoblast | 1.79e-09 | 3 |
mesodermal cell | 5.89e-09 | 7 |
columnar/cuboidal epithelial cell | 1.30e-08 | 7 |
lining cell | 4.65e-08 | 1 |
meso-epithelial cell | 4.65e-08 | 1 |
endothelial cell | 4.65e-08 | 1 |
endothelial cell of sinusoid | 4.65e-08 | 1 |
endothelial cell of hepatic sinusoid | 4.65e-08 | 1 |
ear hair cell | 2.74e-07 | 1 |
auditory hair cell | 2.74e-07 | 1 |
mechanoreceptor cell | 2.74e-07 | 1 |
sensory hair cell | 2.74e-07 | 1 |
cochlear inner hair cell | 2.74e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.39e-27 | 11 |
epithelium of mucosa | 3.39e-25 | 9 |
gastrointestinal system epithelium | 3.39e-25 | 9 |
intestinal epithelium | 3.39e-25 | 9 |
intestinal mucosa | 2.21e-17 | 13 |
wall of intestine | 2.21e-17 | 13 |
gastrointestinal system mucosa | 2.21e-17 | 13 |
mucosa | 4.97e-15 | 15 |
organ component layer | 2.80e-09 | 24 |
unilaminar epithelium | 1.44e-08 | 66 |
bile duct | 4.65e-08 | 1 |
hepatic sinusoid | 4.65e-08 | 1 |
parenchyma | 4.65e-08 | 1 |
abdomen blood vessel | 4.65e-08 | 1 |
sinusoid | 4.65e-08 | 1 |
digestive system duct | 4.65e-08 | 1 |
abdominal segment blood vessel | 4.65e-08 | 1 |
trunk blood vessel | 4.65e-08 | 1 |
liver parenchyma | 4.65e-08 | 1 |
liver lobule | 4.65e-08 | 1 |
biliary system | 4.65e-08 | 1 |
biliary tree | 4.65e-08 | 1 |
biliary bud | 4.65e-08 | 1 |
hepatic duct | 4.65e-08 | 1 |
intestine | 4.21e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.