FFCP PHASE1:Mm9::chr16:4037136..4037152,+: Difference between revisions
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|id=chr16:4037136..4037152,+ | |id=chr16:4037136..4037152,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.72e-16!9;CL:0002251!5.72e-16!9;CL:0000066!2.70e-15!25;CL:0000075!2.46e-13!7;CL:0000239!3.82e-12!6;CL:0000677!3.82e-12!6;CL:0000212!3.82e-12!6;CL:0000584!3.82e-12!6;CL:0000223!6.19e-09!20;CL:0002076!9.01e-09!15;CL:0000473!4.45e-07!3;CL:0000627!4.45e-07!3;CL:0000682!4.45e-07!3 | |ontology_enrichment_celltype=CL:0002563!5.72e-16!9;CL:0002251!5.72e-16!9;CL:0000066!2.70e-15!25;CL:0000075!2.46e-13!7;CL:0000239!3.82e-12!6;CL:0000677!3.82e-12!6;CL:0000212!3.82e-12!6;CL:0000584!3.82e-12!6;CL:0000223!6.19e-09!20;CL:0002076!9.01e-09!15;CL:0000473!4.45e-07!3;CL:0000627!4.45e-07!3;CL:0000682!4.45e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.24e-17,9;CL:0002251,3.24e-17,9;CL:0000239,5.31e-16,6;CL:0000677,5.31e-16,6;CL:0000584,5.31e-16,6;CL:0000075,1.33e-13,7;CL:0000066,1.86e-12,25;CL:0002076,9.06e-10,15;CL:0000682,4.27e-09,3;CL:0000223,1.20e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.17e-25!15;UBERON:0000160!5.69e-24!43;UBERON:0001242!3.15e-22!13;UBERON:0000060!3.15e-22!13;UBERON:0001262!3.15e-22!13;UBERON:0004786!3.15e-22!13;UBERON:0000485!2.64e-18!11;UBERON:0003350!5.72e-16!9;UBERON:0004808!5.72e-16!9;UBERON:0001277!5.72e-16!9;UBERON:0005409!1.73e-15!59;UBERON:0004923!1.76e-14!24;UBERON:0001007!1.69e-08!128;UBERON:0001555!1.69e-08!128;UBERON:0007026!1.69e-08!128;UBERON:0004119!3.09e-08!130;UBERON:0000925!3.09e-08!130;UBERON:0006595!3.09e-08!130;UBERON:0004921!3.57e-07!126;UBERON:0004185!3.57e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!1.17e-25!15;UBERON:0000160!5.69e-24!43;UBERON:0001242!3.15e-22!13;UBERON:0000060!3.15e-22!13;UBERON:0001262!3.15e-22!13;UBERON:0004786!3.15e-22!13;UBERON:0000485!2.64e-18!11;UBERON:0003350!5.72e-16!9;UBERON:0004808!5.72e-16!9;UBERON:0001277!5.72e-16!9;UBERON:0005409!1.73e-15!59;UBERON:0004923!1.76e-14!24;UBERON:0001007!1.69e-08!128;UBERON:0001555!1.69e-08!128;UBERON:0007026!1.69e-08!128;UBERON:0004119!3.09e-08!130;UBERON:0000925!3.09e-08!130;UBERON:0006595!3.09e-08!130;UBERON:0004921!3.57e-07!126;UBERON:0004185!3.57e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.97e-36,31;UBERON:0000344,2.40e-30,15;UBERON:0001242,1.05e-25,13;UBERON:0001262,1.05e-25,13;UBERON:0004786,1.05e-25,13;UBERON:0005409,3.17e-22,47;UBERON:0004923,9.46e-18,24;UBERON:0003350,3.24e-17,9;UBERON:0004808,3.24e-17,9;UBERON:0001277,3.24e-17,9;UBERON:0000485,7.87e-14,11;UBERON:0002108,7.41e-10,4;UBERON:0001007,1.71e-09,116;UBERON:0001555,1.71e-09,116;UBERON:0007026,1.71e-09,116;UBERON:0004119,3.11e-09,118;UBERON:0000925,3.11e-09,118;UBERON:0006595,3.11e-09,118;UBERON:0000331,6.41e-08,3;UBERON:0002116,6.41e-08,3;UBERON:0001204,6.41e-08,3;UBERON:0001168,6.41e-08,3;UBERON:0004921,8.21e-08,114 | |||
|phase1_expression=0.320297694209588,219.156555997519,262.989560367152,486.059987570076,307.049082457111,81.4214468772665,155.352405996025,0,0,0,0,0,0,0,0,0,0,0,0,0,112.002013128959,0,0,123.51415039651,152.786581190735,266.443631349369,445.838666024642,332.903054499699,11.2113817479261,141.388902795321,58.980315834311,0,0,0,1.1554064790051,2.49351968037739,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.07940638327563,0,0.448026887097336,776.657643328588,0,0,0,0.704217098883403,0,0,0,0,0,0,152.892214943821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2070337406939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2236550135373,56.5924212659985,0,0,0,0.201683524623343,0.22237804384487,0,45.5547899082731,2.14108641141214,2.76468729680296,3.58121649674071,2.9244613067868,35.0539569375146,34.7982260298258,45.6033515752501,0,0,0,0,0,0.350679099451593,0.632365371242573,31.4409615196553,64.3694784149637,156.96119250853,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1247.64934067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,219.156555997519,262.989560367152,486.059987570076,307.049082457111,81.4214468772665,155.352405996025,0,0,0,0,0,0,0,0,0,0,0,0,0,112.002013128959,0,0,123.51415039651,152.786581190735,266.443631349369,445.838666024642,332.903054499699,11.2113817479261,141.388902795321,58.980315834311,0,0,0,1.1554064790051,2.49351968037739,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.07940638327563,0,0.448026887097336,776.657643328588,0,0,0,0.704217098883403,0,0,0,0,0,0,152.892214943821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2070337406939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2236550135373,56.5924212659985,0,0,0,0.201683524623343,0.22237804384487,0,45.5547899082731,2.14108641141214,2.76468729680296,3.58121649674071,2.9244613067868,35.0539569375146,34.7982260298258,45.6033515752501,0,0,0,0,0,0.350679099451593,0.632365371242573,31.4409615196553,64.3694784149637,156.96119250853,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1247.64934067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Dnase1 | |short_description=p1@Dnase1 | ||
}} | }} |
Revision as of 06:03, 15 November 2012
Short description: | p1@Dnase1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnase1_5end |
Coexpression cluster: | MCL_coexpression_mm9:41 |
Association with transcript: | 0bp_to_NM_010061, uc007xzj.2_5end |
EntrezGene: | Dnase1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.24e-17 | 9 |
epithelial cell of alimentary canal | 3.24e-17 | 9 |
brush border epithelial cell | 5.31e-16 | 6 |
gut absorptive cell | 5.31e-16 | 6 |
enterocyte | 5.31e-16 | 6 |
columnar/cuboidal epithelial cell | 1.33e-13 | 7 |
epithelial cell | 1.86e-12 | 25 |
endo-epithelial cell | 9.06e-10 | 15 |
M cell of gut | 4.27e-09 | 3 |
endodermal cell | 1.20e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.97e-36 | 31 |
mucosa | 2.40e-30 | 15 |
intestinal mucosa | 1.05e-25 | 13 |
wall of intestine | 1.05e-25 | 13 |
gastrointestinal system mucosa | 1.05e-25 | 13 |
gastrointestinal system | 3.17e-22 | 47 |
organ component layer | 9.46e-18 | 24 |
epithelium of mucosa | 3.24e-17 | 9 |
gastrointestinal system epithelium | 3.24e-17 | 9 |
intestinal epithelium | 3.24e-17 | 9 |
simple columnar epithelium | 7.87e-14 | 11 |
small intestine | 7.41e-10 | 4 |
digestive system | 1.71e-09 | 116 |
digestive tract | 1.71e-09 | 116 |
primitive gut | 1.71e-09 | 116 |
endoderm-derived structure | 3.11e-09 | 118 |
endoderm | 3.11e-09 | 118 |
presumptive endoderm | 3.11e-09 | 118 |
ileal mucosa | 6.41e-08 | 3 |
ileum | 6.41e-08 | 3 |
mucosa of small intestine | 6.41e-08 | 3 |
wall of small intestine | 6.41e-08 | 3 |
subdivision of digestive tract | 8.21e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.