FFCP PHASE1:Hg19::chr3:42850931..42850953,+: Difference between revisions
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|ontology_enrichment_celltype_v019_2=CL:0000349,1.34e-24,19;CL:0000244,1.06e-15,4;CL:0000731,1.06e-15,4;CL:0002541,1.02e-13,3;CL:0002577,1.01e-12,3;CL:0000239,1.34e-12,3;CL:1000615,1.34e-12,3;CL:0002306,1.34e-12,3;CL:0002681,1.56e-11,12;CL:0002584,1.56e-11,12;CL:1000507,6.67e-10,10;CL:1000494,6.67e-10,10;CL:0002536,2.33e-09,2;CL:1000449,4.27e-09,15;CL:0002537,2.34e-08,5;CL:1000497,5.99e-08,17;CL:0002518,5.99e-08,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@CCBP2,p2@KRBOX1 | |short_description=p1@CCBP2,p2@KRBOX1 | ||
}} | }} |
Revision as of 21:52, 15 November 2012
Short description: | p1@CCBP2, p2@KRBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCBP2_5end, CAGE_peak_2_at_KRBOX1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000451200, ENST00000460855, ENST00000487368, ENST00000498111, uc003cmd.1_5end |
EntrezGene: | 100506243,1238 |
HGNC: | 1565&submit=Submit 38708, 1565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.34e-24 | 19 |
transitional epithelial cell | 1.06e-15 | 4 |
urothelial cell | 1.06e-15 | 4 |
chorionic membrane mesenchymal stem cell | 1.02e-13 | 3 |
placental epithelial cell | 1.01e-12 | 3 |
brush border epithelial cell | 1.34e-12 | 3 |
kidney cortex tubule cell | 1.34e-12 | 3 |
epithelial cell of proximal tubule | 1.34e-12 | 3 |
kidney cortical cell | 1.56e-11 | 12 |
renal cortical epithelial cell | 1.56e-11 | 12 |
kidney tubule cell | 6.67e-10 | 10 |
nephron tubule epithelial cell | 6.67e-10 | 10 |
amniotic epithelial cell | 2.33e-09 | 2 |
epithelial cell of nephron | 4.27e-09 | 15 |
amnion mesenchymal stem cell | 2.34e-08 | 5 |
kidney cell | 5.99e-08 | 17 |
kidney epithelial cell | 5.99e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.