FFCP PHASE1:Hg19::chr11:35252320..35252338,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!3.87e-21!42;CL:0000860!1.91e-20!45;CL:0000557!1.48e-19!71;CL:0002009!1.76e-19!65;CL:0000839!3.29e-19!70;CL:0002194!5.94e-19!63;CL:0000576!5.94e-19!63;CL:0000040!5.94e-19!63;CL:0000559!5.94e-19!63;CL:0000766!1.45e-17!76;CL:0002371!1.12e-11!591;CL:0000048!4.79e-11!430;CL:0000763!5.11e-11!112;CL:0000049!5.11e-11!112;CL:0000723!9.15e-11!436;CL:0002320!2.67e-10!365;CL:0000144!3.29e-10!625;CL:0000134!3.33e-10!358;CL:0000003!9.62e-10!722;CL:0000219!1.07e-09!390;CL:0000034!2.09e-09!444;CL:0002031!5.06e-09!124;CL:0000548!1.04e-08!679;CL:0000004!1.04e-08!679;CL:0000255!1.04e-08!679;CL:0000012!1.99e-08!682;CL:0002087!3.75e-08!119;CL:0000738!1.88e-07!140 | |ontology_enrichment_celltype=CL:0002057!3.87e-21!42;CL:0000860!1.91e-20!45;CL:0000557!1.48e-19!71;CL:0002009!1.76e-19!65;CL:0000839!3.29e-19!70;CL:0002194!5.94e-19!63;CL:0000576!5.94e-19!63;CL:0000040!5.94e-19!63;CL:0000559!5.94e-19!63;CL:0000766!1.45e-17!76;CL:0002371!1.12e-11!591;CL:0000048!4.79e-11!430;CL:0000763!5.11e-11!112;CL:0000049!5.11e-11!112;CL:0000723!9.15e-11!436;CL:0002320!2.67e-10!365;CL:0000144!3.29e-10!625;CL:0000134!3.33e-10!358;CL:0000003!9.62e-10!722;CL:0000219!1.07e-09!390;CL:0000034!2.09e-09!444;CL:0002031!5.06e-09!124;CL:0000548!1.04e-08!679;CL:0000004!1.04e-08!679;CL:0000255!1.04e-08!679;CL:0000012!1.99e-08!682;CL:0002087!3.75e-08!119;CL:0000738!1.88e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.24e-32;33!CL:0002057;6.24e-32;33!CL:0000473;1.63e-26;39!CL:0000234;1.63e-26;39!CL:0000576;7.72e-16;48!CL:0000766;6.19e-12;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.24e-32;33!CL:0002057;6.24e-32;33!CL:0000473;1.63e-26;39!CL:0000234;1.63e-26;39!CL:0000576;7.72e-16;48!CL:0000766;6.19e-12;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.85e-31,48;CL:0000234,2.85e-31,48;CL:0000860,2.31e-30,42;CL:0002057,2.31e-30,42;CL:0000557,1.39e-26,67;CL:0000839,6.22e-26,66;CL:0002194,2.57e-25,59;CL:0000576,2.57e-25,59;CL:0000040,2.57e-25,59;CL:0000559,2.57e-25,59;CL:0002009,2.81e-25,61;CL:0000766,1.70e-24,72;CL:0000048,8.92e-16,427;CL:0000723,1.55e-15,433;CL:0000034,1.68e-14,441;CL:0000219,3.42e-14,386;CL:0000134,6.83e-14,354;CL:0000763,1.13e-13,108;CL:0000049,1.13e-13,108;CL:0002320,2.47e-13,361;CL:0002031,2.64e-11,120;CL:0002087,2.64e-09,115;CL:0000738,3.82e-09,136;CL:0002032,9.85e-07,161;CL:0000837,9.85e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-22;42 | |ontology_enrichment_development_v019=CL:0002057;2.83e-22;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.59e-18!80;UBERON:0002204!4.17e-17!167;UBERON:0001474!6.28e-15!86;UBERON:0004765!6.41e-15!101;UBERON:0001434!6.41e-15!101;UBERON:0002390!6.79e-14!102;UBERON:0003061!6.79e-14!102;UBERON:0002193!9.49e-11!112;UBERON:0002384!5.10e-10!375;UBERON:0002405!2.00e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!6.59e-18!80;UBERON:0002204!4.17e-17!167;UBERON:0001474!6.28e-15!86;UBERON:0004765!6.41e-15!101;UBERON:0001434!6.41e-15!101;UBERON:0002390!6.79e-14!102;UBERON:0003061!6.79e-14!102;UBERON:0002193!9.49e-11!112;UBERON:0002384!5.10e-10!375;UBERON:0002405!2.00e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.96e-25,76;UBERON:0001474,1.24e-21,82;UBERON:0004765,1.61e-20,90;UBERON:0002204,2.44e-19,167;UBERON:0001434,8.98e-19,100;UBERON:0002405,9.19e-18,93;UBERON:0002390,6.61e-17,98;UBERON:0003061,6.61e-17,98;UBERON:0002193,9.19e-14,108;UBERON:0002384,5.51e-13,371;UBERON:0000926,3.23e-09,315;UBERON:0004120,3.23e-09,315;UBERON:0006603,3.23e-09,315;UBERON:0003081,1.54e-08,203 | |||
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| ||
|short_description=p13@CD44 | |short_description=p13@CD44 | ||
}} | }} |
Revision as of 22:23, 16 November 2012
Short description: | p13@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 254bp_to_AB073901_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.85e-31 | 48 |
phagocyte | 2.85e-31 | 48 |
classical monocyte | 2.31e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-30 | 42 |
granulocyte monocyte progenitor cell | 1.39e-26 | 67 |
myeloid lineage restricted progenitor cell | 6.22e-26 | 66 |
monopoietic cell | 2.57e-25 | 59 |
monocyte | 2.57e-25 | 59 |
monoblast | 2.57e-25 | 59 |
promonocyte | 2.57e-25 | 59 |
macrophage dendritic cell progenitor | 2.81e-25 | 61 |
myeloid leukocyte | 1.70e-24 | 72 |
multi fate stem cell | 8.92e-16 | 427 |
somatic stem cell | 1.55e-15 | 433 |
stem cell | 1.68e-14 | 441 |
motile cell | 3.42e-14 | 386 |
mesenchymal cell | 6.83e-14 | 354 |
myeloid cell | 1.13e-13 | 108 |
common myeloid progenitor | 1.13e-13 | 108 |
connective tissue cell | 2.47e-13 | 361 |
hematopoietic lineage restricted progenitor cell | 2.64e-11 | 120 |
nongranular leukocyte | 2.64e-09 | 115 |
leukocyte | 3.82e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.85e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.85e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.96e-25 | 76 |
bone element | 1.24e-21 | 82 |
skeletal element | 1.61e-20 | 90 |
musculoskeletal system | 2.44e-19 | 167 |
skeletal system | 8.98e-19 | 100 |
immune system | 9.19e-18 | 93 |
hematopoietic system | 6.61e-17 | 98 |
blood island | 6.61e-17 | 98 |
hemolymphoid system | 9.19e-14 | 108 |
connective tissue | 5.51e-13 | 371 |
mesoderm | 3.23e-09 | 315 |
mesoderm-derived structure | 3.23e-09 | 315 |
presumptive mesoderm | 3.23e-09 | 315 |
lateral plate mesoderm | 1.54e-08 | 203 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.