FFCP PHASE1:Hg19::chr17:38708568..38708590,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.24e-13!180;CL:0000057!1.65e-11!75;CL:0002540!2.92e-09!6;CL:0002334!3.43e-09!12;CL:0000569!6.08e-07!4;CL:0000011!6.08e-07!4 | |ontology_enrichment_celltype=CL:0000055!3.24e-13!180;CL:0000057!1.65e-11!75;CL:0002540!2.92e-09!6;CL:0002334!3.43e-09!12;CL:0000569!6.08e-07!4;CL:0000011!6.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000569;1.08e-13;4!CL:0002602;2.03e-12;2!CL:0002195;4.88e-12;2!CL:0002571;4.88e-12;2!CL:0002540;4.14e-09;6!CL:0000515;2.59e-08;3!CL:0000134;1.17e-07;55!CL:0002581;7.55e-07;1 | |ontology_enrichment_celltype_v019=CL:0000569;1.08e-13;4!CL:0002602;2.03e-12;2!CL:0002195;4.88e-12;2!CL:0002571;4.88e-12;2!CL:0002540;4.14e-09;6!CL:0000515;2.59e-08;3!CL:0000134;1.17e-07;55!CL:0002581;7.55e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000569,6.64e-14,4;CL:0000011,6.64e-14,4;CL:0002195,1.58e-12,2;CL:0002571,1.58e-12,2;CL:0002602,2.79e-12,2;CL:0002540,3.62e-09,6;CL:0002581,6.76e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000011;1.08e-13;4!UBERON:0005425;7.55e-07;1 | |ontology_enrichment_development_v019=CL:0000011;1.08e-13;4!UBERON:0005425;7.55e-07;1 | ||
|ontology_enrichment_disease=DOID:2394!1.09e-07!14 | |ontology_enrichment_disease=DOID:2394!1.09e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2513;7.55e-07;1 | |ontology_enrichment_disease_v019=DOID:2513;7.55e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,5.37e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.05e-08!83;UBERON:0002329!8.05e-08!83;UBERON:0003077!8.05e-08!83;UBERON:0003059!8.05e-08!83;UBERON:0007282!8.05e-08!83;UBERON:0009618!8.05e-08!83;UBERON:0007285!8.05e-08!83;UBERON:0005284!2.54e-07!5;UBERON:0002616!5.13e-07!59;UBERON:0002118!6.86e-07!5;UBERON:0004532!6.86e-07!5 | |ontology_enrichment_uberon=UBERON:0000914!8.05e-08!83;UBERON:0002329!8.05e-08!83;UBERON:0003077!8.05e-08!83;UBERON:0003059!8.05e-08!83;UBERON:0007282!8.05e-08!83;UBERON:0009618!8.05e-08!83;UBERON:0007285!8.05e-08!83;UBERON:0005284!2.54e-07!5;UBERON:0002616!5.13e-07!59;UBERON:0002118!6.86e-07!5;UBERON:0004532!6.86e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0006444;2.03e-12;2!UBERON:0001995;2.03e-12;2!UBERON:0004715;2.03e-12;2!UBERON:0004905;1.97e-11;8!UBERON:0000982;1.97e-11;8!UBERON:0004770;1.97e-11;8!UBERON:0001434;8.55e-11;36!UBERON:0011135;9.58e-11;5!UBERON:0002216;9.58e-11;5!UBERON:0011134;9.58e-11;5!UBERON:0002209;9.58e-11;5!UBERON:0002213;9.58e-11;5!UBERON:0007844;9.58e-11;5!UBERON:0011138;9.58e-11;5!UBERON:0001130;9.58e-11;5!UBERON:0001066;9.58e-11;5!UBERON:0001468;9.58e-11;5!UBERON:0004765;6.85e-10;26!UBERON:0002418;1.45e-08;3!UBERON:0004755;1.45e-08;3!UBERON:0000075;1.47e-08;16!UBERON:0002371;7.38e-08;12!UBERON:0007195;2.35e-07;1!UBERON:0000941;7.55e-07;1!UBERON:0001785;7.55e-07;1!UBERON:0002464;7.55e-07;1!UBERON:0004904;7.55e-07;1!UBERON:0001021;7.55e-07;1!UBERON:0002204;8.59e-07;70 | |ontology_enrichment_uberon_v019=UBERON:0006444;2.03e-12;2!UBERON:0001995;2.03e-12;2!UBERON:0004715;2.03e-12;2!UBERON:0004905;1.97e-11;8!UBERON:0000982;1.97e-11;8!UBERON:0004770;1.97e-11;8!UBERON:0001434;8.55e-11;36!UBERON:0011135;9.58e-11;5!UBERON:0002216;9.58e-11;5!UBERON:0011134;9.58e-11;5!UBERON:0002209;9.58e-11;5!UBERON:0002213;9.58e-11;5!UBERON:0007844;9.58e-11;5!UBERON:0011138;9.58e-11;5!UBERON:0001130;9.58e-11;5!UBERON:0001066;9.58e-11;5!UBERON:0001468;9.58e-11;5!UBERON:0004765;6.85e-10;26!UBERON:0002418;1.45e-08;3!UBERON:0004755;1.45e-08;3!UBERON:0000075;1.47e-08;16!UBERON:0002371;7.38e-08;12!UBERON:0007195;2.35e-07;1!UBERON:0000941;7.55e-07;1!UBERON:0001785;7.55e-07;1!UBERON:0002464;7.55e-07;1!UBERON:0004904;7.55e-07;1!UBERON:0001021;7.55e-07;1!UBERON:0002204;8.59e-07;70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,2.79e-12,2;UBERON:0001995,2.79e-12,2;UBERON:0004715,2.79e-12,2;UBERON:0004905,2.43e-11,8;UBERON:0000982,2.43e-11,8;UBERON:0004770,2.43e-11,8;UBERON:0011135,1.05e-10,5;UBERON:0002216,1.05e-10,5;UBERON:0011134,1.05e-10,5;UBERON:0002209,1.05e-10,5;UBERON:0002213,1.05e-10,5;UBERON:0005856,1.05e-10,5;UBERON:0005866,1.05e-10,5;UBERON:0005863,1.05e-10,5;UBERON:0007844,1.05e-10,5;UBERON:0011138,1.05e-10,5;UBERON:0001130,1.05e-10,5;UBERON:0001066,1.05e-10,5;UBERON:0001468,1.05e-10,5;UBERON:0002418,1.79e-08,3;UBERON:0004755,1.79e-08,3;UBERON:0000075,1.85e-08,16;UBERON:0007195,2.36e-07,1;UBERON:0000941,7.15e-07,1;UBERON:0001785,7.15e-07,1;UBERON:0002464,7.15e-07,1;UBERON:0004904,7.15e-07,1;UBERON:0001021,7.15e-07,1;UBERON:0003902,7.15e-07,1;UBERON:0005425,7.15e-07,1;UBERON:0002384,7.42e-07,371 | |||
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| ||
|short_description=p@chr17:38708568..38708590,+ | |short_description=p@chr17:38708568..38708590,+ | ||
}} | }} |
Revision as of 22:03, 17 November 2012
Short description: | p@chr17:38708568..38708590, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38708568..38708590, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 6.64e-14 | 4 |
migratory trunk neural crest cell | 6.64e-14 | 4 |
hepatic stem cell | 1.58e-12 | 2 |
hepatic mesenchymal stem cell | 1.58e-12 | 2 |
annulus pulposus cell | 2.79e-12 | 2 |
mesenchymal stem cell of the bone marrow | 3.62e-09 | 6 |
perirenal preadipocyte | 6.76e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 2.79e-12 | 2 |
fibrocartilage | 2.79e-12 | 2 |
annulus fibrosus disci intervertebralis | 2.79e-12 | 2 |
articulation | 2.43e-11 | 8 |
skeletal joint | 2.43e-11 | 8 |
articular system | 2.43e-11 | 8 |
intervertebral cartilage | 1.05e-10 | 5 |
symphysis | 1.05e-10 | 5 |
nonsynovial joint | 1.05e-10 | 5 |
fibrous joint | 1.05e-10 | 5 |
cartilaginous joint | 1.05e-10 | 5 |
developing mesenchymal condensation | 1.05e-10 | 5 |
pre-cartilage condensation | 1.05e-10 | 5 |
cartilaginous condensation | 1.05e-10 | 5 |
cartilage element | 1.05e-10 | 5 |
post-cranial axial skeletal system | 1.05e-10 | 5 |
vertebral column | 1.05e-10 | 5 |
intervertebral disk | 1.05e-10 | 5 |
intervertebral joint | 1.05e-10 | 5 |
cartilage tissue | 1.79e-08 | 3 |
skeletal tissue | 1.79e-08 | 3 |
subdivision of skeletal system | 1.85e-08 | 16 |
stroma of bone marrow | 2.36e-07 | 1 |
cranial nerve II | 7.15e-07 | 1 |
cranial nerve | 7.15e-07 | 1 |
nerve trunk | 7.15e-07 | 1 |
nerve connecting eye with brain | 7.15e-07 | 1 |
nerve | 7.15e-07 | 1 |
retinal neural layer | 7.15e-07 | 1 |
presumptive neural retina | 7.15e-07 | 1 |
connective tissue | 7.42e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.37e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.