FFCP PHASE1:Hg19::chr1:19536744..19536770,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000763!7.59e-20!112;CL:0000049!7.59e-20!112;CL:0000037!1.38e-18!172;CL:0000566!1.38e-18!172;CL:0002032!4.00e-17!165;CL:0000837!4.00e-17!165;CL:0002057!1.18e-16!42;CL:0000988!1.93e-16!182;CL:0000738!1.17e-15!140;CL:0000766!2.35e-15!76;CL:0000860!1.60e-14!45;CL:0000557!5.57e-13!71;CL:0000839!4.05e-12!70;CL:0002031!1.33e-10!124;CL:0002009!2.21e-10!65;CL:0002194!1.57e-09!63;CL:0000576!1.57e-09!63;CL:0000040!1.57e-09!63;CL:0000559!1.57e-09!63;CL:0002087!1.47e-08!119 | |ontology_enrichment_celltype=CL:0000763!7.59e-20!112;CL:0000049!7.59e-20!112;CL:0000037!1.38e-18!172;CL:0000566!1.38e-18!172;CL:0002032!4.00e-17!165;CL:0000837!4.00e-17!165;CL:0002057!1.18e-16!42;CL:0000988!1.93e-16!182;CL:0000738!1.17e-15!140;CL:0000766!2.35e-15!76;CL:0000860!1.60e-14!45;CL:0000557!5.57e-13!71;CL:0000839!4.05e-12!70;CL:0002031!1.33e-10!124;CL:0002009!2.21e-10!65;CL:0002194!1.57e-09!63;CL:0000576!1.57e-09!63;CL:0000040!1.57e-09!63;CL:0000559!1.57e-09!63;CL:0002087!1.47e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.71e-17;33!CL:0002057;3.71e-17;33!CL:0000473;3.94e-11;39!CL:0000234;3.94e-11;39!CL:0000576;1.69e-08;48!CL:0000766;2.32e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;3.71e-17;33!CL:0002057;3.71e-17;33!CL:0000473;3.94e-11;39!CL:0000234;3.94e-11;39!CL:0000576;1.69e-08;48!CL:0000766;2.32e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.70e-21,108;CL:0000049,7.70e-21,108;CL:0000037,3.13e-19,168;CL:0002032,9.46e-18,161;CL:0000837,9.46e-18,161;CL:0000988,2.83e-17,177;CL:0000860,1.18e-16,42;CL:0002057,1.18e-16,42;CL:0000766,1.77e-16,72;CL:0000738,2.50e-16,136;CL:0000557,5.24e-14,67;CL:0000473,3.07e-13,48;CL:0000234,3.07e-13,48;CL:0000839,4.26e-13,66;CL:0002009,2.74e-11,61;CL:0002031,3.87e-11,120;CL:0002194,2.16e-10,59;CL:0000576,2.16e-10,59;CL:0000040,2.16e-10,59;CL:0000559,2.16e-10,59;CL:0002087,5.07e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-12;42 | |ontology_enrichment_development_v019=CL:0002057;1.23e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.89e-11!86;UBERON:0002390!1.18e-09!102;UBERON:0003061!1.18e-09!102;UBERON:0002371!1.21e-09!80;UBERON:0002193!3.58e-08!112;UBERON:0002405!5.06e-07!115;UBERON:0007023!9.57e-07!115 | |ontology_enrichment_uberon=UBERON:0001474!3.89e-11!86;UBERON:0002390!1.18e-09!102;UBERON:0003061!1.18e-09!102;UBERON:0002371!1.21e-09!80;UBERON:0002193!3.58e-08!112;UBERON:0002405!5.06e-07!115;UBERON:0007023!9.57e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.78e-12,82;UBERON:0002371,2.35e-10,76;UBERON:0002390,3.10e-10,98;UBERON:0003061,3.10e-10,98;UBERON:0002405,6.67e-09,93;UBERON:0002193,1.22e-08,108;UBERON:0004765,1.50e-07,90;UBERON:0007023,8.36e-07,114 | |||
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| ||
|short_description=p1@UBR4 | |short_description=p1@UBR4 | ||
}} | }} |
Revision as of 11:16, 18 November 2012
Short description: | p1@UBR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UBR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375217, ENST00000375226, ENST00000375254, ENST00000375267, NM_020765, uc001bbi.2_5end |
EntrezGene: | UBR4 |
HGNC: | 30313 |
UniProt: | Q5T4S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.70e-21 | 108 |
common myeloid progenitor | 7.70e-21 | 108 |
hematopoietic stem cell | 3.13e-19 | 168 |
hematopoietic oligopotent progenitor cell | 9.46e-18 | 161 |
hematopoietic multipotent progenitor cell | 9.46e-18 | 161 |
hematopoietic cell | 2.83e-17 | 177 |
classical monocyte | 1.18e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-16 | 42 |
myeloid leukocyte | 1.77e-16 | 72 |
leukocyte | 2.50e-16 | 136 |
granulocyte monocyte progenitor cell | 5.24e-14 | 67 |
defensive cell | 3.07e-13 | 48 |
phagocyte | 3.07e-13 | 48 |
myeloid lineage restricted progenitor cell | 4.26e-13 | 66 |
macrophage dendritic cell progenitor | 2.74e-11 | 61 |
hematopoietic lineage restricted progenitor cell | 3.87e-11 | 120 |
monopoietic cell | 2.16e-10 | 59 |
monocyte | 2.16e-10 | 59 |
monoblast | 2.16e-10 | 59 |
promonocyte | 2.16e-10 | 59 |
nongranular leukocyte | 5.07e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone element | 6.78e-12 | 82 |
bone marrow | 2.35e-10 | 76 |
hematopoietic system | 3.10e-10 | 98 |
blood island | 3.10e-10 | 98 |
immune system | 6.67e-09 | 93 |
hemolymphoid system | 1.22e-08 | 108 |
skeletal element | 1.50e-07 | 90 |
adult organism | 8.36e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.