FFCP PHASE1:Hg19::chr8:146078927..146078951,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!4.90e-31!76;CL:0002009!1.06e-28!65;CL:0002194!1.32e-27!63;CL:0000576!1.32e-27!63;CL:0000040!1.32e-27!63;CL:0000559!1.32e-27!63;CL:0000557!6.42e-27!71;CL:0002057!6.47e-27!42;CL:0000860!1.48e-25!45;CL:0000839!2.53e-25!70;CL:0000763!9.73e-17!112;CL:0000049!9.73e-17!112;CL:0000048!3.56e-09!430;CL:0002320!8.28e-09!365;CL:0000723!1.43e-08!436;CL:0000134!2.02e-08!358;CL:0000034!6.08e-08!444;CL:0000738!7.12e-08!140 | |ontology_enrichment_celltype=CL:0000766!4.90e-31!76;CL:0002009!1.06e-28!65;CL:0002194!1.32e-27!63;CL:0000576!1.32e-27!63;CL:0000040!1.32e-27!63;CL:0000559!1.32e-27!63;CL:0000557!6.42e-27!71;CL:0002057!6.47e-27!42;CL:0000860!1.48e-25!45;CL:0000839!2.53e-25!70;CL:0000763!9.73e-17!112;CL:0000049!9.73e-17!112;CL:0000048!3.56e-09!430;CL:0002320!8.28e-09!365;CL:0000723!1.43e-08!436;CL:0000134!2.02e-08!358;CL:0000034!6.08e-08!444;CL:0000738!7.12e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-25;33!CL:0002057;3.31e-25;33!CL:0000473;2.04e-24;39!CL:0000234;2.04e-24;39!CL:0000576;9.34e-23;48!CL:0000766;9.29e-19;69!CL:0000763;1.36e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.31e-25;33!CL:0002057;3.31e-25;33!CL:0000473;2.04e-24;39!CL:0000234;2.04e-24;39!CL:0000576;9.34e-23;48!CL:0000766;9.29e-19;69!CL:0000763;1.36e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.99e-41,72;CL:0002009,1.05e-38,61;CL:0000473,2.49e-37,48;CL:0000234,2.49e-37,48;CL:0002194,2.60e-37,59;CL:0000576,2.60e-37,59;CL:0000040,2.60e-37,59;CL:0000559,2.60e-37,59;CL:0000557,1.16e-36,67;CL:0000839,2.74e-34,66;CL:0000860,1.86e-33,42;CL:0002057,1.86e-33,42;CL:0000763,2.61e-22,108;CL:0000049,2.61e-22,108;CL:0000738,6.33e-15,136;CL:0002320,2.64e-13,361;CL:0000134,5.76e-13,354;CL:0000048,6.26e-13,427;CL:0000723,3.26e-12,433;CL:0002031,5.66e-12,120;CL:0000034,1.27e-11,441;CL:0002087,3.26e-11,115;CL:0000219,2.45e-10,386;CL:0000988,1.34e-08,177;CL:0002032,1.40e-08,161;CL:0000837,1.40e-08,161;CL:0000037,2.81e-08,168;CL:0002393,1.67e-07,9;CL:0002397,1.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-24;42!CL:0000049;5.13e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.19e-24;42!CL:0000049;5.13e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.22e-24!80;UBERON:0003081!8.64e-22!216;UBERON:0002193!1.33e-21!112;UBERON:0001474!2.24e-21!86;UBERON:0002390!9.84e-21!102;UBERON:0003061!9.84e-21!102;UBERON:0004765!2.15e-20!101;UBERON:0001434!2.15e-20!101;UBERON:0002204!5.65e-18!167;UBERON:0002405!1.41e-17!115;UBERON:0000926!1.14e-16!448;UBERON:0004120!1.14e-16!448;UBERON:0006603!1.14e-16!448;UBERON:0002384!4.31e-08!375;UBERON:0000468!8.95e-08!659;UBERON:0000480!9.93e-08!626;UBERON:0000467!1.02e-07!625 | |ontology_enrichment_uberon=UBERON:0002371!2.22e-24!80;UBERON:0003081!8.64e-22!216;UBERON:0002193!1.33e-21!112;UBERON:0001474!2.24e-21!86;UBERON:0002390!9.84e-21!102;UBERON:0003061!9.84e-21!102;UBERON:0004765!2.15e-20!101;UBERON:0001434!2.15e-20!101;UBERON:0002204!5.65e-18!167;UBERON:0002405!1.41e-17!115;UBERON:0000926!1.14e-16!448;UBERON:0004120!1.14e-16!448;UBERON:0006603!1.14e-16!448;UBERON:0002384!4.31e-08!375;UBERON:0000468!8.95e-08!659;UBERON:0000480!9.93e-08!626;UBERON:0000467!1.02e-07!625 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-33,76;UBERON:0003081,1.04e-29,203;UBERON:0001474,1.44e-29,82;UBERON:0000926,6.23e-29,315;UBERON:0004120,6.23e-29,315;UBERON:0006603,6.23e-29,315;UBERON:0002390,8.29e-29,98;UBERON:0003061,8.29e-29,98;UBERON:0002405,2.30e-28,93;UBERON:0002193,2.80e-28,108;UBERON:0004765,1.16e-27,90;UBERON:0001434,2.91e-26,100;UBERON:0002204,3.47e-20,167;UBERON:0002384,7.78e-13,371;UBERON:0002050,2.67e-09,564;UBERON:0000923,3.42e-09,560;UBERON:0010316,3.42e-09,560;UBERON:0005291,3.42e-09,560;UBERON:0006598,3.42e-09,560;UBERON:0010317,3.42e-09,560;UBERON:0002532,3.42e-09,560;UBERON:0005423,3.51e-07,581 | |||
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| ||
|short_description=p4@COMMD5 | |short_description=p4@COMMD5 | ||
}} | }} |
Revision as of 11:08, 19 November 2012
Short description: | p4@COMMD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_COMMD5_5end |
Coexpression cluster: | C3670_CD14_Mesenchymal_Eosinophils_CD14CD16_Monocytederived_Neutrophils_Macrophage |
Association with transcript: | 0bp_to_NM_001081003_5end |
EntrezGene: | COMMD5 |
HGNC: | 17902 |
UniProt: | Q9GZQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.99e-41 | 72 |
macrophage dendritic cell progenitor | 1.05e-38 | 61 |
defensive cell | 2.49e-37 | 48 |
phagocyte | 2.49e-37 | 48 |
monopoietic cell | 2.60e-37 | 59 |
monocyte | 2.60e-37 | 59 |
monoblast | 2.60e-37 | 59 |
promonocyte | 2.60e-37 | 59 |
granulocyte monocyte progenitor cell | 1.16e-36 | 67 |
myeloid lineage restricted progenitor cell | 2.74e-34 | 66 |
classical monocyte | 1.86e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-33 | 42 |
myeloid cell | 2.61e-22 | 108 |
common myeloid progenitor | 2.61e-22 | 108 |
leukocyte | 6.33e-15 | 136 |
connective tissue cell | 2.64e-13 | 361 |
mesenchymal cell | 5.76e-13 | 354 |
multi fate stem cell | 6.26e-13 | 427 |
somatic stem cell | 3.26e-12 | 433 |
hematopoietic lineage restricted progenitor cell | 5.66e-12 | 120 |
stem cell | 1.27e-11 | 441 |
nongranular leukocyte | 3.26e-11 | 115 |
motile cell | 2.45e-10 | 386 |
hematopoietic cell | 1.34e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.40e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-08 | 161 |
hematopoietic stem cell | 2.81e-08 | 168 |
intermediate monocyte | 1.67e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-33 | 76 |
lateral plate mesoderm | 1.04e-29 | 203 |
bone element | 1.44e-29 | 82 |
mesoderm | 6.23e-29 | 315 |
mesoderm-derived structure | 6.23e-29 | 315 |
presumptive mesoderm | 6.23e-29 | 315 |
hematopoietic system | 8.29e-29 | 98 |
blood island | 8.29e-29 | 98 |
immune system | 2.30e-28 | 93 |
hemolymphoid system | 2.80e-28 | 108 |
skeletal element | 1.16e-27 | 90 |
skeletal system | 2.91e-26 | 100 |
musculoskeletal system | 3.47e-20 | 167 |
connective tissue | 7.78e-13 | 371 |
embryonic structure | 2.67e-09 | 564 |
germ layer | 3.42e-09 | 560 |
germ layer / neural crest | 3.42e-09 | 560 |
embryonic tissue | 3.42e-09 | 560 |
presumptive structure | 3.42e-09 | 560 |
germ layer / neural crest derived structure | 3.42e-09 | 560 |
epiblast (generic) | 3.42e-09 | 560 |
developing anatomical structure | 3.51e-07 | 581 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.