FFCP PHASE1:Hg19::chr6:160101609..160101626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6648 | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11180 | |HGNC=11180 | ||
|TSSclassifier=N | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-206bp_to_uc003qsf.3_5end | |association_with_transcript=-206bp_to_uc003qsf.3_5end | ||
Revision as of 08:57, 10 July 2013
| Short description: | p21@SOD2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_21_at_SOD2_5end |
| Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
| Association with transcript: | -206bp_to_uc003qsf.3_5end |
| EntrezGene: | SOD2 |
| HGNC: | 11180 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p21@SOD2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 4.64e-40 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.64e-40 | 42 |
| defensive cell | 5.20e-37 | 48 |
| phagocyte | 5.20e-37 | 48 |
| myeloid leukocyte | 1.07e-30 | 72 |
| monopoietic cell | 3.69e-28 | 59 |
| monocyte | 3.69e-28 | 59 |
| monoblast | 3.69e-28 | 59 |
| promonocyte | 3.69e-28 | 59 |
| macrophage dendritic cell progenitor | 5.10e-27 | 61 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 2.25e-20 | 76 |
| immune system | 3.51e-20 | 93 |
| hemolymphoid system | 4.43e-19 | 108 |
| bone element | 2.13e-18 | 82 |
| skeletal system | 6.51e-18 | 100 |
| hematopoietic system | 5.51e-17 | 98 |
| blood island | 5.51e-17 | 98 |
| skeletal element | 3.55e-16 | 90 |
| musculoskeletal system | 2.67e-14 | 167 |
| lateral plate mesoderm | 4.84e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
