FFCP PHASE1:Hg19::chr10:122509543..122509548,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:122509543..122509548,+|id=chr10:122509543..122509548,+|ontology_enrichment_celltype=CL:0002009!6.75e-50!65;CL:0002194!3.69e-49!63;CL:0000576!3.69e-49!63;CL:0000040!3.69e-49!63;CL:0000559!3.69e-49!63;CL:0000557!1.32e-44!71;CL:0000839!5.32e-43!70;CL:0002057!6.22e-41!42;CL:0000766!6.55e-41!76;CL:0000763!5.64e-38!112;CL:0000049!5.64e-38!112;CL:0000860!1.52e-37!45;CL:0002087!7.89e-27!119;CL:0002032!1.04e-25!165;CL:0000837!1.04e-25!165;CL:0002031!2.27e-25!124;CL:0000037!4.28e-25!172;CL:0000566!4.28e-25!172;CL:0000738!2.49e-23!140;CL:0000988!7.63e-23!182;CL:0000235!4.13e-08!10;CL:0002393!1.01e-07!9;CL:0002397!1.01e-07!9|ontology_enrichment_celltype_v019=CL:0000235;5.65e-59;6!CL:0000473;1.80e-29;39!CL:0000234;1.80e-29;39!CL:0002619;1.61e-14;3!CL:0000576;2.24e-10;48!CL:0000766;2.32e-10;69!CL:0000860;3.01e-09;33!CL:0002057;3.01e-09;33!CL:0000763;3.36e-08;100|ontology_enrichment_celltype_v019_2=CL:0000235,6.27e-59,6;CL:0002194,2.76e-30,59;CL:0000576,2.76e-30,59;CL:0000040,2.76e-30,59;CL:0000559,2.76e-30,59;CL:0002009,3.05e-29,61;CL:0000473,6.56e-28,48;CL:0000234,6.56e-28,48;CL:0000839,6.59e-27,66;CL:0000557,1.76e-26,67;CL:0000766,1.59e-24,72;CL:0000763,6.10e-21,108;CL:0000049,6.10e-21,108;CL:0002087,1.43e-19,115;CL:0002031,1.16e-18,120;CL:0002032,2.41e-17,161;CL:0000837,2.41e-17,161;CL:0000037,1.61e-16,168;CL:0000738,3.34e-16,136;CL:0000988,1.49e-15,177;CL:0002619,1.98e-14,3;CL:0000860,4.00e-08,42;CL:0002057,4.00e-08,42|ontology_enrichment_development_v019=CL:0000049;2.45e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;8.62e-12;1!DOID:0070004;8.62e-12;1|ontology_enrichment_disease_v019_2=DOID:4960,8.62e-12,1;DOID:0070004,8.62e-12,1|ontology_enrichment_uberon=UBERON:0002371!1.81e-40!80;UBERON:0001474!9.83e-37!86;UBERON:0002390!1.16e-33!102;UBERON:0003061!1.16e-33!102;UBERON:0004765!7.08e-31!101;UBERON:0001434!7.08e-31!101;UBERON:0002193!8.00e-31!112;UBERON:0002405!9.96e-27!115;UBERON:0002204!2.43e-15!167;UBERON:0003081!7.67e-12!216;UBERON:0007023!8.66e-12!115;UBERON:0000062!6.18e-08!511|ontology_enrichment_uberon_v019=UBERON:0002171;1.60e-11;1!UBERON:0006518;1.60e-11;1!UBERON:0008949;1.60e-11;1!UBERON:0000101;1.60e-11;1!UBERON:0002167;1.60e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.85e-27,76;UBERON:0001474,9.87e-25,82;UBERON:0004765,2.31e-22,90;UBERON:0002405,1.41e-21,93;UBERON:0002390,2.25e-20,98;UBERON:0003061,2.25e-20,98;UBERON:0001434,6.31e-20,100;UBERON:0002193,2.69e-18,108;UBERON:0002171,1.06e-11,1;UBERON:0006518,1.06e-11,1;UBERON:0008949,1.06e-11,1;UBERON:0000101,1.06e-11,1;UBERON:0002167,1.06e-11,1;UBERON:0002204,4.69e-11,167;UBERON:0003081,1.11e-08,203;UBERON:0002384,5.79e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,1.39440961044543,0,0,0,0.802177789880567,0.434021741431704,2.46307021663917,0,2.06060454107349,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,2.5819387343353,5.41705946377367,0.376484679085209,0,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.598390972864896,0,0,0,1.86846674698672,1.50749199154046,1.5644487552606,1.08594422352558,0,0.368277635987565,0,0.211255286311942,0.637812899895131,0,0.44931452458598,0.300353785683013,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,1.63802985597466,2.82399208348584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,1.34053759092657,0,0,0,0,0.156679895773023,2.50634477090067,0.50787533340481,0,0.605399121573143,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:122509543..122509548,+ | |||
|id=chr10:122509543..122509548,+ | |||
|ontology_enrichment_celltype=CL:0002009!6.75e-50!65;CL:0002194!3.69e-49!63;CL:0000576!3.69e-49!63;CL:0000040!3.69e-49!63;CL:0000559!3.69e-49!63;CL:0000557!1.32e-44!71;CL:0000839!5.32e-43!70;CL:0002057!6.22e-41!42;CL:0000766!6.55e-41!76;CL:0000763!5.64e-38!112;CL:0000049!5.64e-38!112;CL:0000860!1.52e-37!45;CL:0002087!7.89e-27!119;CL:0002032!1.04e-25!165;CL:0000837!1.04e-25!165;CL:0002031!2.27e-25!124;CL:0000037!4.28e-25!172;CL:0000566!4.28e-25!172;CL:0000738!2.49e-23!140;CL:0000988!7.63e-23!182;CL:0000235!4.13e-08!10;CL:0002393!1.01e-07!9;CL:0002397!1.01e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.65e-59;6!CL:0000473;1.80e-29;39!CL:0000234;1.80e-29;39!CL:0002619;1.61e-14;3!CL:0000576;2.24e-10;48!CL:0000766;2.32e-10;69!CL:0000860;3.01e-09;33!CL:0002057;3.01e-09;33!CL:0000763;3.36e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.27e-59,6;CL:0002194,2.76e-30,59;CL:0000576,2.76e-30,59;CL:0000040,2.76e-30,59;CL:0000559,2.76e-30,59;CL:0002009,3.05e-29,61;CL:0000473,6.56e-28,48;CL:0000234,6.56e-28,48;CL:0000839,6.59e-27,66;CL:0000557,1.76e-26,67;CL:0000766,1.59e-24,72;CL:0000763,6.10e-21,108;CL:0000049,6.10e-21,108;CL:0002087,1.43e-19,115;CL:0002031,1.16e-18,120;CL:0002032,2.41e-17,161;CL:0000837,2.41e-17,161;CL:0000037,1.61e-16,168;CL:0000738,3.34e-16,136;CL:0000988,1.49e-15,177;CL:0002619,1.98e-14,3;CL:0000860,4.00e-08,42;CL:0002057,4.00e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000049;2.45e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;8.62e-12;1!DOID:0070004;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,8.62e-12,1;DOID:0070004,8.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.81e-40!80;UBERON:0001474!9.83e-37!86;UBERON:0002390!1.16e-33!102;UBERON:0003061!1.16e-33!102;UBERON:0004765!7.08e-31!101;UBERON:0001434!7.08e-31!101;UBERON:0002193!8.00e-31!112;UBERON:0002405!9.96e-27!115;UBERON:0002204!2.43e-15!167;UBERON:0003081!7.67e-12!216;UBERON:0007023!8.66e-12!115;UBERON:0000062!6.18e-08!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.60e-11;1!UBERON:0006518;1.60e-11;1!UBERON:0008949;1.60e-11;1!UBERON:0000101;1.60e-11;1!UBERON:0002167;1.60e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.85e-27,76;UBERON:0001474,9.87e-25,82;UBERON:0004765,2.31e-22,90;UBERON:0002405,1.41e-21,93;UBERON:0002390,2.25e-20,98;UBERON:0003061,2.25e-20,98;UBERON:0001434,6.31e-20,100;UBERON:0002193,2.69e-18,108;UBERON:0002171,1.06e-11,1;UBERON:0006518,1.06e-11,1;UBERON:0008949,1.06e-11,1;UBERON:0000101,1.06e-11,1;UBERON:0002167,1.06e-11,1;UBERON:0002204,4.69e-11,167;UBERON:0003081,1.11e-08,203;UBERON:0002384,5.79e-07,371 | |||
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|short_description=p@chr10:122509543..122509548,+ | |||
}} |
Revision as of 12:04, 10 September 2013
Short description: | p@chr10:122509543..122509548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:122509543..122509548, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.27e-59 | 6 |
monopoietic cell | 2.76e-30 | 59 |
monocyte | 2.76e-30 | 59 |
monoblast | 2.76e-30 | 59 |
promonocyte | 2.76e-30 | 59 |
macrophage dendritic cell progenitor | 3.05e-29 | 61 |
defensive cell | 6.56e-28 | 48 |
phagocyte | 6.56e-28 | 48 |
myeloid lineage restricted progenitor cell | 6.59e-27 | 66 |
granulocyte monocyte progenitor cell | 1.76e-26 | 67 |
myeloid leukocyte | 1.59e-24 | 72 |
myeloid cell | 6.10e-21 | 108 |
common myeloid progenitor | 6.10e-21 | 108 |
nongranular leukocyte | 1.43e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-18 | 120 |
hematopoietic oligopotent progenitor cell | 2.41e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-17 | 161 |
hematopoietic stem cell | 1.61e-16 | 168 |
leukocyte | 3.34e-16 | 136 |
hematopoietic cell | 1.49e-15 | 177 |
adult endothelial progenitor cell | 1.98e-14 | 3 |
classical monocyte | 4.00e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.00e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.85e-27 | 76 |
bone element | 9.87e-25 | 82 |
skeletal element | 2.31e-22 | 90 |
immune system | 1.41e-21 | 93 |
hematopoietic system | 2.25e-20 | 98 |
blood island | 2.25e-20 | 98 |
skeletal system | 6.31e-20 | 100 |
hemolymphoid system | 2.69e-18 | 108 |
lower lobe of right lung | 1.06e-11 | 1 |
right lung lobe | 1.06e-11 | 1 |
lower lobe of lung | 1.06e-11 | 1 |
lobe of lung | 1.06e-11 | 1 |
right lung | 1.06e-11 | 1 |
musculoskeletal system | 4.69e-11 | 167 |
lateral plate mesoderm | 1.11e-08 | 203 |
connective tissue | 5.79e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.62e-12 | 1 |
myeloma | 8.62e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.