FFCP PHASE1:Hg19::chr11:102651343..102651365,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4319|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7156|TSSclassifier=W|UniProt=P09238,F5GYX7|association_with_transcript=0bp_to_ENST00000279441,ENST00000539681,NM_002425,uc001phg.1_5end|coexpression_cluster_id=C556|description=CAGE_peak_1_at_MMP10_5end|id=chr11:102651343..102651365,-|ontology_enrichment_celltype=CL:0002139!1.58e-17!24;CL:0000071!1.41e-13!18;CL:0002546!1.41e-13!18;CL:0000115!7.84e-13!35;CL:0000220!5.55e-12!246;CL:0002321!1.37e-11!248;CL:0002076!8.71e-11!43;CL:0000066!2.43e-10!254;CL:0000223!2.06e-09!59;CL:0002078!2.11e-08!44;CL:1000413!1.52e-07!9|ontology_enrichment_celltype_v019=CL:0002139;1.65e-24;24!CL:0000071;8.72e-19;18!CL:0000115;6.70e-16;36!CL:1000413;3.52e-10;9!CL:0000860;8.54e-10;33!CL:0002057;8.54e-10;33!CL:0002076;1.85e-09;42!CL:0002078;6.55e-09;45!CL:0002544;1.39e-07;6!CL:0002368;2.76e-07;13!CL:0002138;2.86e-07;6!CL:0002543;5.69e-07;6|ontology_enrichment_celltype_v019_2=CL:0002139,1.65e-24,24;CL:0000071,8.01e-19,18;CL:0002546,8.01e-19,18;CL:0000115,9.42e-19,36;CL:0002078,4.51e-13,45;CL:0002076,3.59e-12,42;CL:0000066,1.52e-11,253;CL:0002321,1.16e-10,250;CL:1000413,3.66e-10,9;CL:0000076,3.76e-09,63;CL:0000223,6.99e-09,58;CL:0000213,7.32e-09,58;CL:0000215,7.32e-09,58;CL:0002544,1.41e-07,6;CL:0002368,2.69e-07,13;CL:0005020,3.11e-07,6;CL:0002138,3.11e-07,6;CL:0005022,3.11e-07,6;CL:0002543,4.97e-07,6;CL:0000860,6.22e-07,42;CL:0002057,6.22e-07,42|ontology_enrichment_development_v019=CL:0002546;8.72e-19;18!UBERON:0005795;5.50e-08;10!CL:0005022;2.86e-07;6|ontology_enrichment_disease=DOID:120!2.39e-09!27;DOID:193!4.06e-08!29;DOID:2394!1.26e-07!14|ontology_enrichment_disease_v019=DOID:120;6.71e-11;27!DOID:2394;1.68e-10;14!DOID:193;9.73e-10;29|ontology_enrichment_disease_v019_2=DOID:120,7.50e-11,27;DOID:2394,1.43e-10,14;DOID:193,1.08e-09,29|ontology_enrichment_uberon=UBERON:0000055!3.03e-18!69;UBERON:0001981!1.64e-16!60;UBERON:0007500!1.64e-16!60;UBERON:0004537!1.64e-16!60;UBERON:0006965!1.64e-16!60;UBERON:0004872!2.34e-16!84;UBERON:0000467!1.56e-15!625;UBERON:0000480!2.29e-15!626;UBERON:0000468!8.76e-15!659;UBERON:0002049!9.84e-14!79;UBERON:0007798!9.84e-14!79;UBERON:0001637!1.07e-13!42;UBERON:0003509!1.07e-13!42;UBERON:0004572!1.07e-13!42;UBERON:0001986!1.41e-13!18;UBERON:0004638!1.41e-13!18;UBERON:0004852!1.41e-13!18;UBERON:0000922!7.81e-12!612;UBERON:0000923!1.82e-11!604;UBERON:0005291!1.82e-11!604;UBERON:0006598!1.82e-11!604;UBERON:0002532!1.82e-11!604;UBERON:0002050!2.54e-11!605;UBERON:0005423!2.54e-11!605;UBERON:0003100!3.83e-11!41;UBERON:0004573!6.53e-11!33;UBERON:0004571!6.53e-11!33;UBERON:0000487!1.86e-10!22;UBERON:0003134!2.39e-10!37;UBERON:0000474!2.39e-10!37;UBERON:0003914!3.44e-10!118;UBERON:0004535!1.05e-09!110;UBERON:0000926!2.28e-09!448;UBERON:0004120!2.28e-09!448;UBERON:0006603!2.28e-09!448;UBERON:0001009!2.82e-09!113;UBERON:0000947!1.91e-08!21;UBERON:0010191!1.91e-08!21;UBERON:0006914!3.01e-08!25;UBERON:0003081!7.01e-08!216;UBERON:0003915!1.52e-07!9;UBERON:0004700!1.52e-07!9;UBERON:0001917!1.52e-07!9;UBERON:0000995!3.72e-07!21|ontology_enrichment_uberon_v019=UBERON:0004638;8.72e-19;18!UBERON:0001986;8.72e-19;18!UBERON:0004852;8.72e-19;18!UBERON:0000487;3.39e-14;22!UBERON:0000055;2.48e-13;65!UBERON:0001637;5.49e-12;42!UBERON:0003509;5.49e-12;42!UBERON:0004572;5.49e-12;42!UBERON:0007500;7.46e-12;56!UBERON:0001981;7.46e-12;56!UBERON:0004537;7.46e-12;56!UBERON:0006914;9.40e-12;25!UBERON:0004573;2.28e-10;33!UBERON:0004571;2.28e-10;33!UBERON:0003915;3.52e-10;9!UBERON:0004700;3.52e-10;9!UBERON:0001917;3.52e-10;9!UBERON:0000490;4.31e-10;33!UBERON:0000947;7.31e-10;21!UBERON:0010191;7.31e-10;21!UBERON:0002049;2.04e-08;75!UBERON:0007798;2.04e-08;75!UBERON:0000474;1.84e-07;37!UBERON:0003100;2.24e-07;41!UBERON:0003914;3.23e-07;74!UBERON:0003134;3.68e-07;33!UBERON:0000365;5.97e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.00e-22,68;UBERON:0007500,1.38e-19,59;UBERON:0001981,1.38e-19,59;UBERON:0004537,1.38e-19,59;UBERON:0006965,1.38e-19,59;UBERON:0004872,6.38e-19,83;UBERON:0004638,8.01e-19,18;UBERON:0001986,8.01e-19,18;UBERON:0004852,8.01e-19,18;UBERON:0002049,8.09e-18,78;UBERON:0007798,8.09e-18,78;UBERON:0001637,1.60e-14,42;UBERON:0003509,1.60e-14,42;UBERON:0004572,1.60e-14,42;UBERON:0000487,3.17e-14,22;UBERON:0004535,1.54e-13,109;UBERON:0001009,9.33e-13,112;UBERON:0006914,8.88e-12,25;UBERON:0004573,3.35e-11,33;UBERON:0004571,3.35e-11,33;UBERON:0003914,6.68e-11,117;UBERON:0003081,9.13e-11,203;UBERON:0003100,1.74e-10,41;UBERON:0003915,3.66e-10,9;UBERON:0004700,3.66e-10,9;UBERON:0001917,3.66e-10,9;UBERON:0000947,6.44e-10,21;UBERON:0010191,6.44e-10,21;UBERON:0000926,1.39e-09,315;UBERON:0004120,1.39e-09,315;UBERON:0006603,1.39e-09,315;UBERON:0005423,2.42e-09,581;UBERON:0003134,3.45e-09,37;UBERON:0000474,3.45e-09,37;UBERON:0000922,6.83e-09,592;UBERON:0002050,1.89e-08,564;UBERON:0000923,2.26e-07,560;UBERON:0010316,2.26e-07,560;UBERON:0005291,2.26e-07,560;UBERON:0006598,2.26e-07,560;UBERON:0010317,2.26e-07,560;UBER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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4319 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7156 | |||
|TSSclassifier=W | |||
|UniProt=P09238,F5GYX7 | |||
|association_with_transcript=0bp_to_ENST00000279441,ENST00000539681,NM_002425,uc001phg.1_5end | |||
|coexpression_cluster_id=C556 | |||
|description=CAGE_peak_1_at_MMP10_5end | |||
|id=chr11:102651343..102651365,- | |||
|ontology_enrichment_celltype=CL:0002139!1.58e-17!24;CL:0000071!1.41e-13!18;CL:0002546!1.41e-13!18;CL:0000115!7.84e-13!35;CL:0000220!5.55e-12!246;CL:0002321!1.37e-11!248;CL:0002076!8.71e-11!43;CL:0000066!2.43e-10!254;CL:0000223!2.06e-09!59;CL:0002078!2.11e-08!44;CL:1000413!1.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.65e-24;24!CL:0000071;8.72e-19;18!CL:0000115;6.70e-16;36!CL:1000413;3.52e-10;9!CL:0000860;8.54e-10;33!CL:0002057;8.54e-10;33!CL:0002076;1.85e-09;42!CL:0002078;6.55e-09;45!CL:0002544;1.39e-07;6!CL:0002368;2.76e-07;13!CL:0002138;2.86e-07;6!CL:0002543;5.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.65e-24,24;CL:0000071,8.01e-19,18;CL:0002546,8.01e-19,18;CL:0000115,9.42e-19,36;CL:0002078,4.51e-13,45;CL:0002076,3.59e-12,42;CL:0000066,1.52e-11,253;CL:0002321,1.16e-10,250;CL:1000413,3.66e-10,9;CL:0000076,3.76e-09,63;CL:0000223,6.99e-09,58;CL:0000213,7.32e-09,58;CL:0000215,7.32e-09,58;CL:0002544,1.41e-07,6;CL:0002368,2.69e-07,13;CL:0005020,3.11e-07,6;CL:0002138,3.11e-07,6;CL:0005022,3.11e-07,6;CL:0002543,4.97e-07,6;CL:0000860,6.22e-07,42;CL:0002057,6.22e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002546;8.72e-19;18!UBERON:0005795;5.50e-08;10!CL:0005022;2.86e-07;6 | |||
|ontology_enrichment_disease=DOID:120!2.39e-09!27;DOID:193!4.06e-08!29;DOID:2394!1.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:120;6.71e-11;27!DOID:2394;1.68e-10;14!DOID:193;9.73e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,7.50e-11,27;DOID:2394,1.43e-10,14;DOID:193,1.08e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.03e-18!69;UBERON:0001981!1.64e-16!60;UBERON:0007500!1.64e-16!60;UBERON:0004537!1.64e-16!60;UBERON:0006965!1.64e-16!60;UBERON:0004872!2.34e-16!84;UBERON:0000467!1.56e-15!625;UBERON:0000480!2.29e-15!626;UBERON:0000468!8.76e-15!659;UBERON:0002049!9.84e-14!79;UBERON:0007798!9.84e-14!79;UBERON:0001637!1.07e-13!42;UBERON:0003509!1.07e-13!42;UBERON:0004572!1.07e-13!42;UBERON:0001986!1.41e-13!18;UBERON:0004638!1.41e-13!18;UBERON:0004852!1.41e-13!18;UBERON:0000922!7.81e-12!612;UBERON:0000923!1.82e-11!604;UBERON:0005291!1.82e-11!604;UBERON:0006598!1.82e-11!604;UBERON:0002532!1.82e-11!604;UBERON:0002050!2.54e-11!605;UBERON:0005423!2.54e-11!605;UBERON:0003100!3.83e-11!41;UBERON:0004573!6.53e-11!33;UBERON:0004571!6.53e-11!33;UBERON:0000487!1.86e-10!22;UBERON:0003134!2.39e-10!37;UBERON:0000474!2.39e-10!37;UBERON:0003914!3.44e-10!118;UBERON:0004535!1.05e-09!110;UBERON:0000926!2.28e-09!448;UBERON:0004120!2.28e-09!448;UBERON:0006603!2.28e-09!448;UBERON:0001009!2.82e-09!113;UBERON:0000947!1.91e-08!21;UBERON:0010191!1.91e-08!21;UBERON:0006914!3.01e-08!25;UBERON:0003081!7.01e-08!216;UBERON:0003915!1.52e-07!9;UBERON:0004700!1.52e-07!9;UBERON:0001917!1.52e-07!9;UBERON:0000995!3.72e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.72e-19;18!UBERON:0001986;8.72e-19;18!UBERON:0004852;8.72e-19;18!UBERON:0000487;3.39e-14;22!UBERON:0000055;2.48e-13;65!UBERON:0001637;5.49e-12;42!UBERON:0003509;5.49e-12;42!UBERON:0004572;5.49e-12;42!UBERON:0007500;7.46e-12;56!UBERON:0001981;7.46e-12;56!UBERON:0004537;7.46e-12;56!UBERON:0006914;9.40e-12;25!UBERON:0004573;2.28e-10;33!UBERON:0004571;2.28e-10;33!UBERON:0003915;3.52e-10;9!UBERON:0004700;3.52e-10;9!UBERON:0001917;3.52e-10;9!UBERON:0000490;4.31e-10;33!UBERON:0000947;7.31e-10;21!UBERON:0010191;7.31e-10;21!UBERON:0002049;2.04e-08;75!UBERON:0007798;2.04e-08;75!UBERON:0000474;1.84e-07;37!UBERON:0003100;2.24e-07;41!UBERON:0003914;3.23e-07;74!UBERON:0003134;3.68e-07;33!UBERON:0000365;5.97e-07;5 | |||
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| |||
|short_description=p1@MMP10 | |||
}} |
Revision as of 15:22, 10 September 2013
Short description: | p1@MMP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MMP10_5end |
Coexpression cluster: | C556_pharyngeal_Gingival_Retinal_lung_Mallassezderived_Small_mesothelioma |
Association with transcript: | 0bp_to_ENST00000279441, ENST00000539681, NM_002425, uc001phg.1_5end |
EntrezGene: | MMP10 |
HGNC: | 7156 |
UniProt: | P09238F5GYX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.65e-24 | 24 |
blood vessel endothelial cell | 8.01e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.01e-19 | 18 |
endothelial cell | 9.42e-19 | 36 |
meso-epithelial cell | 4.51e-13 | 45 |
endo-epithelial cell | 3.59e-12 | 42 |
epithelial cell | 1.52e-11 | 253 |
embryonic cell | 1.16e-10 | 250 |
endothelial cell of artery | 3.66e-10 | 9 |
squamous epithelial cell | 3.76e-09 | 63 |
endodermal cell | 6.99e-09 | 58 |
lining cell | 7.32e-09 | 58 |
barrier cell | 7.32e-09 | 58 |
aortic endothelial cell | 1.41e-07 | 6 |
respiratory epithelial cell | 2.69e-07 | 13 |
lymphangioblast | 3.11e-07 | 6 |
endothelial cell of lymphatic vessel | 3.11e-07 | 6 |
vascular lymphangioblast | 3.11e-07 | 6 |
vein endothelial cell | 4.97e-07 | 6 |
classical monocyte | 6.22e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.22e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 7.50e-11 | 27 |
ovarian cancer | 1.43e-10 | 14 |
reproductive organ cancer | 1.08e-09 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.