FFCP PHASE1:Hg19::chr11:118402476..118402498,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25890|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc001ptn.2_5end|description=CAGE_peak_6_at_TMEM25_5end|id=chr11:118402476..118402498,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002537;8.39e-15;5!CL:0000349;3.71e-14;19!CL:0002577;3.08e-07;3!CL:0002541;7.12e-07;3|ontology_enrichment_celltype_v019_2=CL:0002537,1.19e-14,5;CL:0000349,5.28e-14,19;CL:0002577,3.23e-07,3;CL:0002541,9.07e-07,3|ontology_enrichment_development_v019=UBERON:0006601;7.00e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.59e-38!115;UBERON:0001049!3.12e-29!57;UBERON:0005068!3.12e-29!57;UBERON:0006241!3.12e-29!57;UBERON:0007135!3.12e-29!57;UBERON:0002616!2.26e-26!59;UBERON:0002780!1.29e-25!41;UBERON:0001890!1.29e-25!41;UBERON:0006240!1.29e-25!41;UBERON:0001893!3.20e-25!34;UBERON:0002020!7.82e-25!34;UBERON:0003528!7.82e-25!34;UBERON:0003080!1.01e-24!42;UBERON:0002791!4.47e-24!33;UBERON:0001869!6.61e-24!32;UBERON:0000955!7.79e-24!69;UBERON:0006238!7.79e-24!69;UBERON:0005743!2.39e-23!86;UBERON:0001017!5.81e-23!82;UBERON:0003075!6.31e-22!86;UBERON:0007284!6.31e-22!86;UBERON:0002619!1.16e-21!22;UBERON:0002346!3.82e-21!90;UBERON:0000073!2.09e-20!94;UBERON:0001016!2.09e-20!94;UBERON:0001950!1.55e-19!20;UBERON:0000153!5.06e-19!129;UBERON:0007811!5.06e-19!129;UBERON:0003056!2.19e-18!61;UBERON:0000956!3.16e-18!25;UBERON:0000203!3.16e-18!25;UBERON:0000033!1.50e-17!123;UBERON:0004121!3.06e-17!169;UBERON:0000924!5.62e-17!173;UBERON:0006601!5.62e-17!173;UBERON:0005631!3.47e-13!14;UBERON:0000158!3.47e-13!14;UBERON:0000064!1.54e-10!219;UBERON:0001871!2.91e-10!7;UBERON:0002420!7.86e-09!9;UBERON:0007245!7.86e-09!9;UBERON:0010009!7.86e-09!9;UBERON:0010011!7.86e-09!9;UBERON:0000454!7.86e-09!9;UBERON:0000062!1.28e-08!511;UBERON:0003124!1.61e-08!7;UBERON:0004111!3.12e-08!241;UBERON:0000200!3.42e-08!6;UBERON:0002308!4.68e-08!9;UBERON:0000125!4.68e-08!9;UBERON:0000478!5.88e-08!24;UBERON:0000025!1.22e-07!194;UBERON:0000477!1.31e-07!286;UBERON:0000483!1.34e-07!309;UBERON:0000481!1.97e-07!347;UBERON:0000349!2.48e-07!5;UBERON:0000119!2.55e-07!312;UBERON:0000468!7.58e-07!659;UBERON:0004733!9.56e-07!12;UBERON:0002028!9.56e-07!12;UBERON:0007277!9.56e-07!12;UBERON:0000922!1.00e-06!612|ontology_enrichment_uberon_v019=UBERON:0001869;1.89e-45;32!UBERON:0001893;1.81e-42;34!UBERON:0002619;1.63e-41;22!UBERON:0002791;2.49e-41;32!UBERON:0001950;7.51e-40;20!UBERON:0003528;8.95e-39;34!UBERON:0002020;8.95e-39;34!UBERON:0000956;2.49e-36;25!UBERON:0000203;2.49e-36;25!UBERON:0002780;2.96e-28;41!UBERON:0001890;2.96e-28;41!UBERON:0001871;3.34e-23;6!UBERON:0002420;3.53e-18;9!UBERON:0007245;3.53e-18;9!UBERON:0010009;3.53e-18;9!UBERON:0010011;3.53e-18;9!UBERON:0000454;3.53e-18;9!UBERON:0005631;9.39e-16;10!UBERON:0000158;9.39e-16;10!UBERON:0000073;1.60e-15;53!UBERON:0002616;1.60e-15;53!UBERON:0000349;8.39e-15;5!UBERON:0000955;1.82e-14;68!UBERON:0001017;2.04e-13;75!UBERON:0000200;1.30e-12;6!UBERON:0000369;1.27e-11;4!UBERON:0002435;1.27e-11;4!UBERON:0000204;1.27e-11;4!UBERON:0009663;3.91e-11;7!UBERON:0000478;6.02e-11;24!UBERON:0000305;1.31e-10;7!UBERON:0001016;4.49e-10;83!UBERON:0002771;6.67e-10;2!UBERON:0001876;6.67e-10;2!UBERON:0007023;1.09e-09;114!UBERON:0002108;2.03e-09;4!UBERON:0002021;3.60e-09;5!UBERON:0001872;8.06e-09;5!UBERON:0000125;1.14e-08;9!UBERON:0002308;1.14e-08;9!UBERON:0005383;1.67e-07;3!UBERON:0005382;1.67e-07;3!UBERON:0011216;4.38e-07;132!UBERON:0003124;7.12e-07;3!UBERON:0000920;7.12e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.66e-51,32;UBERON:0001893,2.73e-48,34;UBERON:0002791,3.11e-46,32;UBERON:0003528,2.47e-43,34;UBERON:0002020,2.47e-43,34;UBERON:0002619,1.13e-41,22;UBERON:0001950,5.56e-40,20;UBERON:0002780,1.91e-39,41;UBERON:0001890,1.91e-39,41;UBERON:0003080,1.91e-39,41;UBERON:0006240,1.91e-39,41;UBERON:0000956,1.80e-36,25;UBERON:0000203,1.80e-36,25;UBERON:0000073,1.27e-29,53;UBERON:0002616,1.27e-29,53;UBERON:0007023,1.45e-29,114;UBERON:0001049,8.18e-28,56;UBERON:0005068,8.18e-28,56;UBERON:0006241,8.18e-28,56;UBERON:0007135,8.18e-28,56;UBERON:0000955,6.00e-27,68;UBERON:0006238,6.00e-27,68;UBERON:0003056,3.45e-25,61;UBERON:0001017,3.74e-24,81;UBERON:0001871,2.77e-23,6;UBERON:0001016,2.92e-21,89;UBERON:0005631,1.90e-19,14;UBERON:0000158,1.90e-19,14;UBERON:0002420,2.22e-18,9;UBERON:0007245,2.22e-18,9;UBERON:0010009,2.22e-18,9;UBERON:0010011,2.22e-18,9;UBERON:0000454,2.22e-18,9;UBERON:0003075,1.26e-17,82;UBERON:0007284,1.26e-17,82;UBERON:0004121,4.03e-17,171;UBERON:0000924,4.03e-17,171;UBERON:0006601,4.03e-17,171;UBERON:0002346,1.33e-16,86;UBERON:0000349,3.21e-15,5;UBERON:0010371,1.57e-14,104;UBERON:0011216,7.90e-13,223;UBERON:0000200,2.53e-12,6;UBERON:0000369,1.15e-11,4;UBERON:0002435,1.15e-11,4;UBERON:0000204,1.15e-11,4;UBERON:0010082,1.15e-11,4;UBERON:0010314,1.29e-11,132;UBERON:0009663,4.30e-11,7;UBERON:0000478,7.90e-11,24;UBERON:0003124,1.37e-10,7;UBERON:0000305,1.68e-10,7;UBERON:0001876,2.79e-10,2;UBERON:0002771,1.10e-09,2;UBERON:0002108,2.22e-09,4;UBERON:0004871,3.35e-09,8;UBERON:0002021,4.20e-09,5;UBERON:0001872,9.01e-09,5;UBERON:0000125,1.22e-08,9;UBERON:0002308,1.22e-08,9;UBERON:0005383,1.78e-07,3;UBERON:0005382,1.78e-07,3;UBERON:0000920,9.07e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0.606255142892519,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,1.18785872333055,2.45728561679386,1.9882952955326,1.68803299692615,0,0,0,0.597743964753209,0.276283915531148,0.503865495708552,0.102268682502155,0,0,0,0,0,0.394573622547734,0,0,0,2.41197055220813,1.99613798001194,0,1.83665999992011,0,0,0.254253650292766,2.36387681767936,0,0,0,0.885741385813839,2.29133233388275,0,0.110579259931225,0.295547618953547,1.53569778007781,0,0,0,0,0,0.448788222048861,0.217294743844016,1.5950057986596,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,2.83064206410685,0.611030144933625,0,0.123563938946503,0,0.337005664903385,0,0.234264445725339,0,0,0,0,3.62972148145992,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0.694238953340524,0,0,0.34945333648406,0.343972064943233,0,0,0,0.581934098930517,0.353024506766001,0.225980740780532,0,0,1.64608069485285,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0.429765441419957,0,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0,0,0,0.393915911536118,0,0.26961417541674,0,0.0846733320657845,1.59045937961861,0.681017030557878,0.160753148465019,0,0,0,0,1.76173714308272,0,1.41850273138557,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,0.625954653532499,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,2.82608590424422,4.25089728976755,0,1.43581454968528,0.504143392443436,2.28218933131919,1.29180516505481,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0.163771917510097,0,2.09366512317023,1.56215619722769,0.413373593002368,1.52197944465376,0,1.64477330057155,0,0.175871244359621,0,0,0.336283722218824,0.606965604236632,0,0.443511850813194,0,0,0.475788130837822,2.10472875401117,0,0.111231401892069,0.235479278551542,3.29942738823604,0,0,0,0,0.357382720883282,0,0,0,0,0,0.17071847709395,0,1.72090943528111,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.452888530700021,2.31522474323834,6.1196676941108,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0,2.10773619591836,0.436350690340377,2.1161073620616,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,0.227336094654718,0,0,0.517164979309476,0.639701945702943,0.476128862927481,0.0645889098360061,0.124149428591716,0.112131862580613,1.0820016907288,0.404234377916439,0,0.684466602170562,0.404112318087525,0.502055437748735,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0.641136984606466|short_description=p6@TMEM25}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25890 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001ptn.2_5end | |||
|description=CAGE_peak_6_at_TMEM25_5end | |||
|id=chr11:118402476..118402498,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;8.39e-15;5!CL:0000349;3.71e-14;19!CL:0002577;3.08e-07;3!CL:0002541;7.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.19e-14,5;CL:0000349,5.28e-14,19;CL:0002577,3.23e-07,3;CL:0002541,9.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.00e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.59e-38!115;UBERON:0001049!3.12e-29!57;UBERON:0005068!3.12e-29!57;UBERON:0006241!3.12e-29!57;UBERON:0007135!3.12e-29!57;UBERON:0002616!2.26e-26!59;UBERON:0002780!1.29e-25!41;UBERON:0001890!1.29e-25!41;UBERON:0006240!1.29e-25!41;UBERON:0001893!3.20e-25!34;UBERON:0002020!7.82e-25!34;UBERON:0003528!7.82e-25!34;UBERON:0003080!1.01e-24!42;UBERON:0002791!4.47e-24!33;UBERON:0001869!6.61e-24!32;UBERON:0000955!7.79e-24!69;UBERON:0006238!7.79e-24!69;UBERON:0005743!2.39e-23!86;UBERON:0001017!5.81e-23!82;UBERON:0003075!6.31e-22!86;UBERON:0007284!6.31e-22!86;UBERON:0002619!1.16e-21!22;UBERON:0002346!3.82e-21!90;UBERON:0000073!2.09e-20!94;UBERON:0001016!2.09e-20!94;UBERON:0001950!1.55e-19!20;UBERON:0000153!5.06e-19!129;UBERON:0007811!5.06e-19!129;UBERON:0003056!2.19e-18!61;UBERON:0000956!3.16e-18!25;UBERON:0000203!3.16e-18!25;UBERON:0000033!1.50e-17!123;UBERON:0004121!3.06e-17!169;UBERON:0000924!5.62e-17!173;UBERON:0006601!5.62e-17!173;UBERON:0005631!3.47e-13!14;UBERON:0000158!3.47e-13!14;UBERON:0000064!1.54e-10!219;UBERON:0001871!2.91e-10!7;UBERON:0002420!7.86e-09!9;UBERON:0007245!7.86e-09!9;UBERON:0010009!7.86e-09!9;UBERON:0010011!7.86e-09!9;UBERON:0000454!7.86e-09!9;UBERON:0000062!1.28e-08!511;UBERON:0003124!1.61e-08!7;UBERON:0004111!3.12e-08!241;UBERON:0000200!3.42e-08!6;UBERON:0002308!4.68e-08!9;UBERON:0000125!4.68e-08!9;UBERON:0000478!5.88e-08!24;UBERON:0000025!1.22e-07!194;UBERON:0000477!1.31e-07!286;UBERON:0000483!1.34e-07!309;UBERON:0000481!1.97e-07!347;UBERON:0000349!2.48e-07!5;UBERON:0000119!2.55e-07!312;UBERON:0000468!7.58e-07!659;UBERON:0004733!9.56e-07!12;UBERON:0002028!9.56e-07!12;UBERON:0007277!9.56e-07!12;UBERON:0000922!1.00e-06!612 | |||
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|short_description=p6@TMEM25 | |||
}} |
Revision as of 16:02, 10 September 2013
Short description: | p6@TMEM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TMEM25_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ptn.2_5end |
EntrezGene: | TMEM25 |
HGNC: | 25890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.19e-14 | 5 |
extraembryonic cell | 5.28e-14 | 19 |
placental epithelial cell | 3.23e-07 | 3 |
chorionic membrane mesenchymal stem cell | 9.07e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.