FFCP PHASE1:Hg19::chr11:61522820..61522823,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1181|TSSclassifier=S|UniProt=Q9Y2G1|association_with_transcript=-37bp_to_ENST00000265460,NM_013279,uc001nse.1_5end|coexpression_cluster_id=C789|description=CAGE_peak_9_at_C11orf9_5end|id=chr11:61522820..61522823,+|ontology_enrichment_celltype=CL:0002586!7.56e-39!3;CL:0000149!2.47e-29!4;CL:0000147!8.16e-09!14;CL:0000632!1.20e-07!2|ontology_enrichment_celltype_v019=CL:0002586;6.24e-88;3!CL:0000149;2.40e-66;4!CL:0000147;5.89e-20;14|ontology_enrichment_celltype_v019_2=CL:0002586,6.24e-88,3;CL:0000149,2.40e-66,4;CL:0000147,5.89e-20,14|ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000966!5.16e-41!5;UBERON:0005388!5.16e-41!5;UBERON:0001802!5.16e-41!5;UBERON:0001781!7.56e-39!3;UBERON:0001782!7.56e-39!3;UBERON:0005424!7.56e-39!3;UBERON:0000970!7.06e-16!20;UBERON:0002104!4.03e-15!21;UBERON:0000020!8.36e-14!23;UBERON:0007190!1.61e-13!1;UBERON:0001032!3.15e-13!24;UBERON:0004456!3.15e-13!24;UBERON:0007625!4.50e-11!11;UBERON:0000019!4.92e-11!19;UBERON:0000047!4.92e-11!19;UBERON:0004088!4.92e-11!19;UBERON:0003072!4.92e-11!19;UBERON:0003071!4.92e-11!19;UBERON:0004128!4.92e-11!19;UBERON:0003075!1.41e-10!86;UBERON:0007284!1.41e-10!86;UBERON:0005743!1.91e-10!86;UBERON:0002346!4.58e-10!90;UBERON:0001456!5.27e-10!21;UBERON:0000073!2.23e-09!94;UBERON:0001016!2.23e-09!94;UBERON:0003056!2.72e-09!61;UBERON:0002148!1.87e-07!2;UBERON:0009662!1.87e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0005085!2.70e-07!29|ontology_enrichment_uberon_v019=UBERON:0000966;7.76e-118;5!UBERON:0005388;7.76e-118;5!UBERON:0001802;7.76e-118;5!UBERON:0001781;6.24e-88;3!UBERON:0001782;6.24e-88;3!UBERON:0000019;4.52e-32;19!UBERON:0000047;4.52e-32;19!UBERON:0004088;4.52e-32;19!UBERON:0010230;4.52e-32;19!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0001456;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0007625;4.86e-25;11!UBERON:0000033;5.67e-13;50!UBERON:0001444;3.14e-11;48!UBERON:0010371;5.96e-10;31!UBERON:0007811;1.03e-09;52!UBERON:0000153;5.35e-09;54|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.83e-98,6;UBERON:0005388,1.83e-98,6;UBERON:0001802,1.83e-98,6;UBERON:0001782,6.24e-88,3;UBERON:0005424,6.24e-88,3;UBERON:0001781,2.40e-66,4;UBERON:0000019,1.56e-30,20;UBERON:0000047,1.56e-30,20;UBERON:0010312,1.56e-30,20;UBERON:0004088,1.56e-30,20;UBERON:0010230,1.56e-30,20;UBERON:0003072,1.56e-30,20;UBERON:0004128,1.56e-30,20;UBERON:0003071,1.56e-30,20;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0001456,7.08e-28,22;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0007625,4.86e-25,11;UBERON:0005085,3.79e-20,31;UBERON:0001444,3.57e-13,49;UBERON:0000033,1.15e-11,56;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0003056,1.22e-10,61;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,2.62411716559765,3.90454073597164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1181 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2G1 | |||
|association_with_transcript=-37bp_to_ENST00000265460,NM_013279,uc001nse.1_5end | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_9_at_C11orf9_5end | |||
|id=chr11:61522820..61522823,+ | |||
|ontology_enrichment_celltype=CL:0002586!7.56e-39!3;CL:0000149!2.47e-29!4;CL:0000147!8.16e-09!14;CL:0000632!1.20e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.24e-88;3!CL:0000149;2.40e-66;4!CL:0000147;5.89e-20;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.24e-88,3;CL:0000149,2.40e-66,4;CL:0000147,5.89e-20,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!5.16e-41!5;UBERON:0005388!5.16e-41!5;UBERON:0001802!5.16e-41!5;UBERON:0001781!7.56e-39!3;UBERON:0001782!7.56e-39!3;UBERON:0005424!7.56e-39!3;UBERON:0000970!7.06e-16!20;UBERON:0002104!4.03e-15!21;UBERON:0000020!8.36e-14!23;UBERON:0007190!1.61e-13!1;UBERON:0001032!3.15e-13!24;UBERON:0004456!3.15e-13!24;UBERON:0007625!4.50e-11!11;UBERON:0000019!4.92e-11!19;UBERON:0000047!4.92e-11!19;UBERON:0004088!4.92e-11!19;UBERON:0003072!4.92e-11!19;UBERON:0003071!4.92e-11!19;UBERON:0004128!4.92e-11!19;UBERON:0003075!1.41e-10!86;UBERON:0007284!1.41e-10!86;UBERON:0005743!1.91e-10!86;UBERON:0002346!4.58e-10!90;UBERON:0001456!5.27e-10!21;UBERON:0000073!2.23e-09!94;UBERON:0001016!2.23e-09!94;UBERON:0003056!2.72e-09!61;UBERON:0002148!1.87e-07!2;UBERON:0009662!1.87e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0005085!2.70e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;7.76e-118;5!UBERON:0005388;7.76e-118;5!UBERON:0001802;7.76e-118;5!UBERON:0001781;6.24e-88;3!UBERON:0001782;6.24e-88;3!UBERON:0000019;4.52e-32;19!UBERON:0000047;4.52e-32;19!UBERON:0004088;4.52e-32;19!UBERON:0010230;4.52e-32;19!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0001456;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0007625;4.86e-25;11!UBERON:0000033;5.67e-13;50!UBERON:0001444;3.14e-11;48!UBERON:0010371;5.96e-10;31!UBERON:0007811;1.03e-09;52!UBERON:0000153;5.35e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.83e-98,6;UBERON:0005388,1.83e-98,6;UBERON:0001802,1.83e-98,6;UBERON:0001782,6.24e-88,3;UBERON:0005424,6.24e-88,3;UBERON:0001781,2.40e-66,4;UBERON:0000019,1.56e-30,20;UBERON:0000047,1.56e-30,20;UBERON:0010312,1.56e-30,20;UBERON:0004088,1.56e-30,20;UBERON:0010230,1.56e-30,20;UBERON:0003072,1.56e-30,20;UBERON:0004128,1.56e-30,20;UBERON:0003071,1.56e-30,20;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0001456,7.08e-28,22;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0007625,4.86e-25,11;UBERON:0005085,3.79e-20,31;UBERON:0001444,3.57e-13,49;UBERON:0000033,1.15e-11,56;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0003056,1.22e-10,61;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,2.62411716559765,3.90454073597164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@C11orf9 | |||
}} |
Revision as of 18:24, 10 September 2013
Short description: | p9@C11orf9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_C11orf9_5end |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | -37bp_to_ENST00000265460, NM_013279, uc001nse.1_5end |
EntrezGene: | C11orf9 |
HGNC: | 1181 |
UniProt: | Q9Y2G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.24e-88 | 3 |
visual pigment cell | 2.40e-66 | 4 |
pigment cell | 5.89e-20 | 14 |
Ontology term | p-value | n |
---|---|---|
retina | 1.83e-98 | 6 |
photoreceptor array | 1.83e-98 | 6 |
posterior segment of eyeball | 1.83e-98 | 6 |
pigmented layer of retina | 6.24e-88 | 3 |
presumptive retinal pigmented epithelium | 6.24e-88 | 3 |
layer of retina | 2.40e-66 | 4 |
camera-type eye | 1.56e-30 | 20 |
simple eye | 1.56e-30 | 20 |
immature eye | 1.56e-30 | 20 |
ocular region | 1.56e-30 | 20 |
eyeball of camera-type eye | 1.56e-30 | 20 |
optic cup | 1.56e-30 | 20 |
optic vesicle | 1.56e-30 | 20 |
eye primordium | 1.56e-30 | 20 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
face | 7.08e-28 | 22 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
pigment epithelium of eye | 4.86e-25 | 11 |
ectodermal placode | 3.79e-20 | 31 |
subdivision of head | 3.57e-13 | 49 |
head | 1.15e-11 | 56 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
pre-chordal neural plate | 1.22e-10 | 61 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.