FFCP PHASE1:Hg19::chr11:64570392..64570409,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5871|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6864|TSSclassifier=S|UniProt=|association_with_transcript=72bp_to_ENST00000482314_5end|description=CAGE_peak_5_at_MAP4K2_5end|id=chr11:64570392..64570409,-|ontology_enrichment_celltype=CL:0000115!2.08e-13!35;CL:0002139!7.20e-12!24;CL:0000542!1.26e-10!53;CL:0000051!1.26e-10!53;CL:0000838!2.88e-10!52;CL:0000071!4.64e-10!18;CL:0002546!4.64e-10!18;CL:0002078!4.71e-09!44;CL:0002087!3.35e-08!119;CL:0000037!5.91e-08!172;CL:0000566!5.91e-08!172;CL:0000988!6.28e-08!182;CL:0002032!6.40e-08!165;CL:0000837!6.40e-08!165;CL:0000738!1.84e-07!140|ontology_enrichment_celltype_v019=CL:0002188;3.14e-13;5!CL:0000115;3.82e-13;36!CL:0002543;2.49e-11;6!CL:1000746;1.82e-09;7!CL:1000612;1.82e-09;7!CL:0002262;2.45e-09;2!CL:1000398;2.45e-09;2!CL:0000071;9.84e-08;18!CL:0002078;1.15e-07;45!CL:0002139;1.73e-07;24|ontology_enrichment_celltype_v019_2=CL:0000115,2.29e-16,36;CL:0002188,4.32e-13,5;CL:0002078,1.65e-12,45;CL:0002543,2.22e-11,6;CL:1000746,2.27e-09,7;CL:1000612,2.27e-09,7;CL:0002262,2.33e-09,2;CL:1000398,2.33e-09,2;CL:0000213,4.54e-09,58;CL:0000215,4.54e-09,58;CL:0000838,1.49e-08,52;CL:0000542,2.40e-08,53;CL:0000051,2.40e-08,53;CL:0000071,8.51e-08,18;CL:0002546,8.51e-08,18;CL:0002139,1.53e-07,24|ontology_enrichment_development_v019=CL:0002546;9.84e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!4.64e-10!18;UBERON:0004638!4.64e-10!18;UBERON:0004852!4.64e-10!18;UBERON:0000487!3.76e-08!22;UBERON:0004535!9.44e-08!110;UBERON:0001009!4.18e-07!113;UBERON:0002049!5.10e-07!79;UBERON:0007798!5.10e-07!79;UBERON:0000055!8.05e-07!69|ontology_enrichment_uberon_v019=UBERON:0000074;1.82e-09;7!UBERON:0001229;1.82e-09;7!UBERON:0001281;2.45e-09;2!UBERON:0003497;2.45e-09;2!UBERON:0003909;2.45e-09;2!UBERON:0003835;2.45e-09;2!UBERON:0000353;2.99e-09;15!UBERON:0004638;9.84e-08;18!UBERON:0001986;9.84e-08;18!UBERON:0004852;9.84e-08;18!UBERON:0001638;1.47e-07;9!UBERON:0003920;1.47e-07;9!UBERON:0004582;1.47e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.27e-09,7;UBERON:0000074,2.27e-09,7;UBERON:0001229,2.27e-09,7;UBERON:0001230,2.27e-09,7;UBERON:0003220,2.27e-09,7;UBERON:0005749,2.27e-09,7;UBERON:0004199,2.27e-09,7;UBERON:0004209,2.27e-09,7;UBERON:0004198,2.27e-09,7;UBERON:0001281,2.33e-09,2;UBERON:0003497,2.33e-09,2;UBERON:0003909,2.33e-09,2;UBERON:0003835,2.33e-09,2;UBERON:0000353,3.41e-09,15;UBERON:0003887,2.83e-08,12;UBERON:0005103,3.33e-08,8;UBERON:0000083,3.33e-08,8;UBERON:0009201,3.33e-08,8;UBERON:0006553,3.33e-08,8;UBERON:0003074,3.33e-08,8;UBERON:0003060,3.33e-08,8;UBERON:0004638,8.51e-08,18;UBERON:0001986,8.51e-08,18;UBERON:0004852,8.51e-08,18;UBERON:0001638,1.36e-07,9;UBERON:0003920,1.36e-07,9;UBERON:0004582,1.36e-07,9;UBERON:0000080,2.70e-07,9;UBERON:0002120,2.70e-07,9;UBERON:0004875,2.70e-07,9;UBERON:0005721,2.70e-07,9;UBERON:0005754,2.70e-07,9;UBERON:0007297,2.70e-07,9;UBERON:0000058,4.06e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0,0,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,1.83392173795083,1.64201178899891,2.04648031415566,0,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0.142169232487422,0.587200878669695,0,0.601633342410425,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0,0,0.633765858935825,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.79566670879636,0.182664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0,1.72425731986345,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,1.68152568894461,0,0.196709770113833,0,0.822405995998037,2.34061093546949,1.30368906653436,0.473447805734733,0,1.89397776704795,0.589211814949674,0.221533894583621,0.812411591295047,0.768547918354051,0.910415432919148,1.47994114143309,1.38175008892924,0.869409257205157,0.444859689486181,0.535081656179426,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,1.26509846009751,0,1.30216690771284,0,0.150575119077773,0.127986611154418,1.24930726552346,0.710331756132051,1.64225599384209,0.403213486449465,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0.364295288292542,0,0.324547393654683,0.174129737299267,1.32957960518865,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,0,0.550236083880135,0.626984899610432,0.516833518338658,0.71153252537342,1.33888245105868,0.805658634218294,1.52054421143703,0.732186172644509,0.367663080345869,2.43042584364528,1.25019619597712,0.673588117878509,0.675668882899933,1.53316637465883,2.84779697870439,2.74802615895611,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.908144565869588,0.57617592447999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587182052,0.961705476909699|short_description=p5@MAP4K2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6864 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=72bp_to_ENST00000482314_5end | |||
|description=CAGE_peak_5_at_MAP4K2_5end | |||
|id=chr11:64570392..64570409,- | |||
|ontology_enrichment_celltype=CL:0000115!2.08e-13!35;CL:0002139!7.20e-12!24;CL:0000542!1.26e-10!53;CL:0000051!1.26e-10!53;CL:0000838!2.88e-10!52;CL:0000071!4.64e-10!18;CL:0002546!4.64e-10!18;CL:0002078!4.71e-09!44;CL:0002087!3.35e-08!119;CL:0000037!5.91e-08!172;CL:0000566!5.91e-08!172;CL:0000988!6.28e-08!182;CL:0002032!6.40e-08!165;CL:0000837!6.40e-08!165;CL:0000738!1.84e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002188;3.14e-13;5!CL:0000115;3.82e-13;36!CL:0002543;2.49e-11;6!CL:1000746;1.82e-09;7!CL:1000612;1.82e-09;7!CL:0002262;2.45e-09;2!CL:1000398;2.45e-09;2!CL:0000071;9.84e-08;18!CL:0002078;1.15e-07;45!CL:0002139;1.73e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.29e-16,36;CL:0002188,4.32e-13,5;CL:0002078,1.65e-12,45;CL:0002543,2.22e-11,6;CL:1000746,2.27e-09,7;CL:1000612,2.27e-09,7;CL:0002262,2.33e-09,2;CL:1000398,2.33e-09,2;CL:0000213,4.54e-09,58;CL:0000215,4.54e-09,58;CL:0000838,1.49e-08,52;CL:0000542,2.40e-08,53;CL:0000051,2.40e-08,53;CL:0000071,8.51e-08,18;CL:0002546,8.51e-08,18;CL:0002139,1.53e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;9.84e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.64e-10!18;UBERON:0004638!4.64e-10!18;UBERON:0004852!4.64e-10!18;UBERON:0000487!3.76e-08!22;UBERON:0004535!9.44e-08!110;UBERON:0001009!4.18e-07!113;UBERON:0002049!5.10e-07!79;UBERON:0007798!5.10e-07!79;UBERON:0000055!8.05e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.82e-09;7!UBERON:0001229;1.82e-09;7!UBERON:0001281;2.45e-09;2!UBERON:0003497;2.45e-09;2!UBERON:0003909;2.45e-09;2!UBERON:0003835;2.45e-09;2!UBERON:0000353;2.99e-09;15!UBERON:0004638;9.84e-08;18!UBERON:0001986;9.84e-08;18!UBERON:0004852;9.84e-08;18!UBERON:0001638;1.47e-07;9!UBERON:0003920;1.47e-07;9!UBERON:0004582;1.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.27e-09,7;UBERON:0000074,2.27e-09,7;UBERON:0001229,2.27e-09,7;UBERON:0001230,2.27e-09,7;UBERON:0003220,2.27e-09,7;UBERON:0005749,2.27e-09,7;UBERON:0004199,2.27e-09,7;UBERON:0004209,2.27e-09,7;UBERON:0004198,2.27e-09,7;UBERON:0001281,2.33e-09,2;UBERON:0003497,2.33e-09,2;UBERON:0003909,2.33e-09,2;UBERON:0003835,2.33e-09,2;UBERON:0000353,3.41e-09,15;UBERON:0003887,2.83e-08,12;UBERON:0005103,3.33e-08,8;UBERON:0000083,3.33e-08,8;UBERON:0009201,3.33e-08,8;UBERON:0006553,3.33e-08,8;UBERON:0003074,3.33e-08,8;UBERON:0003060,3.33e-08,8;UBERON:0004638,8.51e-08,18;UBERON:0001986,8.51e-08,18;UBERON:0004852,8.51e-08,18;UBERON:0001638,1.36e-07,9;UBERON:0003920,1.36e-07,9;UBERON:0004582,1.36e-07,9;UBERON:0000080,2.70e-07,9;UBERON:0002120,2.70e-07,9;UBERON:0004875,2.70e-07,9;UBERON:0005721,2.70e-07,9;UBERON:0005754,2.70e-07,9;UBERON:0007297,2.70e-07,9;UBERON:0000058,4.06e-07,19 | |||
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| |||
|short_description=p5@MAP4K2 | |||
}} |
Revision as of 18:49, 10 September 2013
Short description: | p5@MAP4K2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MAP4K2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000482314_5end |
EntrezGene: | MAP4K2 |
HGNC: | 6864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.29e-16 | 36 |
glomerular endothelial cell | 4.32e-13 | 5 |
meso-epithelial cell | 1.65e-12 | 45 |
vein endothelial cell | 2.22e-11 | 6 |
glomerular cell | 2.27e-09 | 7 |
kidney corpuscule cell | 2.27e-09 | 7 |
endothelial cell of sinusoid | 2.33e-09 | 2 |
endothelial cell of hepatic sinusoid | 2.33e-09 | 2 |
lining cell | 4.54e-09 | 58 |
barrier cell | 4.54e-09 | 58 |
lymphoid lineage restricted progenitor cell | 1.49e-08 | 52 |
lymphocyte | 2.40e-08 | 53 |
common lymphoid progenitor | 2.40e-08 | 53 |
blood vessel endothelial cell | 8.51e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.51e-08 | 18 |
endothelial cell of vascular tree | 1.53e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.27e-09 | 7 |
renal glomerulus | 2.27e-09 | 7 |
renal corpuscle | 2.27e-09 | 7 |
glomerular capsule | 2.27e-09 | 7 |
metanephric mesenchyme | 2.27e-09 | 7 |
glomerular tuft | 2.27e-09 | 7 |
S-shaped body | 2.27e-09 | 7 |
renal vesicle | 2.27e-09 | 7 |
comma-shaped body | 2.27e-09 | 7 |
hepatic sinusoid | 2.33e-09 | 2 |
abdomen blood vessel | 2.33e-09 | 2 |
sinusoid | 2.33e-09 | 2 |
abdominal segment blood vessel | 2.33e-09 | 2 |
parenchyma | 3.41e-09 | 15 |
intraembryonic coelom | 2.83e-08 | 12 |
mesonephric epithelium | 3.33e-08 | 8 |
mesonephric tubule | 3.33e-08 | 8 |
nephric duct | 3.33e-08 | 8 |
renal duct | 3.33e-08 | 8 |
mesonephric duct | 3.33e-08 | 8 |
pronephric duct | 3.33e-08 | 8 |
blood vessel endothelium | 8.51e-08 | 18 |
endothelium | 8.51e-08 | 18 |
cardiovascular system endothelium | 8.51e-08 | 18 |
vein | 1.36e-07 | 9 |
venous blood vessel | 1.36e-07 | 9 |
venous system | 1.36e-07 | 9 |
mesonephros | 2.70e-07 | 9 |
pronephros | 2.70e-07 | 9 |
nephrogenic cord | 2.70e-07 | 9 |
pronephric mesoderm | 2.70e-07 | 9 |
rostral part of nephrogenic cord | 2.70e-07 | 9 |
presumptive pronephric mesoderm | 2.70e-07 | 9 |
duct | 4.06e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.