FFCP PHASE1:Hg19::chr12:111844666..111844678,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C656|description=CAGE_peak_at_chr12:111844666..111844678,-|id=chr12:111844666..111844678,-|ontology_enrichment_celltype=CL:0000738!3.15e-67!140;CL:0002057!8.76e-62!42;CL:0000766!1.07e-60!76;CL:0000860!4.73e-57!45;CL:0000037!4.64e-56!172;CL:0000566!4.64e-56!172;CL:0000557!1.47e-53!71;CL:0000988!3.49e-52!182;CL:0000839!7.65e-51!70;CL:0002009!3.98e-50!65;CL:0002031!3.58e-49!124;CL:0000763!2.76e-46!112;CL:0000049!2.76e-46!112;CL:0002032!3.20e-46!165;CL:0000837!3.20e-46!165;CL:0002194!1.57e-45!63;CL:0000576!1.57e-45!63;CL:0000040!1.57e-45!63;CL:0000559!1.57e-45!63;CL:0002087!5.10e-45!119;CL:0000134!3.62e-21!358;CL:0002320!1.80e-20!365;CL:0002393!4.58e-20!9;CL:0002397!4.58e-20!9;CL:0000219!5.08e-18!390;CL:0000034!6.82e-16!444;CL:0000048!4.35e-15!430;CL:0000723!1.14e-14!436;CL:0000451!1.50e-12!10;CL:0000094!2.43e-12!8;CL:0000784!2.92e-10!3;CL:0000623!9.26e-10!3;CL:0000825!9.26e-10!3;CL:0000842!1.43e-09!3;CL:0000767!2.40e-09!3;CL:0000081!8.96e-09!11;CL:0000063!1.88e-08!578;CL:0000840!2.29e-08!5;CL:0001029!2.29e-08!5;CL:0000990!5.57e-08!8;CL:0002371!7.65e-08!591;CL:0000144!7.78e-08!625;CL:0001014!1.51e-07!2;CL:0001016!1.51e-07!2;CL:0000224!2.91e-07!4|ontology_enrichment_celltype_v019=CL:0002393;8.44e-27;6!CL:0002397;8.44e-27;6!CL:0000784;2.95e-20;3!CL:0000623;4.00e-19;3!CL:0000451;7.75e-15;10!CL:0001014;2.22e-14;2!CL:0001016;2.22e-14;2!CL:0000766;2.86e-13;69!CL:0000576;6.47e-13;48!CL:0000860;7.70e-13;33!CL:0002057;7.70e-13;33!CL:0000840;1.66e-10;5!CL:0000473;6.77e-10;39!CL:0000234;6.77e-10;39!CL:0002087;9.88e-10;104!CL:0000226;3.46e-09;3!CL:0000767;3.46e-09;3!CL:0000842;3.46e-09;3!CL:0000094;1.92e-07;8!CL:0000990;3.81e-07;8!CL:0000738;5.60e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,4.83e-36,136;CL:0000037,3.15e-28,168;CL:0000766,5.64e-27,72;CL:0000988,1.55e-26,177;CL:0000860,1.65e-26,42;CL:0002057,1.65e-26,42;CL:0000557,2.25e-26,67;CL:0002009,4.98e-26,61;CL:0002031,6.97e-23,120;CL:0000473,7.58e-23,48;CL:0000234,7.58e-23,48;CL:0002087,1.13e-21,115;CL:0002032,3.47e-21,161;CL:0000837,3.47e-21,161;CL:0000763,3.66e-21,108;CL:0000049,3.66e-21,108;CL:0000839,1.10e-20,66;CL:0002194,1.49e-20,59;CL:0000576,1.49e-20,59;CL:0000040,1.49e-20,59;CL:0000559,1.49e-20,59;CL:0000784,3.15e-20,3;CL:0000623,3.76e-19,3;CL:0000825,3.76e-19,3;CL:0002393,9.43e-18,9;CL:0002397,9.43e-18,9;CL:0000451,7.76e-15,10;CL:0001014,2.08e-14,2;CL:0001016,2.08e-14,2;CL:0000134,1.33e-10,354;CL:0000840,1.63e-10,5;CL:0001029,1.63e-10,5;CL:0002320,2.73e-10,361;CL:0000226,2.75e-09,3;CL:0000842,2.75e-09,3;CL:0000767,2.99e-09,3;CL:0000219,3.46e-09,386;CL:0000034,3.54e-09,441;CL:0000048,7.76e-08,427;CL:0000723,1.19e-07,433;CL:0000094,1.92e-07,8;CL:0000990,3.77e-07,8|ontology_enrichment_development_v019=CL:0002057;3.47e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.26e-49!80;UBERON:0002390!3.96e-47!102;UBERON:0003061!3.96e-47!102;UBERON:0001474!7.51e-45!86;UBERON:0002193!7.07e-42!112;UBERON:0004765!1.30e-36!101;UBERON:0001434!1.30e-36!101;UBERON:0002405!2.66e-34!115;UBERON:0002384!1.60e-19!375;UBERON:0003081!4.74e-18!216;UBERON:0002204!5.86e-18!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.37e-23,76;UBERON:0002390,2.20e-21,98;UBERON:0003061,2.20e-21,98;UBERON:0001474,6.14e-21,82;UBERON:0002193,4.80e-19,108;UBERON:0004765,9.01e-19,90;UBERON:0002405,4.70e-18,93;UBERON:0001434,1.51e-16,100;UBERON:0002384,7.29e-10,371;UBERON:0002204,1.73e-08,167;UBERON:0003081,2.79e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,2.78669021968937,0,0,0,0,0,0.587200878669695,6.64794490238253,8.02177789880567,7.59538047505481,0,0,0,0,0,0,0.464858073811369,0.411167888021826,1.54853185447552,0.28769239232215,0.768482119587302,0.47296445977717,2.06847408441971,1.29096936716765,9.47985406160392,0,0,0.674170453335254,2.14258724659632,1.92557416245656,2.55734850319616,0.329851300186716,0,0,0.290209238628584,0.56738522469114,3.73693349397345,0,0,0.434377689410233,0.605399502633369,0.736555271975129,1.58231193720442,0.845021145247767,3.82687739937078,1.25795187305026,0.786300418025466,0.600707571366025,0.803627933485401,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,5.04457706683382,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01606743224732,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,4.29283123749616,4.57595928624102,7.05769252526173,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C656 | |||
|description=CAGE_peak_at_chr12:111844666..111844678,- | |||
|id=chr12:111844666..111844678,- | |||
|ontology_enrichment_celltype=CL:0000738!3.15e-67!140;CL:0002057!8.76e-62!42;CL:0000766!1.07e-60!76;CL:0000860!4.73e-57!45;CL:0000037!4.64e-56!172;CL:0000566!4.64e-56!172;CL:0000557!1.47e-53!71;CL:0000988!3.49e-52!182;CL:0000839!7.65e-51!70;CL:0002009!3.98e-50!65;CL:0002031!3.58e-49!124;CL:0000763!2.76e-46!112;CL:0000049!2.76e-46!112;CL:0002032!3.20e-46!165;CL:0000837!3.20e-46!165;CL:0002194!1.57e-45!63;CL:0000576!1.57e-45!63;CL:0000040!1.57e-45!63;CL:0000559!1.57e-45!63;CL:0002087!5.10e-45!119;CL:0000134!3.62e-21!358;CL:0002320!1.80e-20!365;CL:0002393!4.58e-20!9;CL:0002397!4.58e-20!9;CL:0000219!5.08e-18!390;CL:0000034!6.82e-16!444;CL:0000048!4.35e-15!430;CL:0000723!1.14e-14!436;CL:0000451!1.50e-12!10;CL:0000094!2.43e-12!8;CL:0000784!2.92e-10!3;CL:0000623!9.26e-10!3;CL:0000825!9.26e-10!3;CL:0000842!1.43e-09!3;CL:0000767!2.40e-09!3;CL:0000081!8.96e-09!11;CL:0000063!1.88e-08!578;CL:0000840!2.29e-08!5;CL:0001029!2.29e-08!5;CL:0000990!5.57e-08!8;CL:0002371!7.65e-08!591;CL:0000144!7.78e-08!625;CL:0001014!1.51e-07!2;CL:0001016!1.51e-07!2;CL:0000224!2.91e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002393;8.44e-27;6!CL:0002397;8.44e-27;6!CL:0000784;2.95e-20;3!CL:0000623;4.00e-19;3!CL:0000451;7.75e-15;10!CL:0001014;2.22e-14;2!CL:0001016;2.22e-14;2!CL:0000766;2.86e-13;69!CL:0000576;6.47e-13;48!CL:0000860;7.70e-13;33!CL:0002057;7.70e-13;33!CL:0000840;1.66e-10;5!CL:0000473;6.77e-10;39!CL:0000234;6.77e-10;39!CL:0002087;9.88e-10;104!CL:0000226;3.46e-09;3!CL:0000767;3.46e-09;3!CL:0000842;3.46e-09;3!CL:0000094;1.92e-07;8!CL:0000990;3.81e-07;8!CL:0000738;5.60e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.83e-36,136;CL:0000037,3.15e-28,168;CL:0000766,5.64e-27,72;CL:0000988,1.55e-26,177;CL:0000860,1.65e-26,42;CL:0002057,1.65e-26,42;CL:0000557,2.25e-26,67;CL:0002009,4.98e-26,61;CL:0002031,6.97e-23,120;CL:0000473,7.58e-23,48;CL:0000234,7.58e-23,48;CL:0002087,1.13e-21,115;CL:0002032,3.47e-21,161;CL:0000837,3.47e-21,161;CL:0000763,3.66e-21,108;CL:0000049,3.66e-21,108;CL:0000839,1.10e-20,66;CL:0002194,1.49e-20,59;CL:0000576,1.49e-20,59;CL:0000040,1.49e-20,59;CL:0000559,1.49e-20,59;CL:0000784,3.15e-20,3;CL:0000623,3.76e-19,3;CL:0000825,3.76e-19,3;CL:0002393,9.43e-18,9;CL:0002397,9.43e-18,9;CL:0000451,7.76e-15,10;CL:0001014,2.08e-14,2;CL:0001016,2.08e-14,2;CL:0000134,1.33e-10,354;CL:0000840,1.63e-10,5;CL:0001029,1.63e-10,5;CL:0002320,2.73e-10,361;CL:0000226,2.75e-09,3;CL:0000842,2.75e-09,3;CL:0000767,2.99e-09,3;CL:0000219,3.46e-09,386;CL:0000034,3.54e-09,441;CL:0000048,7.76e-08,427;CL:0000723,1.19e-07,433;CL:0000094,1.92e-07,8;CL:0000990,3.77e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.26e-49!80;UBERON:0002390!3.96e-47!102;UBERON:0003061!3.96e-47!102;UBERON:0001474!7.51e-45!86;UBERON:0002193!7.07e-42!112;UBERON:0004765!1.30e-36!101;UBERON:0001434!1.30e-36!101;UBERON:0002405!2.66e-34!115;UBERON:0002384!1.60e-19!375;UBERON:0003081!4.74e-18!216;UBERON:0002204!5.86e-18!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.37e-23,76;UBERON:0002390,2.20e-21,98;UBERON:0003061,2.20e-21,98;UBERON:0001474,6.14e-21,82;UBERON:0002193,4.80e-19,108;UBERON:0004765,9.01e-19,90;UBERON:0002405,4.70e-18,93;UBERON:0001434,1.51e-16,100;UBERON:0002384,7.29e-10,371;UBERON:0002204,1.73e-08,167;UBERON:0003081,2.79e-08,203 | |||
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|short_description=p@chr12:111844666..111844678,- | |||
}} |
Revision as of 20:54, 10 September 2013
Short description: | p@chr12:111844666..111844678, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111844666..111844678, - |
Coexpression cluster: | C656_CD14_immature_Dendritic_Basophils_CD34_CD133_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.37e-23 | 76 |
hematopoietic system | 2.20e-21 | 98 |
blood island | 2.20e-21 | 98 |
bone element | 6.14e-21 | 82 |
hemolymphoid system | 4.80e-19 | 108 |
skeletal element | 9.01e-19 | 90 |
immune system | 4.70e-18 | 93 |
skeletal system | 1.51e-16 | 100 |
connective tissue | 7.29e-10 | 371 |
musculoskeletal system | 1.73e-08 | 167 |
lateral plate mesoderm | 2.79e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.