FFCP PHASE1:Hg19::chr12:118796975..118796986,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51347|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18133|TSSclassifier=W|UniProt=F5GY38|association_with_transcript=-4bp_to_ENST00000542902_5end|coexpression_cluster_id=C0|description=CAGE_peak_12_at_TAOK3_5end|id=chr12:118796975..118796986,-|ontology_enrichment_celltype=CL:0002057!2.59e-72!42;CL:0000839!1.26e-70!70;CL:0000557!1.92e-69!71;CL:0000860!1.03e-66!45;CL:0000766!5.49e-64!76;CL:0002194!1.61e-63!63;CL:0000576!1.61e-63!63;CL:0000040!1.61e-63!63;CL:0000559!1.61e-63!63;CL:0002009!3.45e-61!65;CL:0002031!6.34e-50!124;CL:0000763!1.17e-48!112;CL:0000049!1.17e-48!112;CL:0002087!2.18e-44!119;CL:0000738!4.34e-44!140;CL:0000037!5.96e-42!172;CL:0000566!5.96e-42!172;CL:0002032!3.15e-41!165;CL:0000837!3.15e-41!165;CL:0000988!1.03e-38!182;CL:0000134!1.10e-13!358;CL:0002320!4.19e-13!365;CL:0002393!6.96e-12!9;CL:0002397!6.96e-12!9;CL:0000219!1.14e-11!390;CL:0002274!2.79e-11!5;CL:0000457!2.79e-11!5;CL:0002191!2.79e-11!5;CL:0000097!2.79e-11!5;CL:0000831!2.79e-11!5;CL:0002028!2.79e-11!5;CL:0000034!1.46e-09!444;CL:0000048!3.31e-09!430;CL:0000723!7.40e-09!436|ontology_enrichment_celltype_v019=CL:0000860;1.14e-99;33!CL:0002057;1.14e-99;33!CL:0000473;1.40e-68;39!CL:0000234;1.40e-68;39!CL:0000576;1.04e-48;48!CL:0000766;7.70e-25;69!CL:0002087;3.81e-14;104!CL:0000763;5.00e-13;100!CL:0000738;1.12e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,4.63e-92,42;CL:0002057,4.63e-92,42;CL:0000473,3.23e-80,48;CL:0000234,3.23e-80,48;CL:0002194,1.26e-63,59;CL:0000576,1.26e-63,59;CL:0000040,1.26e-63,59;CL:0000559,1.26e-63,59;CL:0002009,1.74e-61,61;CL:0000839,1.09e-56,66;CL:0000557,8.17e-56,67;CL:0000766,8.45e-52,72;CL:0000763,9.59e-34,108;CL:0000049,9.59e-34,108;CL:0002087,1.57e-31,115;CL:0002031,4.16e-30,120;CL:0000738,3.03e-26,136;CL:0002032,9.91e-22,161;CL:0000837,9.91e-22,161;CL:0000037,1.05e-20,168;CL:0000988,1.67e-19,177;CL:0000134,3.55e-08,354;CL:0002320,5.93e-08,361;CL:0000219,3.63e-07,386;CL:0000034,9.09e-07,441|ontology_enrichment_development_v019=CL:0002057;3.49e-62;42!CL:0000049;9.03e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.70e-63!80;UBERON:0001474!1.73e-57!86;UBERON:0002390!2.89e-48!102;UBERON:0003061!2.89e-48!102;UBERON:0004765!7.04e-47!101;UBERON:0001434!7.04e-47!101;UBERON:0002405!3.02e-43!115;UBERON:0002193!1.10e-42!112;UBERON:0002204!1.50e-26!167;UBERON:0003081!3.03e-17!216;UBERON:0002384!2.60e-12!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.81e-49,76;UBERON:0001474,3.22e-45,82;UBERON:0004765,5.43e-41,90;UBERON:0002405,1.36e-39,93;UBERON:0002390,1.90e-37,98;UBERON:0003061,1.90e-37,98;UBERON:0001434,1.20e-36,100;UBERON:0002193,9.59e-34,108;UBERON:0002204,7.60e-21,167;UBERON:0003081,1.27e-16,203;UBERON:0000926,1.35e-09,315;UBERON:0004120,1.35e-09,315;UBERON:0006603,1.35e-09,315;UBERON:0002384,1.20e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,1.10799081706375,0.802177789880567,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,3.15359279544161,1.62700325833979,0.822335776043652,7.12324653058738,0.863077176966451,0.512321413058201,8.74984250587765,34.8193137543985,19.3645405075148,28.4395621848118,0.941211697713023,1.09162460023138,7.41587498668779,18.6711174346251,36.5859090866747,35.1635419189473,0.329851300186716,0.199463657621632,2.13112375266347,14.2202526928006,10.2129340444405,19.9303119678584,0.75374599577023,0,2.82345498116652,15.1349875658342,34.2498201468435,43.3553470794012,0.211255286311942,0.850417199860174,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0.144119953416961,0.6312121671319,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18133 | |||
|TSSclassifier=W | |||
|UniProt=F5GY38 | |||
|association_with_transcript=-4bp_to_ENST00000542902_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_TAOK3_5end | |||
|id=chr12:118796975..118796986,- | |||
|ontology_enrichment_celltype=CL:0002057!2.59e-72!42;CL:0000839!1.26e-70!70;CL:0000557!1.92e-69!71;CL:0000860!1.03e-66!45;CL:0000766!5.49e-64!76;CL:0002194!1.61e-63!63;CL:0000576!1.61e-63!63;CL:0000040!1.61e-63!63;CL:0000559!1.61e-63!63;CL:0002009!3.45e-61!65;CL:0002031!6.34e-50!124;CL:0000763!1.17e-48!112;CL:0000049!1.17e-48!112;CL:0002087!2.18e-44!119;CL:0000738!4.34e-44!140;CL:0000037!5.96e-42!172;CL:0000566!5.96e-42!172;CL:0002032!3.15e-41!165;CL:0000837!3.15e-41!165;CL:0000988!1.03e-38!182;CL:0000134!1.10e-13!358;CL:0002320!4.19e-13!365;CL:0002393!6.96e-12!9;CL:0002397!6.96e-12!9;CL:0000219!1.14e-11!390;CL:0002274!2.79e-11!5;CL:0000457!2.79e-11!5;CL:0002191!2.79e-11!5;CL:0000097!2.79e-11!5;CL:0000831!2.79e-11!5;CL:0002028!2.79e-11!5;CL:0000034!1.46e-09!444;CL:0000048!3.31e-09!430;CL:0000723!7.40e-09!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-99;33!CL:0002057;1.14e-99;33!CL:0000473;1.40e-68;39!CL:0000234;1.40e-68;39!CL:0000576;1.04e-48;48!CL:0000766;7.70e-25;69!CL:0002087;3.81e-14;104!CL:0000763;5.00e-13;100!CL:0000738;1.12e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.63e-92,42;CL:0002057,4.63e-92,42;CL:0000473,3.23e-80,48;CL:0000234,3.23e-80,48;CL:0002194,1.26e-63,59;CL:0000576,1.26e-63,59;CL:0000040,1.26e-63,59;CL:0000559,1.26e-63,59;CL:0002009,1.74e-61,61;CL:0000839,1.09e-56,66;CL:0000557,8.17e-56,67;CL:0000766,8.45e-52,72;CL:0000763,9.59e-34,108;CL:0000049,9.59e-34,108;CL:0002087,1.57e-31,115;CL:0002031,4.16e-30,120;CL:0000738,3.03e-26,136;CL:0002032,9.91e-22,161;CL:0000837,9.91e-22,161;CL:0000037,1.05e-20,168;CL:0000988,1.67e-19,177;CL:0000134,3.55e-08,354;CL:0002320,5.93e-08,361;CL:0000219,3.63e-07,386;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-62;42!CL:0000049;9.03e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.70e-63!80;UBERON:0001474!1.73e-57!86;UBERON:0002390!2.89e-48!102;UBERON:0003061!2.89e-48!102;UBERON:0004765!7.04e-47!101;UBERON:0001434!7.04e-47!101;UBERON:0002405!3.02e-43!115;UBERON:0002193!1.10e-42!112;UBERON:0002204!1.50e-26!167;UBERON:0003081!3.03e-17!216;UBERON:0002384!2.60e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.81e-49,76;UBERON:0001474,3.22e-45,82;UBERON:0004765,5.43e-41,90;UBERON:0002405,1.36e-39,93;UBERON:0002390,1.90e-37,98;UBERON:0003061,1.90e-37,98;UBERON:0001434,1.20e-36,100;UBERON:0002193,9.59e-34,108;UBERON:0002204,7.60e-21,167;UBERON:0003081,1.27e-16,203;UBERON:0000926,1.35e-09,315;UBERON:0004120,1.35e-09,315;UBERON:0006603,1.35e-09,315;UBERON:0002384,1.20e-07,371 | |||
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|short_description=p12@TAOK3 | |||
}} |
Revision as of 21:10, 10 September 2013
Short description: | p12@TAOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_TAOK3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -4bp_to_ENST00000542902_5end |
EntrezGene: | TAOK3 |
HGNC: | 18133 |
UniProt: | F5GY38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.63e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.63e-92 | 42 |
defensive cell | 3.23e-80 | 48 |
phagocyte | 3.23e-80 | 48 |
monopoietic cell | 1.26e-63 | 59 |
monocyte | 1.26e-63 | 59 |
monoblast | 1.26e-63 | 59 |
promonocyte | 1.26e-63 | 59 |
macrophage dendritic cell progenitor | 1.74e-61 | 61 |
myeloid lineage restricted progenitor cell | 1.09e-56 | 66 |
granulocyte monocyte progenitor cell | 8.17e-56 | 67 |
myeloid leukocyte | 8.45e-52 | 72 |
myeloid cell | 9.59e-34 | 108 |
common myeloid progenitor | 9.59e-34 | 108 |
nongranular leukocyte | 1.57e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 4.16e-30 | 120 |
leukocyte | 3.03e-26 | 136 |
hematopoietic oligopotent progenitor cell | 9.91e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.91e-22 | 161 |
hematopoietic stem cell | 1.05e-20 | 168 |
hematopoietic cell | 1.67e-19 | 177 |
mesenchymal cell | 3.55e-08 | 354 |
connective tissue cell | 5.93e-08 | 361 |
motile cell | 3.63e-07 | 386 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.81e-49 | 76 |
bone element | 3.22e-45 | 82 |
skeletal element | 5.43e-41 | 90 |
immune system | 1.36e-39 | 93 |
hematopoietic system | 1.90e-37 | 98 |
blood island | 1.90e-37 | 98 |
skeletal system | 1.20e-36 | 100 |
hemolymphoid system | 9.59e-34 | 108 |
musculoskeletal system | 7.60e-21 | 167 |
lateral plate mesoderm | 1.27e-16 | 203 |
mesoderm | 1.35e-09 | 315 |
mesoderm-derived structure | 1.35e-09 | 315 |
presumptive mesoderm | 1.35e-09 | 315 |
connective tissue | 1.20e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.