FFCP PHASE1:Hg19::chr12:20848377..20848399,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=53919|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13819|TSSclassifier=S|UniProt=Q9NYB5,Q5JPA4,B7Z3Q3,B7Z251,F5GZD6|association_with_transcript=0bp_to_ENST00000266509,ENST00000381552,ENST00000540354,NM_001145944,NM_017435,uc001rei.2,uc010sik.1_5end|coexpression_cluster_id=C1305|description=CAGE_peak_5_at_SLCO1C1_5end|id=chr12:20848377..20848399,+|ontology_enrichment_celltype=CL:0002605!4.65e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.45e-19;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.57e-84!57;UBERON:0005068!3.57e-84!57;UBERON:0006241!3.57e-84!57;UBERON:0007135!3.57e-84!57;UBERON:0001017!4.07e-75!82;UBERON:0005743!4.81e-74!86;UBERON:0002616!2.20e-73!59;UBERON:0002780!1.56e-70!41;UBERON:0001890!1.56e-70!41;UBERON:0006240!1.56e-70!41;UBERON:0003080!1.31e-68!42;UBERON:0000073!4.20e-68!94;UBERON:0001016!4.20e-68!94;UBERON:0007023!2.69e-66!115;UBERON:0000955!8.45e-63!69;UBERON:0006238!8.45e-63!69;UBERON:0002346!9.29e-61!90;UBERON:0001893!3.88e-60!34;UBERON:0002020!6.72e-60!34;UBERON:0003528!6.72e-60!34;UBERON:0003075!1.08e-58!86;UBERON:0007284!1.08e-58!86;UBERON:0002791!3.79e-58!33;UBERON:0001869!8.55e-56!32;UBERON:0003056!9.64e-47!61;UBERON:0000956!2.45e-41!25;UBERON:0000203!2.45e-41!25;UBERON:0000924!4.58e-37!173;UBERON:0006601!4.58e-37!173;UBERON:0000153!9.58e-37!129;UBERON:0007811!9.58e-37!129;UBERON:0000033!5.92e-36!123;UBERON:0002619!7.36e-36!22;UBERON:0004121!4.10e-35!169;UBERON:0001950!1.55e-31!20;UBERON:0000025!1.70e-20!194;UBERON:0002420!4.03e-20!9;UBERON:0007245!4.03e-20!9;UBERON:0010009!4.03e-20!9;UBERON:0010011!4.03e-20!9;UBERON:0000454!4.03e-20!9;UBERON:0002308!7.35e-20!9;UBERON:0000125!7.35e-20!9;UBERON:0004111!1.08e-17!241;UBERON:0003076!2.52e-16!15;UBERON:0003057!2.52e-16!15;UBERON:0009663!4.35e-16!7;UBERON:0000477!1.24e-14!286;UBERON:0002298!6.28e-14!8;UBERON:0000349!4.67e-12!5;UBERON:0002021!1.05e-11!5;UBERON:0001894!1.69e-11!7;UBERON:0006222!1.69e-11!7;UBERON:0000475!1.83e-11!365;UBERON:0001872!2.87e-11!5;UBERON:0000483!3.74e-11!309;UBERON:0004733!4.63e-11!12;UBERON:0002028!4.63e-11!12;UBERON:0007277!4.63e-11!12;UBERON:0000119!6.67e-11!312;UBERON:0001871!2.75e-10!7;UBERON:0004732!4.37e-10!13;UBERON:0000064!5.38e-10!219;UBERON:0000200!8.03e-10!6;UBERON:0000369!9.18e-10!4;UBERON:0002435!9.18e-10!4;UBERON:0000204!9.18e-10!4;UBERON:0010082!9.18e-10!4;UBERON:0000481!2.22e-09!347;UBERON:0001896!3.12e-08!3;UBERON:0005290!3.12e-08!3;UBERON:0010096!3.12e-08!3;UBERON:0000062!3.30e-08!511;UBERON:0002771!3.67e-08!3;UBERON:0000922!4.77e-08!612;UBERON:0005383!7.83e-08!3;UBERON:0005382!7.83e-08!3;UBERON:0006331!1.47e-07!3;UBERON:0002240!1.53e-07!3;UBERON:0000988!1.87e-07!3;UBERON:0000923!2.24e-07!604;UBERON:0005291!2.24e-07!604;UBERON:0006598!2.24e-07!604;UBERON:0002532!2.24e-07!604;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000468!5.80e-07!659|ontology_enrichment_uberon_v019=UBERON:0002780;2.13e-54;41!UBERON:0001890;2.13e-54;41!UBERON:0000073;8.75e-52;53!UBERON:0002616;8.75e-52;53!UBERON:0001893;6.49e-51;34!UBERON:0003528;2.27e-48;34!UBERON:0002020;2.27e-48;34!UBERON:0002791;3.49e-48;32!UBERON:0001869;3.85e-47;32!UBERON:0000956;6.93e-35;25!UBERON:0000203;6.93e-35;25!UBERON:0002619;1.01e-34;22!UBERON:0001017;3.10e-30;75!UBERON:0000125;1.02e-29;9!UBERON:0002308;1.02e-29;9!UBERON:0001950;1.03e-27;20!UBERON:0002298;4.36e-26;6!UBERON:0000955;2.95e-25;68!UBERON:0001016;3.41e-23;83!UBERON:0002420;3.60e-23;9!UBERON:0007245;3.60e-23;9!UBERON:0010009;3.60e-23;9!UBERON:0010011;3.60e-23;9!UBERON:0000454;3.60e-23;9!UBERON:0009663;4.61e-22;7!UBERON:0001894;1.26e-15;7!UBERON:0000349;8.91e-15;5!UBERON:0007023;1.44e-14;114!UBERON:0001896;1.74e-14;3!UBERON:0005290;1.74e-14;3!UBERON:0000988;2.22e-13;3!UBERON:0004733;9.45e-13;12!UBERON:0002028;9.45e-13;12!UBERON:0000200;4.21e-12;6!UBERON:0004732;1.01e-11;13!UBERON:0011216;1.04e-10;132!UBERON:0000369;1.59e-10;4!UBERON:0002435;1.59e-10;4!UBERON:0003296;1.59e-10;4!UBERON:0010133;1.59e-10;4!UBERON:0000204;1.59e-10;4!UBERON:0002784;2.06e-10;4!UBERON:0001954;2.42e-10;2!UBERON:0003022;2.42e-10;2!UBERON:0002421;2.42e-10;2!UBERON:0002600;2.42e-10;2!UBERON:0000007;5.48e-10;2!UBERON:0002771;7.84e-10;2!UBERON:0001897;7.84e-10;2!UBERON:0001875;7.84e-10;2!UBERON:0006514;7.84e-10;2!UBERON:0010225;7.84e-10;2!UBERON:0002148;1.73e-09;2!UBERON:0006331;1.73e-09;2!UBERON:0009662;1.73e-09;2!UBERON:0002021;9.30e-09;5!UBERON:0001872;3.22e-08;5!UBERON:0001870;6.36e-07;3!UBERON:0005383;6.36e-07;3!UBERON:0005382;6.36e-07;3!UBERON:0010314;6.60e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.14e-92,56;UBERON:0005068,1.14e-92,56;UBERON:0006241,1.14e-92,56;UBERON:0007135,1.14e-92,56;UBERON:0000073,3.77e-87,53;UBERON:0002616,3.77e-87,53;UBERON:0001017,2.25e-77,81;UBERON:0002780,3.59e-76,41;UBERON:0001890,3.59e-76,41;UBERON:0003080,3.59e-76,41;UBERON:0006240,3.59e-76,41;UBERON:0000955,8.80e-70,68;UBERON:0006238,8.80e-70,68;UBERON:0002346,1.65e-69,86;UBERON:0001016,5.25e-69,89;UBERON:0003075,3.68e-65,82;UBERON:0007284,3.68e-65,82;UBERON:0001893,1.04e-61,34;UBERON:0003528,2.27e-61,34;UBERON:0002020,2.27e-61,34;UBERON:0002791,1.39e-54,32;UBERON:0001869,2.44e-54,32;UBERON:0003056,1.55e-53,61;UBERON:0010371,7.62e-50,104;UBERON:0007023,4.42e-48,114;UBERON:0010314,5.23e-40,132;UBERON:0004121,5.73e-39,171;UBERON:0000924,5.73e-39,171;UBERON:0006601,5.73e-39,171;UBERON:0000956,3.12e-35,25;UBERON:0000203,3.12e-35,25;UBERON:0002619,3.95e-35,22;UBERON:0000125,8.87e-30,9;UBERON:0002308,8.87e-30,9;UBERON:0001950,4.42e-28,20;UBERON:0011216,5.30e-26,223;UBERON:0002298,8.69e-26,6;UBERON:0002420,1.48e-23,9;UBERON:0007245,1.48e-23,9;UBERON:0010009,1.48e-23,9;UBERON:0010011,1.48e-23,9;UBERON:0000454,1.48e-23,9;UBERON:0009663,1.89e-22,7;UBERON:0000025,7.84e-22,192;UBERON:0003076,2.13e-17,15;UBERON:0003057,2.13e-17,15;UBERON:0004111,6.55e-16,240;UBERON:0001894,1.87e-15,7;UBERON:0006222,1.87e-15,7;UBERON:0000349,9.96e-15,5;UBERON:0001896,1.53e-14,3;UBERON:0005290,1.53e-14,3;UBERON:0010096,1.53e-14,3;UBERON:0000988,4.94e-13,3;UBERON:0004733,1.32e-12,12;UBERON:0002028,1.32e-12,12;UBERON:0007277,1.32e-12,12;UBERON:0000200,3.99e-12,6;UBERON:0000483,9.15e-12,306;UBERON:0004732,1.37e-11,13;UBERON:0000119,1.42e-11,309;UBERON:0000369,1.42e-10,4;UBERON:0002435,1.42e-10,4;UBERON:0000204,1.42e-10,4;UBERON:0010082,1.42e-10,4;UBERON:0001954,2.32e-10,2;UBERON:0003022,2.32e-10,2;UBERON:0002421,2.32e-10,2;UBERON:0002600,2.32e-10,2;UBERON:0002784,2.47e-10,4;UBERON:0003296,3.00e-10,4;UBERON:0010133,3.00e-10,4;UBERON:0002771,4.81e-10,2;UBERON:0001875,5.50e-10,2;UBERON:0006514,5.50e-10,2;UBERON:0001897,5.75e-10,2;UBERON:0010225,5.75e-10,2;UBERON:0000007,7.52e-10,2;UBERON:0002148,4.11e-09,2;UBERON:0006331,4.11e-09,2;UBERON:0009662,4.11e-09,2;UBERON:0002021,7.45e-09,5;UBERON:0001872,2.35e-08,5;UBERON:0000923,6.88e-08,560;UBERON:0010316,6.88e-08,560;UBERON:0005291,6.88e-08,560;UBERON:0006598,6.88e-08,560;UBERON:0010317,6.88e-08,560;UBERON:0002532,6.88e-08,560;UBERON:0002050,9.07e-08,564;UBERON:0005423,2.83e-07,581;UBERON:0005383,4.73e-07,3;UBERON:0005382,4.73e-07,3;UBERON:0000922,5.70e-07,592;UBERON:0001870,7.83e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55732473911449,0,2.31986643833309,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0.994147647766298,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,2.04089815956073,0,0,0,0,0,0,0,0,0,0,0.885741385813839,3.73848959738765,0,0.552896299656123,0.591095237907095,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,2.08943512240099,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.32952671507345,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.19048606227189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.67749196501254,0.160753148465019,0,0,0,0,1.70098758642469,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.19009341568421,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,2.56255156294123,3.1297732676625,6.30750115259078,3.88251680378983,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,12.0217691331232,0.558644917973244,0,0,0,0,0,1.28458450192919,4.25089728976755,2.55414174491442,1.64093091392604,0.504143392443436,0.96820153449905,1.45328081068666,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.2832141077495,1.56215619722769,1.86018116851066,1.45856363445986,0.546974809018219,0,0,1.58284119923659,0,0,1.00885116665647,3.03482802118316,1.36597314810779,0.08870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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=53919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYB5,Q5JPA4,B7Z3Q3,B7Z251,F5GZD6 | |||
|association_with_transcript=0bp_to_ENST00000266509,ENST00000381552,ENST00000540354,NM_001145944,NM_017435,uc001rei.2,uc010sik.1_5end | |||
|coexpression_cluster_id=C1305 | |||
|description=CAGE_peak_5_at_SLCO1C1_5end | |||
|id=chr12:20848377..20848399,+ | |||
|ontology_enrichment_celltype=CL:0002605!4.65e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SLCO1C1 | |||
}} |
Revision as of 22:06, 10 September 2013
Short description: | p5@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | 0bp_to_ENST00000266509, ENST00000381552, ENST00000540354, NM_001145944, NM_017435, uc001rei.2, uc010sik.1_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | Q9NYB5Q5JPA4B7Z3Q3B7Z251F5GZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.