FFCP PHASE1:Hg19::chr12:68726405..68726424,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=106bp_to_AK125933_5end|coexpression_cluster_id=C450|description=CAGE_peak_1_at_AK125933_5end|id=chr12:68726405..68726424,+|ontology_enrichment_celltype=CL:0000738!5.40e-26!140;CL:0002087!6.79e-23!119;CL:0002057!4.86e-22!42;CL:0000860!9.85e-22!45;CL:0002031!2.25e-21!124;CL:0000988!9.61e-20!182;CL:0000037!1.40e-19!172;CL:0000566!1.40e-19!172;CL:0002032!2.17e-17!165;CL:0000837!2.17e-17!165;CL:0000766!1.27e-15!76;CL:0002194!3.50e-12!63;CL:0000576!3.50e-12!63;CL:0000040!3.50e-12!63;CL:0000559!3.50e-12!63;CL:0002009!4.74e-12!65;CL:0000839!6.96e-12!70;CL:0000557!2.20e-11!71;CL:0000838!5.73e-10!52;CL:0000542!1.64e-09!53;CL:0000051!1.64e-09!53;CL:0000763!9.28e-09!112;CL:0000049!9.28e-09!112;CL:0002393!1.10e-08!9;CL:0002397!1.10e-08!9|ontology_enrichment_celltype_v019=CL:0000576;2.70e-19;48!CL:0000094;9.09e-18;8!CL:0002393;4.13e-17;6!CL:0002397;4.13e-17;6!CL:0000766;2.27e-16;69!CL:0000860;2.88e-16;33!CL:0002057;2.88e-16;33!CL:0000081;4.83e-16;11!CL:0000473;5.40e-12;39!CL:0000234;5.40e-12;39!CL:0002087;5.34e-10;104!CL:0000875;7.02e-10;3!CL:0002396;7.02e-10;3!CL:0000767;8.45e-10;3!CL:0000738;5.30e-08;136!CL:0000763;2.74e-07;100!CL:0000771;4.62e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,2.86e-37,42;CL:0002057,2.86e-37,42;CL:0000738,2.00e-33,136;CL:0000766,6.93e-33,72;CL:0000473,1.14e-31,48;CL:0000234,1.14e-31,48;CL:0002087,9.05e-28,115;CL:0000037,1.77e-27,168;CL:0000988,8.50e-27,177;CL:0002393,2.23e-25,9;CL:0002397,2.23e-25,9;CL:0002032,5.33e-25,161;CL:0000837,5.33e-25,161;CL:0002194,7.41e-24,59;CL:0000576,7.41e-24,59;CL:0000040,7.41e-24,59;CL:0000559,7.41e-24,59;CL:0002031,4.08e-23,120;CL:0002009,7.49e-23,61;CL:0000839,1.32e-20,66;CL:0000763,1.86e-20,108;CL:0000049,1.86e-20,108;CL:0000557,3.38e-20,67;CL:0000094,7.42e-18,8;CL:0000081,3.24e-16,11;CL:0000875,7.23e-10,3;CL:0002396,7.23e-10,3;CL:0000767,8.34e-10,3;CL:0000134,1.03e-07,354;CL:0002320,2.44e-07,361;CL:0000771,4.34e-07,2|ontology_enrichment_development_v019=CL:0002057;4.15e-27;42!CL:0000049;6.51e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.89e-11!102;UBERON:0003061!2.89e-11!102;UBERON:0002193!1.02e-09!112;UBERON:0002371!1.10e-09!80;UBERON:0001474!1.71e-09!86;UBERON:0001049!4.75e-07!57;UBERON:0005068!4.75e-07!57;UBERON:0006241!4.75e-07!57;UBERON:0007135!4.75e-07!57;UBERON:0004765!7.87e-07!101;UBERON:0001434!7.87e-07!101|ontology_enrichment_uberon_v019=UBERON:0003296;7.02e-11;4!UBERON:0010133;7.02e-11;4|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-22,98;UBERON:0003061,1.28e-22,98;UBERON:0002371,3.14e-20,76;UBERON:0002193,1.08e-19,108;UBERON:0001474,3.26e-18,82;UBERON:0004765,6.01e-16,90;UBERON:0002405,3.36e-15,93;UBERON:0001434,1.23e-13,100;UBERON:0003296,2.38e-10,4;UBERON:0010133,2.38e-10,4;UBERON:0002384,6.95e-08,371;UBERON:0003081,7.14e-08,203|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.572471974262113,0,0.125542639594803,0.305653622991805,0.328402357799783,0.787107813136792,3.54027849164014,4.98978217526377,5.10893206943051,0,0,0,0.309868802321207,0.284338464974843,1.17440175733939,1.10799081706375,1.80490002723128,7.16135873362311,0,0,0,0.436194716338694,0,1.4555043671269,1.39457422143411,2.87817521615278,0.619412741790207,0,0.512321413058201,1.89185783910868,0.344745680736619,1.29096936716765,1.35426486594342,1.12945403725563,0.545812300115692,0.449446968890169,0.612167784741805,0.641858054152187,2.55734850319616,1.31940520074686,0.997318288108159,0,0.870627715885752,0.56738522469114,1.86846674698672,0.251248665256743,1.0429658368404,1.08594422352558,0.605399502633369,1.10483290796269,3.16462387440884,6.97142444829408,4.25208599930087,7.96702852931828,1.46027220490444,1.05123824989054,1.76798145366788,6.27028036230747,3.9783335439818,6.02791707423292,0,0.546138611262131,0.889509253863555,0.853460445133014,0.800791974072025,1.14950487990897,0.661044872784862,0,1.1384259382189,1.17447437874188,1.14681968437569,1.32171328579026,1.68152568894461,0.263384084775077,1.180258620683,1.17903228824749,0.822405995998037,0,0,1.4203434172042,0,0.334231370655521,0.589211814949674,0.443067789167242,1.35401931882508,0,0.130059347559878,0,0.276350017785848,0,0.296573126324121,0.267540828089713,3.1360657141493,0.226618685395132,0.766440987203842,0,0.759059076058509,0.637130828648193,0,0,1.05402583354441,0.639933055772092,0,0.473554504088034,0,1.00803371612366,1.06976078313403,1.44824403882799,0,0.670700859703636,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.392937226493138,0,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=106bp_to_AK125933_5end | |||
|coexpression_cluster_id=C450 | |||
|description=CAGE_peak_1_at_AK125933_5end | |||
|id=chr12:68726405..68726424,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.40e-26!140;CL:0002087!6.79e-23!119;CL:0002057!4.86e-22!42;CL:0000860!9.85e-22!45;CL:0002031!2.25e-21!124;CL:0000988!9.61e-20!182;CL:0000037!1.40e-19!172;CL:0000566!1.40e-19!172;CL:0002032!2.17e-17!165;CL:0000837!2.17e-17!165;CL:0000766!1.27e-15!76;CL:0002194!3.50e-12!63;CL:0000576!3.50e-12!63;CL:0000040!3.50e-12!63;CL:0000559!3.50e-12!63;CL:0002009!4.74e-12!65;CL:0000839!6.96e-12!70;CL:0000557!2.20e-11!71;CL:0000838!5.73e-10!52;CL:0000542!1.64e-09!53;CL:0000051!1.64e-09!53;CL:0000763!9.28e-09!112;CL:0000049!9.28e-09!112;CL:0002393!1.10e-08!9;CL:0002397!1.10e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.70e-19;48!CL:0000094;9.09e-18;8!CL:0002393;4.13e-17;6!CL:0002397;4.13e-17;6!CL:0000766;2.27e-16;69!CL:0000860;2.88e-16;33!CL:0002057;2.88e-16;33!CL:0000081;4.83e-16;11!CL:0000473;5.40e-12;39!CL:0000234;5.40e-12;39!CL:0002087;5.34e-10;104!CL:0000875;7.02e-10;3!CL:0002396;7.02e-10;3!CL:0000767;8.45e-10;3!CL:0000738;5.30e-08;136!CL:0000763;2.74e-07;100!CL:0000771;4.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.86e-37,42;CL:0002057,2.86e-37,42;CL:0000738,2.00e-33,136;CL:0000766,6.93e-33,72;CL:0000473,1.14e-31,48;CL:0000234,1.14e-31,48;CL:0002087,9.05e-28,115;CL:0000037,1.77e-27,168;CL:0000988,8.50e-27,177;CL:0002393,2.23e-25,9;CL:0002397,2.23e-25,9;CL:0002032,5.33e-25,161;CL:0000837,5.33e-25,161;CL:0002194,7.41e-24,59;CL:0000576,7.41e-24,59;CL:0000040,7.41e-24,59;CL:0000559,7.41e-24,59;CL:0002031,4.08e-23,120;CL:0002009,7.49e-23,61;CL:0000839,1.32e-20,66;CL:0000763,1.86e-20,108;CL:0000049,1.86e-20,108;CL:0000557,3.38e-20,67;CL:0000094,7.42e-18,8;CL:0000081,3.24e-16,11;CL:0000875,7.23e-10,3;CL:0002396,7.23e-10,3;CL:0000767,8.34e-10,3;CL:0000134,1.03e-07,354;CL:0002320,2.44e-07,361;CL:0000771,4.34e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-27;42!CL:0000049;6.51e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.89e-11!102;UBERON:0003061!2.89e-11!102;UBERON:0002193!1.02e-09!112;UBERON:0002371!1.10e-09!80;UBERON:0001474!1.71e-09!86;UBERON:0001049!4.75e-07!57;UBERON:0005068!4.75e-07!57;UBERON:0006241!4.75e-07!57;UBERON:0007135!4.75e-07!57;UBERON:0004765!7.87e-07!101;UBERON:0001434!7.87e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;7.02e-11;4!UBERON:0010133;7.02e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-22,98;UBERON:0003061,1.28e-22,98;UBERON:0002371,3.14e-20,76;UBERON:0002193,1.08e-19,108;UBERON:0001474,3.26e-18,82;UBERON:0004765,6.01e-16,90;UBERON:0002405,3.36e-15,93;UBERON:0001434,1.23e-13,100;UBERON:0003296,2.38e-10,4;UBERON:0010133,2.38e-10,4;UBERON:0002384,6.95e-08,371;UBERON:0003081,7.14e-08,203 | |||
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| |||
|short_description=p1@AK125933 | |||
}} |
Revision as of 00:05, 11 September 2013
Short description: | p1@AK125933 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK125933_5end |
Coexpression cluster: | C450_Eosinophils_Basophils_CD14_Neutrophils_CD14CD16_Peripheral_immature |
Association with transcript: | 106bp_to_AK125933_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-22 | 98 |
blood island | 1.28e-22 | 98 |
bone marrow | 3.14e-20 | 76 |
hemolymphoid system | 1.08e-19 | 108 |
bone element | 3.26e-18 | 82 |
skeletal element | 6.01e-16 | 90 |
immune system | 3.36e-15 | 93 |
skeletal system | 1.23e-13 | 100 |
gland of diencephalon | 2.38e-10 | 4 |
neuroendocrine gland | 2.38e-10 | 4 |
connective tissue | 6.95e-08 | 371 |
lateral plate mesoderm | 7.14e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.