FFCP PHASE1:Hg19::chr12:7063296..7063308,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C7|description=CAGE_peak_at_chr12:7063296..7063308,+|id=chr12:7063296..7063308,+|ontology_enrichment_celltype=CL:0002057!2.17e-70!42;CL:0000860!4.29e-65!45;CL:0000766!5.07e-59!76;CL:0002032!6.24e-59!165;CL:0000837!6.24e-59!165;CL:0000037!3.53e-58!172;CL:0000566!3.53e-58!172;CL:0000557!4.76e-57!71;CL:0000763!8.70e-55!112;CL:0000049!8.70e-55!112;CL:0000738!9.09e-55!140;CL:0000839!1.01e-54!70;CL:0000988!2.93e-54!182;CL:0002031!4.41e-53!124;CL:0002194!7.04e-46!63;CL:0000576!7.04e-46!63;CL:0000040!7.04e-46!63;CL:0000559!7.04e-46!63;CL:0002009!3.28e-44!65;CL:0002087!3.48e-44!119;CL:0000134!6.07e-21!358;CL:0002320!2.81e-20!365;CL:0000219!6.21e-18!390;CL:0000048!3.97e-15!430;CL:0000723!9.96e-15!436;CL:0002274!1.58e-14!5;CL:0000457!1.58e-14!5;CL:0002191!1.58e-14!5;CL:0000097!1.58e-14!5;CL:0000831!1.58e-14!5;CL:0002028!1.58e-14!5;CL:0000034!3.26e-14!444;CL:0000875!1.79e-09!3;CL:0002396!1.79e-09!3;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9;CL:0000163!6.13e-08!9;CL:0000063!1.12e-07!578;CL:0002371!3.99e-07!591;CL:0000945!5.85e-07!24;CL:0000826!5.85e-07!24;CL:0000838!8.54e-07!52|ontology_enrichment_celltype_v019=CL:0000860;2.62e-81;33!CL:0002057;2.62e-81;33!CL:0000473;4.00e-59;39!CL:0000234;4.00e-59;39!CL:0000576;7.13e-38;48!CL:0000766;3.37e-23;69!CL:0000763;3.15e-13;100!CL:0002087;2.16e-12;104!CL:0000738;6.90e-09;136!CL:0002032;5.43e-08;1!CL:0000557;5.43e-08;1|ontology_enrichment_celltype_v019_2=CL:0000860,3.05e-69,42;CL:0002057,3.05e-69,42;CL:0000473,4.17e-60,48;CL:0000234,4.17e-60,48;CL:0002194,2.62e-47,59;CL:0000576,2.62e-47,59;CL:0000040,2.62e-47,59;CL:0000559,2.62e-47,59;CL:0000766,2.86e-46,72;CL:0002009,1.18e-45,61;CL:0000557,1.94e-45,67;CL:0000839,5.89e-42,66;CL:0002087,5.09e-33,115;CL:0000763,1.97e-32,108;CL:0000049,1.97e-32,108;CL:0000738,2.07e-32,136;CL:0002031,1.79e-31,120;CL:0002032,5.63e-29,161;CL:0000837,5.63e-29,161;CL:0000037,1.38e-27,168;CL:0000988,5.87e-26,177;CL:0000134,1.21e-10,354;CL:0002320,2.43e-10,361;CL:0000219,2.79e-09,386;CL:0000048,5.57e-08,427;CL:0000723,8.44e-08,433;CL:0000034,1.44e-07,441|ontology_enrichment_development_v019=CL:0002057;2.88e-52;42!CL:0000049;8.62e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;5.43e-08;1!DOID:0050177;5.43e-08;1!DOID:0050427;5.43e-08;1|ontology_enrichment_disease_v019_2=DOID:630,5.43e-08,1;DOID:0050177,5.43e-08,1;DOID:0050427,5.43e-08,1|ontology_enrichment_uberon=UBERON:0002371!1.52e-49!80;UBERON:0002390!9.97e-46!102;UBERON:0003061!9.97e-46!102;UBERON:0001474!2.09e-45!86;UBERON:0002193!1.09e-40!112;UBERON:0004765!3.40e-37!101;UBERON:0001434!3.40e-37!101;UBERON:0002405!3.79e-35!115;UBERON:0002384!2.27e-19!375;UBERON:0002204!1.41e-18!167;UBERON:0003081!6.09e-16!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-39,76;UBERON:0001474,1.71e-36,82;UBERON:0004765,6.31e-33,90;UBERON:0002390,6.37e-33,98;UBERON:0003061,6.37e-33,98;UBERON:0002405,9.59e-32,93;UBERON:0002193,1.63e-29,108;UBERON:0001434,2.93e-29,100;UBERON:0002204,6.25e-16,167;UBERON:0003081,9.11e-14,203;UBERON:0002384,6.24e-10,371;UBERON:0000926,2.49e-07,315;UBERON:0004120,2.49e-07,315;UBERON:0006603,2.49e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75088260692625,1.23150884174919,2.67616656466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0.755751887377619,0.242584061187816,1.62700325833979,2.87817521615278,6.50383378879718,17.261543539329,9.99026755463492,10.4052181150977,3.44745680736619,3.87290810150296,12.1883837934908,1.12945403725563,1.09162460023138,1.79778787556068,2.14258724659632,1.28371610830437,5.11469700639233,3.29851300186716,3.59034583718937,2.13112375266347,0,0,0.622822248995575,24.1198718646474,8.34372669472322,18.8954294893451,0,0.736555271975129,0.316462387440884,0.422510572623884,0.425208599930087,0,0,0,0,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.616339038092582,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.215627574859517,0,0,0,0,0,0,2.24702107184155,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:7063296..7063308,+ | |||
|id=chr12:7063296..7063308,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.17e-70!42;CL:0000860!4.29e-65!45;CL:0000766!5.07e-59!76;CL:0002032!6.24e-59!165;CL:0000837!6.24e-59!165;CL:0000037!3.53e-58!172;CL:0000566!3.53e-58!172;CL:0000557!4.76e-57!71;CL:0000763!8.70e-55!112;CL:0000049!8.70e-55!112;CL:0000738!9.09e-55!140;CL:0000839!1.01e-54!70;CL:0000988!2.93e-54!182;CL:0002031!4.41e-53!124;CL:0002194!7.04e-46!63;CL:0000576!7.04e-46!63;CL:0000040!7.04e-46!63;CL:0000559!7.04e-46!63;CL:0002009!3.28e-44!65;CL:0002087!3.48e-44!119;CL:0000134!6.07e-21!358;CL:0002320!2.81e-20!365;CL:0000219!6.21e-18!390;CL:0000048!3.97e-15!430;CL:0000723!9.96e-15!436;CL:0002274!1.58e-14!5;CL:0000457!1.58e-14!5;CL:0002191!1.58e-14!5;CL:0000097!1.58e-14!5;CL:0000831!1.58e-14!5;CL:0002028!1.58e-14!5;CL:0000034!3.26e-14!444;CL:0000875!1.79e-09!3;CL:0002396!1.79e-09!3;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9;CL:0000163!6.13e-08!9;CL:0000063!1.12e-07!578;CL:0002371!3.99e-07!591;CL:0000945!5.85e-07!24;CL:0000826!5.85e-07!24;CL:0000838!8.54e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-81;33!CL:0002057;2.62e-81;33!CL:0000473;4.00e-59;39!CL:0000234;4.00e-59;39!CL:0000576;7.13e-38;48!CL:0000766;3.37e-23;69!CL:0000763;3.15e-13;100!CL:0002087;2.16e-12;104!CL:0000738;6.90e-09;136!CL:0002032;5.43e-08;1!CL:0000557;5.43e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.05e-69,42;CL:0002057,3.05e-69,42;CL:0000473,4.17e-60,48;CL:0000234,4.17e-60,48;CL:0002194,2.62e-47,59;CL:0000576,2.62e-47,59;CL:0000040,2.62e-47,59;CL:0000559,2.62e-47,59;CL:0000766,2.86e-46,72;CL:0002009,1.18e-45,61;CL:0000557,1.94e-45,67;CL:0000839,5.89e-42,66;CL:0002087,5.09e-33,115;CL:0000763,1.97e-32,108;CL:0000049,1.97e-32,108;CL:0000738,2.07e-32,136;CL:0002031,1.79e-31,120;CL:0002032,5.63e-29,161;CL:0000837,5.63e-29,161;CL:0000037,1.38e-27,168;CL:0000988,5.87e-26,177;CL:0000134,1.21e-10,354;CL:0002320,2.43e-10,361;CL:0000219,2.79e-09,386;CL:0000048,5.57e-08,427;CL:0000723,8.44e-08,433;CL:0000034,1.44e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-52;42!CL:0000049;8.62e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;5.43e-08;1!DOID:0050177;5.43e-08;1!DOID:0050427;5.43e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.43e-08,1;DOID:0050177,5.43e-08,1;DOID:0050427,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.52e-49!80;UBERON:0002390!9.97e-46!102;UBERON:0003061!9.97e-46!102;UBERON:0001474!2.09e-45!86;UBERON:0002193!1.09e-40!112;UBERON:0004765!3.40e-37!101;UBERON:0001434!3.40e-37!101;UBERON:0002405!3.79e-35!115;UBERON:0002384!2.27e-19!375;UBERON:0002204!1.41e-18!167;UBERON:0003081!6.09e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-39,76;UBERON:0001474,1.71e-36,82;UBERON:0004765,6.31e-33,90;UBERON:0002390,6.37e-33,98;UBERON:0003061,6.37e-33,98;UBERON:0002405,9.59e-32,93;UBERON:0002193,1.63e-29,108;UBERON:0001434,2.93e-29,100;UBERON:0002204,6.25e-16,167;UBERON:0003081,9.11e-14,203;UBERON:0002384,6.24e-10,371;UBERON:0000926,2.49e-07,315;UBERON:0004120,2.49e-07,315;UBERON:0006603,2.49e-07,315 | |||
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|short_description=p@chr12:7063296..7063308,+ | |||
}} |
Revision as of 00:17, 11 September 2013
Short description: | p@chr12:7063296..7063308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:7063296..7063308, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.05e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-69 | 42 |
defensive cell | 4.17e-60 | 48 |
phagocyte | 4.17e-60 | 48 |
monopoietic cell | 2.62e-47 | 59 |
monocyte | 2.62e-47 | 59 |
monoblast | 2.62e-47 | 59 |
promonocyte | 2.62e-47 | 59 |
myeloid leukocyte | 2.86e-46 | 72 |
macrophage dendritic cell progenitor | 1.18e-45 | 61 |
granulocyte monocyte progenitor cell | 1.94e-45 | 67 |
myeloid lineage restricted progenitor cell | 5.89e-42 | 66 |
nongranular leukocyte | 5.09e-33 | 115 |
myeloid cell | 1.97e-32 | 108 |
common myeloid progenitor | 1.97e-32 | 108 |
leukocyte | 2.07e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 1.79e-31 | 120 |
hematopoietic oligopotent progenitor cell | 5.63e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.63e-29 | 161 |
hematopoietic stem cell | 1.38e-27 | 168 |
hematopoietic cell | 5.87e-26 | 177 |
mesenchymal cell | 1.21e-10 | 354 |
connective tissue cell | 2.43e-10 | 361 |
motile cell | 2.79e-09 | 386 |
multi fate stem cell | 5.57e-08 | 427 |
somatic stem cell | 8.44e-08 | 433 |
stem cell | 1.44e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-39 | 76 |
bone element | 1.71e-36 | 82 |
skeletal element | 6.31e-33 | 90 |
hematopoietic system | 6.37e-33 | 98 |
blood island | 6.37e-33 | 98 |
immune system | 9.59e-32 | 93 |
hemolymphoid system | 1.63e-29 | 108 |
skeletal system | 2.93e-29 | 100 |
musculoskeletal system | 6.25e-16 | 167 |
lateral plate mesoderm | 9.11e-14 | 203 |
connective tissue | 6.24e-10 | 371 |
mesoderm | 2.49e-07 | 315 |
mesoderm-derived structure | 2.49e-07 | 315 |
presumptive mesoderm | 2.49e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.43e-08 | 1 |
monogenic disease | 5.43e-08 | 1 |
xeroderma pigmentosum | 5.43e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.