FFCP PHASE1:Hg19::chr13:27745936..27745961,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20485 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=67bp_to_uc001uqy.2_5end | |||
|coexpression_cluster_id=C3023 | |||
|description=CAGE_peak_1_at_USP12_5end | |||
|id=chr13:27745936..27745961,- | |||
|ontology_enrichment_celltype=CL:0000738!7.84e-32!140;CL:0000037!8.39e-30!172;CL:0000566!8.39e-30!172;CL:0002032!4.45e-28!165;CL:0000837!4.45e-28!165;CL:0000988!2.85e-27!182;CL:0002031!4.53e-27!124;CL:0000766!7.95e-26!76;CL:0000763!1.72e-24!112;CL:0000049!1.72e-24!112;CL:0000557!3.38e-24!71;CL:0000839!1.06e-23!70;CL:0002087!1.62e-23!119;CL:0002057!4.75e-22!42;CL:0002009!1.42e-21!65;CL:0002194!2.21e-20!63;CL:0000576!2.21e-20!63;CL:0000040!2.21e-20!63;CL:0000559!2.21e-20!63;CL:0000860!1.53e-19!45;CL:0000134!9.77e-10!358;CL:0002320!6.12e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-17;33!CL:0002057;1.64e-17;33!CL:0000473;1.80e-15;39!CL:0000234;1.80e-15;39!CL:0000576;4.97e-13;48!CL:0000766;3.99e-12;69!CL:0002087;7.21e-08;104!CL:0000738;7.91e-08;136!CL:0000763;5.46e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.34e-33,136;CL:0000037,8.66e-31,168;CL:0002032,4.69e-29,161;CL:0000837,4.69e-29,161;CL:0002031,2.69e-28,120;CL:0000988,4.58e-28,177;CL:0000766,1.15e-27,72;CL:0000557,4.78e-26,67;CL:0000763,9.97e-26,108;CL:0000049,9.97e-26,108;CL:0000839,1.54e-25,66;CL:0002087,1.19e-24,115;CL:0002009,2.18e-23,61;CL:0000473,6.51e-23,48;CL:0000234,6.51e-23,48;CL:0002194,3.73e-22,59;CL:0000576,3.73e-22,59;CL:0000040,3.73e-22,59;CL:0000559,3.73e-22,59;CL:0000860,4.75e-22,42;CL:0002057,4.75e-22,42;CL:0000134,4.74e-10,354;CL:0002320,3.26e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.34e-16;42!CL:0000049;1.32e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.93e-29!102;UBERON:0003061!3.93e-29!102;UBERON:0002193!2.56e-26!112;UBERON:0002371!5.85e-21!80;UBERON:0001474!4.40e-20!86;UBERON:0004765!1.95e-16!101;UBERON:0001434!1.95e-16!101;UBERON:0002405!7.42e-15!115;UBERON:0000178!1.68e-10!15;UBERON:0000179!1.68e-10!15;UBERON:0000463!1.68e-10!15;UBERON:0003081!3.17e-09!216;UBERON:0002384!5.76e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.66e-10;15!UBERON:0000179;1.66e-10;15!UBERON:0000463;1.66e-10;15 | |||
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| |||
|short_description=p1@USP12 | |||
}} |
Revision as of 01:52, 11 September 2013
Short description: | p1@USP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_USP12_5end |
Coexpression cluster: | C3023_Whole_CD14_Reticulocytes_Neutrophils_blood_Eosinophils_immature |
Association with transcript: | 67bp_to_uc001uqy.2_5end |
EntrezGene: | USP12 |
HGNC: | 20485 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.34e-33 | 136 |
hematopoietic stem cell | 8.66e-31 | 168 |
hematopoietic oligopotent progenitor cell | 4.69e-29 | 161 |
hematopoietic multipotent progenitor cell | 4.69e-29 | 161 |
hematopoietic lineage restricted progenitor cell | 2.69e-28 | 120 |
hematopoietic cell | 4.58e-28 | 177 |
myeloid leukocyte | 1.15e-27 | 72 |
granulocyte monocyte progenitor cell | 4.78e-26 | 67 |
myeloid cell | 9.97e-26 | 108 |
common myeloid progenitor | 9.97e-26 | 108 |
myeloid lineage restricted progenitor cell | 1.54e-25 | 66 |
nongranular leukocyte | 1.19e-24 | 115 |
macrophage dendritic cell progenitor | 2.18e-23 | 61 |
defensive cell | 6.51e-23 | 48 |
phagocyte | 6.51e-23 | 48 |
monopoietic cell | 3.73e-22 | 59 |
monocyte | 3.73e-22 | 59 |
monoblast | 3.73e-22 | 59 |
promonocyte | 3.73e-22 | 59 |
classical monocyte | 4.75e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.75e-22 | 42 |
mesenchymal cell | 4.74e-10 | 354 |
connective tissue cell | 3.26e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-30 | 98 |
blood island | 1.08e-30 | 98 |
hemolymphoid system | 1.24e-27 | 108 |
bone marrow | 2.01e-22 | 76 |
bone element | 2.10e-21 | 82 |
immune system | 2.33e-19 | 93 |
skeletal element | 1.37e-16 | 90 |
skeletal system | 2.13e-15 | 100 |
lateral plate mesoderm | 3.35e-12 | 203 |
blood | 1.68e-10 | 15 |
haemolymphatic fluid | 1.68e-10 | 15 |
organism substance | 1.68e-10 | 15 |
connective tissue | 3.10e-08 | 371 |
mesoderm | 5.15e-07 | 315 |
mesoderm-derived structure | 5.15e-07 | 315 |
presumptive mesoderm | 5.15e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.