FFCP PHASE1:Hg19::chr14:36982707..36982717,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18387|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000518987_5end|coexpression_cluster_id=C3425|description=CAGE_peak_8_at_SFTA3_5end|id=chr14:36982707..36982717,-|ontology_enrichment_celltype=CL:0000167!1.33e-10!1;CL:0000164!1.33e-10!1;CL:0000502!1.33e-10!1;CL:0000172!1.33e-10!1;CL:0000173!1.33e-10!1;CL:0002351!1.33e-10!1;CL:0002202!5.05e-10!9;CL:0002632!5.05e-10!9;CL:0000082!2.40e-08!19;CL:0002368!4.33e-07!13|ontology_enrichment_celltype_v019=CL:0000082;2.28e-12;19!CL:0000322;1.67e-09;3|ontology_enrichment_celltype_v019_2=CL:0000082,2.33e-12,19;CL:0000322,1.54e-09,3|ontology_enrichment_development_v019=UBERON:0008947;1.64e-21;29!UBERON:0007123;7.35e-21;5!UBERON:0001041;8.30e-21;30!UBERON:0009847;1.24e-09;3!UBERON:0003353;1.24e-09;3!UBERON:0006595;7.35e-07;86|ontology_enrichment_disease=DOID:3112!3.08e-11!1;DOID:4430!1.33e-10!1;DOID:3905!2.53e-10!9;DOID:3908!1.01e-08!5|ontology_enrichment_disease_v019=DOID:3112;4.06e-26;1!DOID:3905;3.04e-25;9!DOID:3908;1.48e-20;5!DOID:1324;1.80e-15;15!DOID:1325;4.22e-15;7!DOID:3904;4.22e-15;7!DOID:0050615;1.50e-14;16!DOID:3910;1.37e-13;2!DOID:4556;1.67e-09;3!DOID:5409;1.54e-07;4|ontology_enrichment_disease_v019_2=DOID:3112,3.58e-26,1;DOID:3905,3.17e-25,9;DOID:3908,1.34e-20,5;DOID:1324,1.85e-15,15;DOID:1325,4.37e-15,7;DOID:3904,4.37e-15,7;DOID:0050615,1.53e-14,16;DOID:3910,1.21e-13,2;DOID:4556,1.67e-09,3;DOID:5409,1.69e-07,4|ontology_enrichment_uberon=UBERON:0002046!7.20e-31!5;UBERON:0004117!7.20e-31!5;UBERON:0007689!7.20e-31!5;UBERON:0007123!7.20e-31!5;UBERON:0003091!7.20e-31!5;UBERON:0005178!1.37e-21!34;UBERON:0002224!1.37e-21!34;UBERON:0005181!6.10e-21!35;UBERON:0002048!7.66e-21!22;UBERON:0000117!7.66e-21!22;UBERON:0000171!7.66e-21!22;UBERON:0000170!7.66e-21!22;UBERON:0005597!7.66e-21!22;UBERON:0000118!7.66e-21!22;UBERON:0008947!3.40e-19!38;UBERON:0003258!3.40e-19!38;UBERON:0005153!8.41e-16!37;UBERON:0005911!4.73e-15!82;UBERON:0009722!3.40e-14!11;UBERON:0007690!3.40e-14!11;UBERON:0000915!1.06e-13!52;UBERON:0000065!2.02e-13!53;UBERON:0005157!3.40e-11!51;UBERON:0007196!5.01e-11!14;UBERON:0001558!5.01e-11!14;UBERON:0002171!5.05e-11!1;UBERON:0006518!5.05e-11!1;UBERON:0008949!5.05e-11!1;UBERON:0000101!5.05e-11!1;UBERON:0002167!5.05e-11!1;UBERON:0008814!1.83e-10!15;UBERON:0001007!8.47e-10!155;UBERON:0001555!8.47e-10!155;UBERON:0007026!8.47e-10!155;UBERON:0001004!1.49e-09!72;UBERON:0004119!8.43e-09!169;UBERON:0000925!8.43e-09!169;UBERON:0006595!8.43e-09!169;UBERON:0004802!2.40e-08!19;UBERON:0000115!2.40e-08!19;UBERON:0001048!1.54e-07!168;UBERON:0000072!4.88e-07!46|ontology_enrichment_uberon_v019=UBERON:0002048;3.19e-28;22!UBERON:0000117;3.19e-28;22!UBERON:0000171;3.19e-28;22!UBERON:0000170;3.19e-28;22!UBERON:0002171;9.79e-26;1!UBERON:0006518;9.79e-26;1!UBERON:0008949;9.79e-26;1!UBERON:0000101;9.79e-26;1!UBERON:0002167;9.79e-26;1!UBERON:0002046;7.35e-21;5!UBERON:0005178;2.16e-15;34!UBERON:0002224;2.16e-15;34!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0005181;1.48e-13;35!UBERON:0004802;2.28e-12;19!UBERON:0000115;2.28e-12;19!UBERON:0004807;8.91e-11;22!UBERON:0000065;3.50e-10;44!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0000915;9.80e-08;52!UBERON:0001004;1.67e-07;65!UBERON:0009856;1.92e-07;4!UBERON:0005911;6.58e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.47e-28,22;UBERON:0000117,3.47e-28,22;UBERON:0000171,3.47e-28,22;UBERON:0000170,3.47e-28,22;UBERON:0005597,3.47e-28,22;UBERON:0000118,3.47e-28,22;UBERON:0002171,1.26e-25,1;UBERON:0006518,1.26e-25,1;UBERON:0008949,1.26e-25,1;UBERON:0000101,1.26e-25,1;UBERON:0002167,1.26e-25,1;UBERON:0005153,4.08e-24,37;UBERON:0002046,7.35e-21,5;UBERON:0004117,7.35e-21,5;UBERON:0007689,7.35e-21,5;UBERON:0007123,7.35e-21,5;UBERON:0003091,7.35e-21,5;UBERON:0005911,2.63e-19,82;UBERON:0005157,4.89e-19,47;UBERON:0005178,2.22e-18,34;UBERON:0002224,2.22e-18,34;UBERON:0005181,7.28e-18,35;UBERON:0008947,1.76e-16,38;UBERON:0003258,1.76e-16,38;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0004802,2.33e-12,19;UBERON:0000115,2.33e-12,19;UBERON:0000915,4.02e-12,52;UBERON:0000065,1.11e-11,54;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0009722,4.83e-10,11;UBERON:0007690,4.83e-10,11;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3;UBERON:0004807,1.33e-08,28;UBERON:0001004,1.39e-08,74;UBERON:0004921,1.43e-07,118;UBERON:0001048,1.44e-07,160;UBERON:0001041,2.53e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77977555204936,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47840471127169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,3.61569901729232,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62035068016155,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,2.71845834033127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2644426535001,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,2.4669009767735,0.445530107947154,0.202117188958219,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@SFTA3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=253970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000518987_5end | |||
|coexpression_cluster_id=C3425 | |||
|description=CAGE_peak_8_at_SFTA3_5end | |||
|id=chr14:36982707..36982717,- | |||
|ontology_enrichment_celltype=CL:0000167!1.33e-10!1;CL:0000164!1.33e-10!1;CL:0000502!1.33e-10!1;CL:0000172!1.33e-10!1;CL:0000173!1.33e-10!1;CL:0002351!1.33e-10!1;CL:0002202!5.05e-10!9;CL:0002632!5.05e-10!9;CL:0000082!2.40e-08!19;CL:0002368!4.33e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000082;2.28e-12;19!CL:0000322;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,2.33e-12,19;CL:0000322,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.64e-21;29!UBERON:0007123;7.35e-21;5!UBERON:0001041;8.30e-21;30!UBERON:0009847;1.24e-09;3!UBERON:0003353;1.24e-09;3!UBERON:0006595;7.35e-07;86 | |||
|ontology_enrichment_disease=DOID:3112!3.08e-11!1;DOID:4430!1.33e-10!1;DOID:3905!2.53e-10!9;DOID:3908!1.01e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:3112;4.06e-26;1!DOID:3905;3.04e-25;9!DOID:3908;1.48e-20;5!DOID:1324;1.80e-15;15!DOID:1325;4.22e-15;7!DOID:3904;4.22e-15;7!DOID:0050615;1.50e-14;16!DOID:3910;1.37e-13;2!DOID:4556;1.67e-09;3!DOID:5409;1.54e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.58e-26,1;DOID:3905,3.17e-25,9;DOID:3908,1.34e-20,5;DOID:1324,1.85e-15,15;DOID:1325,4.37e-15,7;DOID:3904,4.37e-15,7;DOID:0050615,1.53e-14,16;DOID:3910,1.21e-13,2;DOID:4556,1.67e-09,3;DOID:5409,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002046!7.20e-31!5;UBERON:0004117!7.20e-31!5;UBERON:0007689!7.20e-31!5;UBERON:0007123!7.20e-31!5;UBERON:0003091!7.20e-31!5;UBERON:0005178!1.37e-21!34;UBERON:0002224!1.37e-21!34;UBERON:0005181!6.10e-21!35;UBERON:0002048!7.66e-21!22;UBERON:0000117!7.66e-21!22;UBERON:0000171!7.66e-21!22;UBERON:0000170!7.66e-21!22;UBERON:0005597!7.66e-21!22;UBERON:0000118!7.66e-21!22;UBERON:0008947!3.40e-19!38;UBERON:0003258!3.40e-19!38;UBERON:0005153!8.41e-16!37;UBERON:0005911!4.73e-15!82;UBERON:0009722!3.40e-14!11;UBERON:0007690!3.40e-14!11;UBERON:0000915!1.06e-13!52;UBERON:0000065!2.02e-13!53;UBERON:0005157!3.40e-11!51;UBERON:0007196!5.01e-11!14;UBERON:0001558!5.01e-11!14;UBERON:0002171!5.05e-11!1;UBERON:0006518!5.05e-11!1;UBERON:0008949!5.05e-11!1;UBERON:0000101!5.05e-11!1;UBERON:0002167!5.05e-11!1;UBERON:0008814!1.83e-10!15;UBERON:0001007!8.47e-10!155;UBERON:0001555!8.47e-10!155;UBERON:0007026!8.47e-10!155;UBERON:0001004!1.49e-09!72;UBERON:0004119!8.43e-09!169;UBERON:0000925!8.43e-09!169;UBERON:0006595!8.43e-09!169;UBERON:0004802!2.40e-08!19;UBERON:0000115!2.40e-08!19;UBERON:0001048!1.54e-07!168;UBERON:0000072!4.88e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;3.19e-28;22!UBERON:0000117;3.19e-28;22!UBERON:0000171;3.19e-28;22!UBERON:0000170;3.19e-28;22!UBERON:0002171;9.79e-26;1!UBERON:0006518;9.79e-26;1!UBERON:0008949;9.79e-26;1!UBERON:0000101;9.79e-26;1!UBERON:0002167;9.79e-26;1!UBERON:0002046;7.35e-21;5!UBERON:0005178;2.16e-15;34!UBERON:0002224;2.16e-15;34!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0005181;1.48e-13;35!UBERON:0004802;2.28e-12;19!UBERON:0000115;2.28e-12;19!UBERON:0004807;8.91e-11;22!UBERON:0000065;3.50e-10;44!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0000915;9.80e-08;52!UBERON:0001004;1.67e-07;65!UBERON:0009856;1.92e-07;4!UBERON:0005911;6.58e-07;36 | |||
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|short_description=p8@SFTA3 | |||
}} |
Revision as of 04:27, 11 September 2013
Short description: | p8@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SFTA3_5end |
Coexpression cluster: | C3425_prostate_papillary_bronchioalveolar_small_lung_thyroid_nonsmall |
Association with transcript: | 0bp_to_ENST00000518987_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 2.33e-12 | 19 |
pneumocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.58e-26 | 1 |
lung carcinoma | 3.17e-25 | 9 |
non-small cell lung carcinoma | 1.34e-20 | 5 |
lung cancer | 1.85e-15 | 15 |
bronchus cancer | 4.37e-15 | 7 |
bronchogenic carcinoma | 4.37e-15 | 7 |
respiratory system cancer | 1.53e-14 | 16 |
lung adenocarcinoma | 1.21e-13 | 2 |
lung large cell carcinoma | 1.67e-09 | 3 |
lung small cell carcinoma | 1.69e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.