FFCP PHASE1:Hg19::chr17:19314432..19314443,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7732|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12968|TSSclassifier=S|UniProt=Q7Z5V9|association_with_transcript=-47bp_to_NM_007148_5end|coexpression_cluster_id=C35|description=CAGE_peak_7_at_RNF112_5end|id=chr17:19314432..19314443,+|ontology_enrichment_celltype=CL:0002605!5.73e-10!3|ontology_enrichment_celltype_v019=CL:0000333;8.29e-11;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;1.56e-26;2!UBERON:0006215;1.17e-17;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;3.71e-09;6|ontology_enrichment_disease_v019_2=DOID:169,4.74e-09,6|ontology_enrichment_uberon=UBERON:0001049!1.15e-91!57;UBERON:0005068!1.15e-91!57;UBERON:0006241!1.15e-91!57;UBERON:0007135!1.15e-91!57;UBERON:0002616!2.62e-79!59;UBERON:0000073!3.37e-79!94;UBERON:0001016!3.37e-79!94;UBERON:0002780!1.57e-78!41;UBERON:0001890!1.57e-78!41;UBERON:0006240!1.57e-78!41;UBERON:0001017!7.99e-78!82;UBERON:0005743!4.43e-77!86;UBERON:0003080!1.69e-76!42;UBERON:0002020!1.32e-73!34;UBERON:0003528!1.32e-73!34;UBERON:0001893!2.35e-73!34;UBERON:0000955!2.93e-73!69;UBERON:0006238!2.93e-73!69;UBERON:0001869!6.88e-73!32;UBERON:0002791!1.07e-70!33;UBERON:0003075!8.66e-64!86;UBERON:0007284!8.66e-64!86;UBERON:0002346!1.65e-60!90;UBERON:0003056!1.48e-53!61;UBERON:0000956!6.18e-51!25;UBERON:0000203!6.18e-51!25;UBERON:0007023!2.70e-45!115;UBERON:0000033!2.20e-43!123;UBERON:0000153!4.96e-43!129;UBERON:0007811!4.96e-43!129;UBERON:0002619!8.91e-43!22;UBERON:0004121!2.37e-41!169;UBERON:0000924!3.85e-40!173;UBERON:0006601!3.85e-40!173;UBERON:0001950!1.09e-36!20;UBERON:0002420!1.00e-24!9;UBERON:0007245!1.00e-24!9;UBERON:0010009!1.00e-24!9;UBERON:0010011!1.00e-24!9;UBERON:0000454!1.00e-24!9;UBERON:0002308!8.25e-24!9;UBERON:0000125!8.25e-24!9;UBERON:0000025!1.96e-22!194;UBERON:0001871!2.81e-20!7;UBERON:0009663!3.36e-18!7;UBERON:0004111!4.58e-18!241;UBERON:0000349!5.96e-18!5;UBERON:0003076!2.87e-16!15;UBERON:0003057!2.87e-16!15;UBERON:0000369!4.75e-15!4;UBERON:0002435!4.75e-15!4;UBERON:0000204!4.75e-15!4;UBERON:0010082!4.75e-15!4;UBERON:0000477!1.83e-14!286;UBERON:0000064!3.65e-14!219;UBERON:0000200!3.21e-13!6;UBERON:0002680!7.28e-13!9;UBERON:0001895!7.28e-13!9;UBERON:0010092!7.28e-13!9;UBERON:0000475!9.65e-13!365;UBERON:0000483!1.40e-12!309;UBERON:0004733!1.66e-12!12;UBERON:0002028!1.66e-12!12;UBERON:0007277!1.66e-12!12;UBERON:0000119!2.35e-12!312;UBERON:0005383!6.16e-12!3;UBERON:0005382!6.16e-12!3;UBERON:0004732!1.82e-11!13;UBERON:0002021!1.13e-10!5;UBERON:0002771!1.17e-10!3;UBERON:0000988!6.10e-10!3;UBERON:0001873!1.61e-08!2;UBERON:0010122!1.61e-08!2;UBERON:0001876!2.30e-08!2;UBERON:0001954!3.62e-08!2;UBERON:0003022!3.62e-08!2;UBERON:0002421!3.62e-08!2;UBERON:0002600!3.62e-08!2;UBERON:0001875!4.94e-08!2;UBERON:0006514!4.94e-08!2;UBERON:0001894!1.20e-07!7;UBERON:0006222!1.20e-07!7;UBERON:0000062!2.19e-07!511;UBERON:0002148!2.46e-07!2;UBERON:0009662!2.46e-07!2;UBERON:0000481!3.17e-07!347;UBERON:0000923!3.29e-07!604;UBERON:0005291!3.29e-07!604;UBERON:0006598!3.29e-07!604;UBERON:0002532!3.29e-07!604;UBERON:0002050!3.55e-07!605;UBERON:0005423!3.55e-07!605;UBERON:0000467!3.82e-07!625;UBERON:0000480!4.12e-07!626;UBERON:0000922!6.05e-07!612;UBERON:0000013!6.77e-07!5;UBERON:0002410!6.77e-07!5|ontology_enrichment_uberon_v019=UBERON:0002420;8.31e-50;9!UBERON:0007245;8.31e-50;9!UBERON:0010009;8.31e-50;9!UBERON:0010011;8.31e-50;9!UBERON:0000454;8.31e-50;9!UBERON:0000349;1.07e-39;5!UBERON:0005383;7.07e-39;3!UBERON:0005382;7.07e-39;3!UBERON:0000369;2.35e-29;4!UBERON:0002435;2.35e-29;4!UBERON:0000204;2.35e-29;4!UBERON:0009663;3.56e-29;7!UBERON:0002791;1.30e-28;32!UBERON:0001869;2.56e-27;32!UBERON:0001873;1.56e-26;2!UBERON:0003528;3.90e-26;34!UBERON:0002020;3.90e-26;34!UBERON:0001876;7.66e-26;2!UBERON:0001954;1.63e-25;2!UBERON:0003022;1.63e-25;2!UBERON:0002421;1.63e-25;2!UBERON:0002600;1.63e-25;2!UBERON:0000125;8.84e-23;9!UBERON:0002308;8.84e-23;9!UBERON:0001893;3.17e-21;34!UBERON:0002780;1.11e-19;41!UBERON:0001890;1.11e-19;41!UBERON:0000955;1.13e-19;68!UBERON:0000073;4.39e-15;53!UBERON:0002616;4.39e-15;53!UBERON:0001874;3.50e-14;1!UBERON:0001016;5.32e-14;83!UBERON:0002619;2.09e-13;22!UBERON:0001017;6.27e-13;75!UBERON:0000956;7.42e-12;25!UBERON:0000203;7.42e-12;25!UBERON:0000013;8.29e-11;5!UBERON:0002410;8.29e-11;5!UBERON:0002037;2.66e-09;6!UBERON:0001871;4.58e-08;6!UBERON:0011216;1.40e-07;132!UBERON:0001875;1.81e-07;2!UBERON:0006514;1.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002420,5.47e-50,9;UBERON:0007245,5.47e-50,9;UBERON:0010009,5.47e-50,9;UBERON:0010011,5.47e-50,9;UBERON:0000454,5.47e-50,9;UBERON:0000349,1.18e-39,5;UBERON:0005383,6.65e-39,3;UBERON:0005382,6.65e-39,3;UBERON:0001016,8.24e-33,89;UBERON:0002791,1.38e-29,32;UBERON:0001869,1.38e-29,32;UBERON:0000369,2.25e-29,4;UBERON:0002435,2.25e-29,4;UBERON:0000204,2.25e-29,4;UBERON:0010082,2.25e-29,4;UBERON:0009663,3.09e-29,7;UBERON:0000955,1.73e-28,68;UBERON:0006238,1.73e-28,68;UBERON:0003528,7.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7732 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12968 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z5V9 | |||
|association_with_transcript=-47bp_to_NM_007148_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_7_at_RNF112_5end | |||
|id=chr17:19314432..19314443,+ | |||
|ontology_enrichment_celltype=CL:0002605!5.73e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;8.29e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.56e-26;2!UBERON:0006215;1.17e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.71e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.74e-09,6 | |||
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|short_description=p7@RNF112 | |||
}} |
Revision as of 12:32, 11 September 2013
Short description: | p7@RNF112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RNF112_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -47bp_to_NM_007148_5end |
EntrezGene: | RNF112 |
HGNC: | 12968 |
UniProt: | Q7Z5V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.74e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.