FFCP PHASE1:Hg19::chr19:3620703..3620705,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58509|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29938|TSSclassifier=W|UniProt=|association_with_transcript=-433bp_to_uc010xhp.1_5end|coexpression_cluster_id=C193|description=CAGE_peak_2_at_C19orf29_5end|id=chr19:3620703..3620705,-|ontology_enrichment_celltype=CL:0000055!2.75e-07!180|ontology_enrichment_celltype_v019=CL:0000669;8.17e-10;4!CL:1000746;2.79e-09;7!CL:1000612;2.79e-09;7!CL:0000650;6.20e-09;2!CL:1000500;6.20e-09;2!CL:1000618;6.20e-09;2!CL:1001318;6.20e-09;2!CL:0002173;6.20e-09;2!CL:0000192;7.24e-09;43|ontology_enrichment_celltype_v019_2=CL:0000192,3.83e-11,43;CL:0000514,3.83e-11,43;CL:0000669,1.11e-09,4;CL:1000746,2.75e-09,7;CL:1000612,2.75e-09,7;CL:0000650,8.97e-09,2;CL:1000500,8.97e-09,2;CL:1000618,8.97e-09,2;CL:1001318,8.97e-09,2;CL:0002173,8.97e-09,2;CL:0000187,3.57e-08,55;CL:0000222,9.18e-08,121;CL:0000680,1.26e-07,58;CL:0000056,1.26e-07,58;CL:0000355,1.26e-07,58;CL:0000393,3.91e-07,61;CL:0000211,3.91e-07,61;CL:0000359,4.74e-07,32|ontology_enrichment_development_v019=CL:0000514;7.24e-09;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003891;1.56e-09;4!UBERON:0000074;2.79e-09;7!UBERON:0001229;2.79e-09;7!UBERON:0003567;6.20e-09;2!UBERON:0003838;6.20e-09;2!UBERON:0003586;6.20e-09;2!UBERON:0005169;6.20e-09;2!UBERON:0002321;6.20e-09;2!UBERON:0005215;6.20e-09;2!UBERON:0002303;6.20e-09;2!UBERON:0002319;6.20e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.09e-11,78;UBERON:0010532,2.75e-09,7;UBERON:0000074,2.75e-09,7;UBERON:0001229,2.75e-09,7;UBERON:0001230,2.75e-09,7;UBERON:0003220,2.75e-09,7;UBERON:0005749,2.75e-09,7;UBERON:0004199,2.75e-09,7;UBERON:0004209,2.75e-09,7;UBERON:0004198,2.75e-09,7;UBERON:0003891,2.79e-09,4;UBERON:0007500,4.28e-09,59;UBERON:0001981,4.28e-09,59;UBERON:0004537,4.28e-09,59;UBERON:0006965,4.28e-09,59;UBERON:0000055,6.94e-09,68;UBERON:0003567,8.97e-09,2;UBERON:0003838,8.97e-09,2;UBERON:0003586,8.97e-09,2;UBERON:0005169,8.97e-09,2;UBERON:0002321,8.97e-09,2;UBERON:0005215,8.97e-09,2;UBERON:0002303,8.97e-09,2;UBERON:0002319,8.97e-09,2;UBERON:0003914,2.82e-08,117;UBERON:0005103,3.91e-08,8;UBERON:0000083,3.91e-08,8;UBERON:0009201,3.91e-08,8;UBERON:0006553,3.91e-08,8;UBERON:0003074,3.91e-08,8;UBERON:0003060,3.91e-08,8;UBERON:0004872,6.16e-08,83;UBERON:0002049,2.30e-07,78;UBERON:0007798,2.30e-07,78;UBERON:0000080,3.10e-07,9;UBERON:0002120,3.10e-07,9;UBERON:0004875,3.10e-07,9;UBERON:0005721,3.10e-07,9;UBERON:0005754,3.10e-07,9;UBERON:0007297,3.10e-07,9;UBERON:0001134,5.56e-07,62;UBERON:0002036,5.56e-07,62;UBERON:0003082,5.56e-07,62;UBERON:0004573,6.30e-07,33;UBERON:0004571,6.30e-07,33;UBERON:0002329,6.34e-07,71;UBERON:0003059,6.34e-07,71;UBERON:0007282,6.34e-07,71;UBERON:0004290,6.34e-07,71;UBERON:0009618,6.34e-07,71;UBERON:0003077,8.60e-07,72;UBERON:0007285,8.60e-07,72|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0.873765488520689,0,0.74259811776028,0,0,0,0,0,1.10808952269109,0.816002764977012,0,1.71741592278634,0,0.251085279189606,0.152826811495903,0.0821005894499457,0.157421562627358,0,0.767658796194425,0.154816123316076,2.75826367343678,0.30120591877825,0.739508020333575,0.697204805222715,0.568676929949686,0.880801318004542,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0,0,0.657751618414705,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.567208902984407,0.443458794925128,0.351339142772504,0.392937226493138,2.18577172975525,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0,0.596287222100115,0,2.42998351125316,1.13061588384802,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,2.28081631715554,0,0.367663080345869,0,0.625098097988558,0.44905874525234,0.563057402416611,1.53316637465883,2.84779697870439,0.366403487860815,1.31780417436063,0,0.872188104285069,0,0.12663051166458,0,0,0.354668382198357,0,3.20246987189115,0.49333509683432,0,0.134710672069688,0.326923806226917,0.605429710579726,0.576175924479999,0.468642863667593,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0.140450806702248,1.22492502752936,0,0.103325781175765,0,0.247266929278557,1.82032272387605,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.680593098960126,0,0,0.423863802319124,0,0.206105058476878,0,1.11670113798954,0,0.194874010322397,0,0.644349290496095,0.484938170456436,0,0.705264687593482,1.01736355386293,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0.348581828608555,0,0,0.72995471815166,0,0.6432409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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29938 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-433bp_to_uc010xhp.1_5end | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_2_at_C19orf29_5end | |||
|id=chr19:3620703..3620705,- | |||
|ontology_enrichment_celltype=CL:0000055!2.75e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000669;8.17e-10;4!CL:1000746;2.79e-09;7!CL:1000612;2.79e-09;7!CL:0000650;6.20e-09;2!CL:1000500;6.20e-09;2!CL:1000618;6.20e-09;2!CL:1001318;6.20e-09;2!CL:0002173;6.20e-09;2!CL:0000192;7.24e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.83e-11,43;CL:0000514,3.83e-11,43;CL:0000669,1.11e-09,4;CL:1000746,2.75e-09,7;CL:1000612,2.75e-09,7;CL:0000650,8.97e-09,2;CL:1000500,8.97e-09,2;CL:1000618,8.97e-09,2;CL:1001318,8.97e-09,2;CL:0002173,8.97e-09,2;CL:0000187,3.57e-08,55;CL:0000222,9.18e-08,121;CL:0000680,1.26e-07,58;CL:0000056,1.26e-07,58;CL:0000355,1.26e-07,58;CL:0000393,3.91e-07,61;CL:0000211,3.91e-07,61;CL:0000359,4.74e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;7.24e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.56e-09;4!UBERON:0000074;2.79e-09;7!UBERON:0001229;2.79e-09;7!UBERON:0003567;6.20e-09;2!UBERON:0003838;6.20e-09;2!UBERON:0003586;6.20e-09;2!UBERON:0005169;6.20e-09;2!UBERON:0002321;6.20e-09;2!UBERON:0005215;6.20e-09;2!UBERON:0002303;6.20e-09;2!UBERON:0002319;6.20e-09;2 | |||
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| |||
|short_description=p2@C19orf29 | |||
}} |
Revision as of 20:12, 11 September 2013
Short description: | p2@C19orf29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C19orf29_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -433bp_to_uc010xhp.1_5end |
EntrezGene: | C19orf29 |
HGNC: | 29938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.83e-11 | 43 |
smooth muscle myoblast | 3.83e-11 | 43 |
pericyte cell | 1.11e-09 | 4 |
glomerular cell | 2.75e-09 | 7 |
kidney corpuscule cell | 2.75e-09 | 7 |
mesangial cell | 8.97e-09 | 2 |
kidney interstitial cell | 8.97e-09 | 2 |
juxtaglomerular complex cell | 8.97e-09 | 2 |
renal interstitial pericyte | 8.97e-09 | 2 |
extraglomerular mesangial cell | 8.97e-09 | 2 |
muscle cell | 3.57e-08 | 55 |
mesodermal cell | 9.18e-08 | 121 |
muscle precursor cell | 1.26e-07 | 58 |
myoblast | 1.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-07 | 58 |
electrically responsive cell | 3.91e-07 | 61 |
electrically active cell | 3.91e-07 | 61 |
vascular associated smooth muscle cell | 4.74e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.