FFCP PHASE1:Hg19::chr19:40854508..40854519,+: Difference between revisions
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{{FFCP | 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2820931775404,3.22286590457961,0.236387681767936,0,1.49136876415977,0.942693539496011,0,0,0.431855182437243,0.9555033757741,1.92986669276972,0.316027223465453,0.116241425368125,0.173858272302579,0,1.03608082081518,1.0243108625637,1.38251932362818,0.860454717640555,0.354996002191696,0,1.27016115057279,1.8328549483524,1.24082554265728,0.955538938977433,0.335566295393377,0.098150233615243,0.121917924982269,0,0.718639647993729,3.4794432940146,0,1.40363678077263,0.795803100645473,1.30812099855325,0.79062257427272,0,0.452888530700021,1.46630900405095,1.31135736302374,1.41095188908457,0.735444965261716,2.12108892391463,1.17785080268967,0.594092800654172,2.5359343655004,0.849635573439084,1.59772660565751,1.03132620757723,0.0999411559249289,1.07132363163395,0,1.12337913364836,0.730336388246517,3.66983426723633,0.573358332605805,0.473314686579554,3.87551494088214,3.49080552272302,2.645134202577,1.85997509083376,1.38652688589425,0.865253124247578,0.126166424835079,0.655593431782173,0.380095503034311,1.01988829741982,0.26721740526556,0.275684698604535,0.752122617877125,1.21245917149183,1.60778478093707,1.65833887891756,1.55149493792843,1.0661699095049,0.476128862927481,1.0334225573761,1.05527014302958,1.12131862580613,1.20929600728513,0.808468755832877,0.435433495793923,0,0.606168477131288,1.57788851863888,1.99596213927608,0.732629417498771,0.213454691755431,0,0.359300808426348,4.69281884806909,0.611207220914332,0,0.665756774185513,1.00636896795513,0|short_description=p5@PLD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17158 | |||
|TSSclassifier=S | |||
|UniProt=E2QRD3 | |||
|association_with_transcript=17bp_to_ENST00000392032_5end | |||
|description=CAGE_peak_5_at_PLD3_5end | |||
|id=chr19:40854508..40854519,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.52e-13!42;CL:0000860!1.58e-11!45;CL:0002194!7.21e-08!63;CL:0000576!7.21e-08!63;CL:0000040!7.21e-08!63;CL:0000559!7.21e-08!63;CL:0000766!7.28e-08!76;CL:0002009!3.08e-07!65;CL:0000839!5.97e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-10;33!CL:0002057;2.46e-10;33!CL:0000576;5.43e-08;48!CL:0000473;9.80e-08;39!CL:0000234;9.80e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-13,42;CL:0002057,1.06e-13,42;CL:0000473,3.89e-12,48;CL:0000234,3.89e-12,48;CL:0000766,3.84e-09,72;CL:0002194,4.83e-09,59;CL:0000576,4.83e-09,59;CL:0000040,4.83e-09,59;CL:0000559,4.83e-09,59;CL:0002009,2.49e-08,61;CL:0000839,8.03e-08,66;CL:0000557,1.62e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;8.26e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-15!115;UBERON:0001049!5.24e-12!57;UBERON:0005068!5.24e-12!57;UBERON:0006241!5.24e-12!57;UBERON:0007135!5.24e-12!57;UBERON:0002616!8.07e-12!59;UBERON:0005743!3.53e-10!86;UBERON:0000073!6.83e-10!94;UBERON:0001016!6.83e-10!94;UBERON:0001017!8.71e-10!82;UBERON:0000955!1.32e-09!69;UBERON:0006238!1.32e-09!69;UBERON:0003075!1.41e-09!86;UBERON:0007284!1.41e-09!86;UBERON:0002346!3.65e-09!90;UBERON:0002780!7.05e-09!41;UBERON:0001890!7.05e-09!41;UBERON:0006240!7.05e-09!41;UBERON:0003080!3.78e-08!42;UBERON:0000923!3.86e-08!604;UBERON:0005291!3.86e-08!604;UBERON:0006598!3.86e-08!604;UBERON:0002532!3.86e-08!604;UBERON:0000468!4.12e-08!659;UBERON:0000467!6.58e-08!625;UBERON:0002050!6.76e-08!605;UBERON:0005423!6.76e-08!605;UBERON:0000480!7.02e-08!626;UBERON:0000922!2.64e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.42e-07;53!UBERON:0002616;4.42e-07;53!UBERON:0002780;9.21e-07;41!UBERON:0001890;9.21e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-13,114;UBERON:0001049,5.12e-13,56;UBERON:0005068,5.12e-13,56;UBERON:0006241,5.12e-13,56;UBERON:0007135,5.12e-13,56;UBERON:0000073,8.78e-13,53;UBERON:0002616,8.78e-13,53;UBERON:0001017,3.09e-10,81;UBERON:0001016,5.50e-10,89;UBERON:0000955,1.29e-09,68;UBERON:0006238,1.29e-09,68;UBERON:0002780,3.99e-09,41;UBERON:0001890,3.99e-09,41;UBERON:0003080,3.99e-09,41;UBERON:0006240,3.99e-09,41;UBERON:0003075,4.30e-09,82;UBERON:0007284,4.30e-09,82;UBERON:0002346,2.38e-08,86;UBERON:0000923,2.69e-08,560;UBERON:0010316,2.69e-08,560;UBERON:0005291,2.69e-08,560;UBERON:0006598,2.69e-08,560;UBERON:0010317,2.69e-08,560;UBERON:0002532,2.69e-08,560;UBERON:0002050,7.93e-08,564;UBERON:0002390,2.28e-07,98;UBERON:0003061,2.28e-07,98;UBERON:0005423,3.92e-07,581;UBERON:0001474,4.28e-07,82 | |||
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| |||
|short_description=p5@PLD3 | |||
}} |
Revision as of 20:40, 11 September 2013
Short description: | p5@PLD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PLD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000392032_5end |
EntrezGene: | PLD3 |
HGNC: | 17158 |
UniProt: | E2QRD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-13 | 42 |
defensive cell | 3.89e-12 | 48 |
phagocyte | 3.89e-12 | 48 |
myeloid leukocyte | 3.84e-09 | 72 |
monopoietic cell | 4.83e-09 | 59 |
monocyte | 4.83e-09 | 59 |
monoblast | 4.83e-09 | 59 |
promonocyte | 4.83e-09 | 59 |
macrophage dendritic cell progenitor | 2.49e-08 | 61 |
myeloid lineage restricted progenitor cell | 8.03e-08 | 66 |
granulocyte monocyte progenitor cell | 1.62e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-13 | 114 |
neural tube | 5.12e-13 | 56 |
neural rod | 5.12e-13 | 56 |
future spinal cord | 5.12e-13 | 56 |
neural keel | 5.12e-13 | 56 |
regional part of nervous system | 8.78e-13 | 53 |
regional part of brain | 8.78e-13 | 53 |
central nervous system | 3.09e-10 | 81 |
nervous system | 5.50e-10 | 89 |
brain | 1.29e-09 | 68 |
future brain | 1.29e-09 | 68 |
regional part of forebrain | 3.99e-09 | 41 |
forebrain | 3.99e-09 | 41 |
anterior neural tube | 3.99e-09 | 41 |
future forebrain | 3.99e-09 | 41 |
neural plate | 4.30e-09 | 82 |
presumptive neural plate | 4.30e-09 | 82 |
neurectoderm | 2.38e-08 | 86 |
germ layer | 2.69e-08 | 560 |
germ layer / neural crest | 2.69e-08 | 560 |
embryonic tissue | 2.69e-08 | 560 |
presumptive structure | 2.69e-08 | 560 |
germ layer / neural crest derived structure | 2.69e-08 | 560 |
epiblast (generic) | 2.69e-08 | 560 |
embryonic structure | 7.93e-08 | 564 |
hematopoietic system | 2.28e-07 | 98 |
blood island | 2.28e-07 | 98 |
developing anatomical structure | 3.92e-07 | 581 |
bone element | 4.28e-07 | 82 |
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