FFCP PHASE1:Hg19::chr1:159046617..159046630,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9447|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=357|TSSclassifier=S|UniProt=O14862|association_with_transcript=16bp_to_NM_004833,uc001ftj.1_5end|description=CAGE_peak_2_at_AIM2_5end|id=chr1:159046617..159046630,-|ontology_enrichment_celltype=CL:0002087!1.34e-27!119;CL:0000738!2.48e-23!140;CL:0002031!1.03e-22!124;CL:0002057!2.55e-18!42;CL:0000988!5.28e-18!182;CL:0000037!1.87e-17!172;CL:0000566!1.87e-17!172;CL:0002032!8.31e-17!165;CL:0000837!8.31e-17!165;CL:0000860!1.76e-16!45;CL:0000945!2.81e-16!24;CL:0000826!2.81e-16!24;CL:0000542!1.63e-13!53;CL:0000051!1.63e-13!53;CL:0002194!2.11e-13!63;CL:0000576!2.11e-13!63;CL:0000040!2.11e-13!63;CL:0000559!2.11e-13!63;CL:0000838!8.54e-13!52;CL:0002009!1.08e-12!65;CL:0000766!3.99e-11!76;CL:0000839!4.07e-11!70;CL:0000557!7.88e-11!71|ontology_enrichment_celltype_v019=CL:0000945;2.28e-23;24!CL:0000860;3.79e-20;33!CL:0002057;3.79e-20;33!CL:0000473;7.89e-13;39!CL:0000234;7.89e-13;39!CL:0000542;1.20e-11;53!CL:0000576;2.93e-11;48!CL:0002087;4.50e-09;104|ontology_enrichment_celltype_v019_2=CL:0002087,1.99e-26,115;CL:0002031,5.38e-25,120;CL:0000945,1.80e-23,24;CL:0000826,1.80e-23,24;CL:0000738,4.04e-21,136;CL:0000860,2.42e-18,42;CL:0002057,2.42e-18,42;CL:0000988,6.11e-17,177;CL:0002032,1.30e-16,161;CL:0000837,1.30e-16,161;CL:0000838,1.64e-16,52;CL:0000542,4.03e-16,53;CL:0000051,4.03e-16,53;CL:0000037,1.36e-15,168;CL:0000473,1.44e-15,48;CL:0000234,1.44e-15,48;CL:0002194,1.05e-11,59;CL:0000576,1.05e-11,59;CL:0000040,1.05e-11,59;CL:0000559,1.05e-11,59;CL:0002009,3.31e-11,61;CL:0000839,4.25e-10,66;CL:0000557,6.76e-10,67;CL:0000766,5.66e-09,72|ontology_enrichment_development_v019=CL:0002057;9.19e-14;42!CL:0000051;1.20e-11;53|ontology_enrichment_disease=DOID:0060058!8.14e-12!10;DOID:1749!1.38e-07!14|ontology_enrichment_disease_v019=DOID:0060058;8.40e-23;10|ontology_enrichment_disease_v019_2=DOID:0060058,2.75e-23,10|ontology_enrichment_uberon=UBERON:0002390!7.37e-19!102;UBERON:0003061!7.37e-19!102;UBERON:0002193!1.02e-17!112;UBERON:0002371!2.98e-10!80;UBERON:0002405!4.54e-10!115;UBERON:0001474!1.29e-09!86;UBERON:0004765!4.39e-09!101;UBERON:0001434!4.39e-09!101;UBERON:0000178!3.91e-07!15;UBERON:0000179!3.91e-07!15;UBERON:0000463!3.91e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-12,98;UBERON:0003061,2.09e-12,98;UBERON:0002193,5.92e-12,108;UBERON:0002405,9.63e-12,93;UBERON:0002371,1.27e-09,76;UBERON:0001474,1.19e-08,82;UBERON:0004765,1.46e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.31360943119913,1.10195093839151,0,0,0.154816123316076,0,0,0,2.94375362205146,1.56386155736164,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.436194716338694,0,0,0,0,0.309706370895104,2.3015391385772,1.5369642391746,2.83778675866302,0.689491361473237,0,1.35426486594342,0,0,0,2.44867113896722,0,0.639337125799041,0.989553900560148,1.59570926097305,1.27867425159808,1.16083695451434,1.13477044938228,0,1.7587406567972,2.08593167368081,1.52032191293582,4.84319602106695,1.47311054395026,1.58231193720442,0,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,0.855038231223746,0,1.0959849225878,0,0,0.889509253863555,2.13365111283254,2.40237592221607,0,0.661044872784862,2.86216126360609,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,1.44833593950726,0.589211814949674,0.443067789167242,0.270803863765016,0.384273959177026,0.650296737799391,0,0,0,0,0,0,0.339928028092699,1.14966148080576,0.68725489096526,0.506039384039006,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,1.3878872442239,0.532685175939381,0.9033987161519,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.751941714077915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.952927101831156,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.735120647943095,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,4.34629198682166,0,0,0,0,0,0.140669416410513,0,2.63686198762815,0,0.19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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=357 | |||
|TSSclassifier=S | |||
|UniProt=O14862 | |||
|association_with_transcript=16bp_to_NM_004833,uc001ftj.1_5end | |||
|description=CAGE_peak_2_at_AIM2_5end | |||
|id=chr1:159046617..159046630,- | |||
|ontology_enrichment_celltype=CL:0002087!1.34e-27!119;CL:0000738!2.48e-23!140;CL:0002031!1.03e-22!124;CL:0002057!2.55e-18!42;CL:0000988!5.28e-18!182;CL:0000037!1.87e-17!172;CL:0000566!1.87e-17!172;CL:0002032!8.31e-17!165;CL:0000837!8.31e-17!165;CL:0000860!1.76e-16!45;CL:0000945!2.81e-16!24;CL:0000826!2.81e-16!24;CL:0000542!1.63e-13!53;CL:0000051!1.63e-13!53;CL:0002194!2.11e-13!63;CL:0000576!2.11e-13!63;CL:0000040!2.11e-13!63;CL:0000559!2.11e-13!63;CL:0000838!8.54e-13!52;CL:0002009!1.08e-12!65;CL:0000766!3.99e-11!76;CL:0000839!4.07e-11!70;CL:0000557!7.88e-11!71 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.28e-23;24!CL:0000860;3.79e-20;33!CL:0002057;3.79e-20;33!CL:0000473;7.89e-13;39!CL:0000234;7.89e-13;39!CL:0000542;1.20e-11;53!CL:0000576;2.93e-11;48!CL:0002087;4.50e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.99e-26,115;CL:0002031,5.38e-25,120;CL:0000945,1.80e-23,24;CL:0000826,1.80e-23,24;CL:0000738,4.04e-21,136;CL:0000860,2.42e-18,42;CL:0002057,2.42e-18,42;CL:0000988,6.11e-17,177;CL:0002032,1.30e-16,161;CL:0000837,1.30e-16,161;CL:0000838,1.64e-16,52;CL:0000542,4.03e-16,53;CL:0000051,4.03e-16,53;CL:0000037,1.36e-15,168;CL:0000473,1.44e-15,48;CL:0000234,1.44e-15,48;CL:0002194,1.05e-11,59;CL:0000576,1.05e-11,59;CL:0000040,1.05e-11,59;CL:0000559,1.05e-11,59;CL:0002009,3.31e-11,61;CL:0000839,4.25e-10,66;CL:0000557,6.76e-10,67;CL:0000766,5.66e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;9.19e-14;42!CL:0000051;1.20e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.14e-12!10;DOID:1749!1.38e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.40e-23;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.75e-23,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.37e-19!102;UBERON:0003061!7.37e-19!102;UBERON:0002193!1.02e-17!112;UBERON:0002371!2.98e-10!80;UBERON:0002405!4.54e-10!115;UBERON:0001474!1.29e-09!86;UBERON:0004765!4.39e-09!101;UBERON:0001434!4.39e-09!101;UBERON:0000178!3.91e-07!15;UBERON:0000179!3.91e-07!15;UBERON:0000463!3.91e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-12,98;UBERON:0003061,2.09e-12,98;UBERON:0002193,5.92e-12,108;UBERON:0002405,9.63e-12,93;UBERON:0002371,1.27e-09,76;UBERON:0001474,1.19e-08,82;UBERON:0004765,1.46e-07,90 | |||
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|short_description=p2@AIM2 | |||
}} |
Revision as of 01:06, 12 September 2013
Short description: | p2@AIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AIM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_004833, uc001ftj.1_5end |
EntrezGene: | AIM2 |
HGNC: | 357 |
UniProt: | O14862 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.99e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 5.38e-25 | 120 |
lymphocyte of B lineage | 1.80e-23 | 24 |
pro-B cell | 1.80e-23 | 24 |
leukocyte | 4.04e-21 | 136 |
classical monocyte | 2.42e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-18 | 42 |
hematopoietic cell | 6.11e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.30e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-16 | 161 |
lymphoid lineage restricted progenitor cell | 1.64e-16 | 52 |
lymphocyte | 4.03e-16 | 53 |
common lymphoid progenitor | 4.03e-16 | 53 |
hematopoietic stem cell | 1.36e-15 | 168 |
defensive cell | 1.44e-15 | 48 |
phagocyte | 1.44e-15 | 48 |
monopoietic cell | 1.05e-11 | 59 |
monocyte | 1.05e-11 | 59 |
monoblast | 1.05e-11 | 59 |
promonocyte | 1.05e-11 | 59 |
macrophage dendritic cell progenitor | 3.31e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.25e-10 | 66 |
granulocyte monocyte progenitor cell | 6.76e-10 | 67 |
myeloid leukocyte | 5.66e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-12 | 98 |
blood island | 2.09e-12 | 98 |
hemolymphoid system | 5.92e-12 | 108 |
immune system | 9.63e-12 | 93 |
bone marrow | 1.27e-09 | 76 |
bone element | 1.19e-08 | 82 |
skeletal element | 1.46e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.75e-23 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.