FFCP PHASE1:Hg19::chr1:160766011..160766032,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4063|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6730|TSSclassifier=S|UniProt=Q5VYH9|association_with_transcript=0bp_to_ENST00000392203_5end|coexpression_cluster_id=C179|description=CAGE_peak_2_at_LY9_5end|id=chr1:160766011..160766032,+|ontology_enrichment_celltype=CL:0000738!3.73e-71!140;CL:0002087!1.64e-70!119;CL:0002031!4.46e-62!124;CL:0000037!6.24e-58!172;CL:0000566!6.24e-58!172;CL:0002032!1.14e-52!165;CL:0000837!1.14e-52!165;CL:0000988!1.29e-52!182;CL:0000542!9.09e-39!53;CL:0000051!9.09e-39!53;CL:0000838!7.93e-38!52;CL:0002009!1.64e-28!65;CL:0002194!4.64e-27!63;CL:0000576!4.64e-27!63;CL:0000040!4.64e-27!63;CL:0000559!4.64e-27!63;CL:0002057!9.21e-26!42;CL:0000557!1.15e-24!71;CL:0000766!1.35e-24!76;CL:0000860!3.60e-23!45;CL:0000839!9.85e-23!70;CL:0000791!4.75e-21!18;CL:0000789!4.75e-21!18;CL:0002420!4.75e-21!18;CL:0002419!4.75e-21!18;CL:0000790!4.75e-21!18;CL:0000945!1.26e-19!24;CL:0000826!1.26e-19!24;CL:0000763!4.11e-18!112;CL:0000049!4.11e-18!112;CL:0000084!3.45e-16!25;CL:0000827!3.45e-16!25;CL:0000236!6.80e-14!14;CL:0000625!1.97e-13!11;CL:0000134!2.83e-10!358;CL:0002320!1.57e-09!365;CL:0000451!2.40e-09!10;CL:0000624!2.22e-08!6;CL:0000990!4.57e-07!8;CL:0000219!5.12e-07!390;CL:0000840!8.08e-07!5;CL:0001029!8.08e-07!5|ontology_enrichment_celltype_v019=CL:0000791;2.22e-30;18!CL:0000789;2.22e-30;18!CL:0002419;2.22e-30;18!CL:0000542;4.63e-27;53!CL:0000084;2.56e-22;25!CL:0000860;6.68e-22;33!CL:0002057;6.68e-22;33!CL:0000473;4.37e-21;39!CL:0000234;4.37e-21;39!CL:0002087;1.20e-20;104!CL:0000945;1.46e-20;24!CL:0000625;4.48e-19;11!CL:0000738;4.01e-16;136!CL:0000236;6.43e-14;13!CL:0000451;3.09e-13;10!CL:0000576;5.17e-12;48!CL:0000624;1.24e-11;6!CL:0000766;4.27e-10;69!CL:0000990;7.14e-10;8!CL:0000840;2.67e-09;5!CL:0000988;1.65e-08;177!CL:0000219;1.80e-07;193!CL:0000784;4.65e-07;3!CL:0000898;9.82e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,5.01e-82,136;CL:0002087,1.09e-79,115;CL:0002031,2.80e-70,120;CL:0000037,3.38e-63,168;CL:0000988,1.09e-58,177;CL:0002032,2.40e-57,161;CL:0000837,2.40e-57,161;CL:0000542,8.30e-48,53;CL:0000051,8.30e-48,53;CL:0000838,1.86e-46,52;CL:0000791,2.50e-30,18;CL:0000789,2.50e-30,18;CL:0002420,2.50e-30,18;CL:0002419,2.50e-30,18;CL:0000790,2.50e-30,18;CL:0002009,1.27e-28,61;CL:0002194,1.14e-26,59;CL:0000576,1.14e-26,59;CL:0000040,1.14e-26,59;CL:0000559,1.14e-26,59;CL:0000473,9.81e-26,48;CL:0000234,9.81e-26,48;CL:0000557,4.71e-25,67;CL:0000766,2.69e-24,72;CL:0000839,1.03e-22,66;CL:0000084,3.07e-22,25;CL:0000827,3.07e-22,25;CL:0000860,3.04e-21,42;CL:0002057,3.04e-21,42;CL:0000945,1.37e-20,24;CL:0000826,1.37e-20,24;CL:0000625,4.57e-19,11;CL:0000763,6.06e-17,108;CL:0000049,6.06e-17,108;CL:0000134,6.08e-17,354;CL:0002320,3.73e-16,361;CL:0000236,1.35e-15,14;CL:0000219,2.08e-13,386;CL:0000451,2.76e-13,10;CL:0000624,1.29e-11,6;CL:0000034,3.84e-10,441;CL:0000048,4.02e-10,427;CL:0000990,6.46e-10,8;CL:0000723,1.12e-09,433;CL:0000840,2.53e-09,5;CL:0001029,2.53e-09,5;CL:0000784,4.65e-07,3|ontology_enrichment_development_v019=CL:0000790;2.22e-30;18!CL:0000051;4.63e-27;53!CL:0002057;1.24e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.12e-34!102;UBERON:0003061!4.12e-34!102;UBERON:0002193!1.69e-31!112;UBERON:0002371!5.65e-21!80;UBERON:0001474!2.27e-18!86;UBERON:0002405!3.00e-17!115;UBERON:0004765!2.48e-13!101;UBERON:0001434!2.48e-13!101;UBERON:0002384!6.87e-09!375;UBERON:0000178!8.56e-09!15;UBERON:0000179!8.56e-09!15;UBERON:0000463!8.56e-09!15;UBERON:0003081!2.99e-08!216;UBERON:0004177!5.31e-08!7|ontology_enrichment_uberon_v019=UBERON:0000178;6.89e-11;15!UBERON:0000179;6.89e-11;15!UBERON:0000463;6.89e-11;15!UBERON:0002390;1.93e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-36,98;UBERON:0003061,3.21e-36,98;UBERON:0002193,2.16e-34,108;UBERON:0002405,4.13e-25,93;UBERON:0002371,8.95e-21,76;UBERON:0001474,1.85e-18,82;UBERON:0004765,7.21e-16,90;UBERON:0002384,4.36e-15,371;UBERON:0001434,3.04e-13,100;UBERON:0000178,5.81e-11,15;UBERON:0000179,5.81e-11,15;UBERON:0000463,5.81e-11,15;UBERON:0003081,6.77e-11,203;UBERON:0004177,9.22e-09,7;UBERON:0005057,9.22e-09,7;UBERON:0002370,1.58e-07,4;UBERON:0005058,1.58e-07,4;UBERON:0009113,1.58e-07,4;UBERON:0003295,1.58e-07,4;UBERON:0005562,1.58e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,2.05251473624864,1.25937250101887,3.14691421479123,6.1412703695554,5.26374819274658,0,0,0,3.95082722959538,0.995184627411951,0.293600439334847,4.43196326825502,2.20598892217156,2.17010870715852,0.223915474239924,1.6194683300949,0,1.16318591023652,10.2026504795979,1.4555043671269,4.88100977501938,27.1370806094405,18.5823822537062,0.863077176966451,3.84241059793651,1.41889337933151,4.82643953031266,15.4916324060118,8.12558919566051,3.76484679085209,15.8285567033551,4.26974620445661,3.06083892370903,13.1580901101198,3.19668562899521,0.329851300186716,2.3935638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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6730 | |||
|TSSclassifier=S | |||
|UniProt=Q5VYH9 | |||
|association_with_transcript=0bp_to_ENST00000392203_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_2_at_LY9_5end | |||
|id=chr1:160766011..160766032,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.73e-71!140;CL:0002087!1.64e-70!119;CL:0002031!4.46e-62!124;CL:0000037!6.24e-58!172;CL:0000566!6.24e-58!172;CL:0002032!1.14e-52!165;CL:0000837!1.14e-52!165;CL:0000988!1.29e-52!182;CL:0000542!9.09e-39!53;CL:0000051!9.09e-39!53;CL:0000838!7.93e-38!52;CL:0002009!1.64e-28!65;CL:0002194!4.64e-27!63;CL:0000576!4.64e-27!63;CL:0000040!4.64e-27!63;CL:0000559!4.64e-27!63;CL:0002057!9.21e-26!42;CL:0000557!1.15e-24!71;CL:0000766!1.35e-24!76;CL:0000860!3.60e-23!45;CL:0000839!9.85e-23!70;CL:0000791!4.75e-21!18;CL:0000789!4.75e-21!18;CL:0002420!4.75e-21!18;CL:0002419!4.75e-21!18;CL:0000790!4.75e-21!18;CL:0000945!1.26e-19!24;CL:0000826!1.26e-19!24;CL:0000763!4.11e-18!112;CL:0000049!4.11e-18!112;CL:0000084!3.45e-16!25;CL:0000827!3.45e-16!25;CL:0000236!6.80e-14!14;CL:0000625!1.97e-13!11;CL:0000134!2.83e-10!358;CL:0002320!1.57e-09!365;CL:0000451!2.40e-09!10;CL:0000624!2.22e-08!6;CL:0000990!4.57e-07!8;CL:0000219!5.12e-07!390;CL:0000840!8.08e-07!5;CL:0001029!8.08e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.22e-30;18!CL:0000789;2.22e-30;18!CL:0002419;2.22e-30;18!CL:0000542;4.63e-27;53!CL:0000084;2.56e-22;25!CL:0000860;6.68e-22;33!CL:0002057;6.68e-22;33!CL:0000473;4.37e-21;39!CL:0000234;4.37e-21;39!CL:0002087;1.20e-20;104!CL:0000945;1.46e-20;24!CL:0000625;4.48e-19;11!CL:0000738;4.01e-16;136!CL:0000236;6.43e-14;13!CL:0000451;3.09e-13;10!CL:0000576;5.17e-12;48!CL:0000624;1.24e-11;6!CL:0000766;4.27e-10;69!CL:0000990;7.14e-10;8!CL:0000840;2.67e-09;5!CL:0000988;1.65e-08;177!CL:0000219;1.80e-07;193!CL:0000784;4.65e-07;3!CL:0000898;9.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.01e-82,136;CL:0002087,1.09e-79,115;CL:0002031,2.80e-70,120;CL:0000037,3.38e-63,168;CL:0000988,1.09e-58,177;CL:0002032,2.40e-57,161;CL:0000837,2.40e-57,161;CL:0000542,8.30e-48,53;CL:0000051,8.30e-48,53;CL:0000838,1.86e-46,52;CL:0000791,2.50e-30,18;CL:0000789,2.50e-30,18;CL:0002420,2.50e-30,18;CL:0002419,2.50e-30,18;CL:0000790,2.50e-30,18;CL:0002009,1.27e-28,61;CL:0002194,1.14e-26,59;CL:0000576,1.14e-26,59;CL:0000040,1.14e-26,59;CL:0000559,1.14e-26,59;CL:0000473,9.81e-26,48;CL:0000234,9.81e-26,48;CL:0000557,4.71e-25,67;CL:0000766,2.69e-24,72;CL:0000839,1.03e-22,66;CL:0000084,3.07e-22,25;CL:0000827,3.07e-22,25;CL:0000860,3.04e-21,42;CL:0002057,3.04e-21,42;CL:0000945,1.37e-20,24;CL:0000826,1.37e-20,24;CL:0000625,4.57e-19,11;CL:0000763,6.06e-17,108;CL:0000049,6.06e-17,108;CL:0000134,6.08e-17,354;CL:0002320,3.73e-16,361;CL:0000236,1.35e-15,14;CL:0000219,2.08e-13,386;CL:0000451,2.76e-13,10;CL:0000624,1.29e-11,6;CL:0000034,3.84e-10,441;CL:0000048,4.02e-10,427;CL:0000990,6.46e-10,8;CL:0000723,1.12e-09,433;CL:0000840,2.53e-09,5;CL:0001029,2.53e-09,5;CL:0000784,4.65e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.22e-30;18!CL:0000051;4.63e-27;53!CL:0002057;1.24e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.12e-34!102;UBERON:0003061!4.12e-34!102;UBERON:0002193!1.69e-31!112;UBERON:0002371!5.65e-21!80;UBERON:0001474!2.27e-18!86;UBERON:0002405!3.00e-17!115;UBERON:0004765!2.48e-13!101;UBERON:0001434!2.48e-13!101;UBERON:0002384!6.87e-09!375;UBERON:0000178!8.56e-09!15;UBERON:0000179!8.56e-09!15;UBERON:0000463!8.56e-09!15;UBERON:0003081!2.99e-08!216;UBERON:0004177!5.31e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.89e-11;15!UBERON:0000179;6.89e-11;15!UBERON:0000463;6.89e-11;15!UBERON:0002390;1.93e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-36,98;UBERON:0003061,3.21e-36,98;UBERON:0002193,2.16e-34,108;UBERON:0002405,4.13e-25,93;UBERON:0002371,8.95e-21,76;UBERON:0001474,1.85e-18,82;UBERON:0004765,7.21e-16,90;UBERON:0002384,4.36e-15,371;UBERON:0001434,3.04e-13,100;UBERON:0000178,5.81e-11,15;UBERON:0000179,5.81e-11,15;UBERON:0000463,5.81e-11,15;UBERON:0003081,6.77e-11,203;UBERON:0004177,9.22e-09,7;UBERON:0005057,9.22e-09,7;UBERON:0002370,1.58e-07,4;UBERON:0005058,1.58e-07,4;UBERON:0009113,1.58e-07,4;UBERON:0003295,1.58e-07,4;UBERON:0005562,1.58e-07,4 | |||
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|short_description=p2@LY9 | |||
}} |
Revision as of 01:18, 12 September 2013
Short description: | p2@LY9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LY9_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 0bp_to_ENST00000392203_5end |
EntrezGene: | LY9 |
HGNC: | 6730 |
UniProt: | Q5VYH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.21e-36 | 98 |
blood island | 3.21e-36 | 98 |
hemolymphoid system | 2.16e-34 | 108 |
immune system | 4.13e-25 | 93 |
bone marrow | 8.95e-21 | 76 |
bone element | 1.85e-18 | 82 |
skeletal element | 7.21e-16 | 90 |
connective tissue | 4.36e-15 | 371 |
skeletal system | 3.04e-13 | 100 |
blood | 5.81e-11 | 15 |
haemolymphatic fluid | 5.81e-11 | 15 |
organism substance | 5.81e-11 | 15 |
lateral plate mesoderm | 6.77e-11 | 203 |
hemopoietic organ | 9.22e-09 | 7 |
immune organ | 9.22e-09 | 7 |
thymus | 1.58e-07 | 4 |
hemolymphoid system gland | 1.58e-07 | 4 |
thymic region | 1.58e-07 | 4 |
pharyngeal gland | 1.58e-07 | 4 |
thymus primordium | 1.58e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.