FFCP PHASE1:Hg19::chr20:9494967..9494972,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=24141|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16097|TSSclassifier=S|UniProt=Q9UJQ1|association_with_transcript=-32bp_to_NM_001199897,NM_012261_5end|coexpression_cluster_id=C35|description=CAGE_peak_16_at_LAMP5_5end|id=chr20:9494967..9494972,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006222;7.05e-34;1!UBERON:0010122;7.05e-18;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!1.17e-61!32;UBERON:0001893!6.60e-58!34;UBERON:0002020!8.84e-58!34;UBERON:0003528!8.84e-58!34;UBERON:0002791!1.54e-53!33;UBERON:0002780!4.55e-53!41;UBERON:0001890!4.55e-53!41;UBERON:0006240!4.55e-53!41;UBERON:0003080!9.76e-52!42;UBERON:0001049!1.21e-49!57;UBERON:0005068!1.21e-49!57;UBERON:0006241!1.21e-49!57;UBERON:0007135!1.21e-49!57;UBERON:0002619!7.34e-48!22;UBERON:0001950!4.22e-45!20;UBERON:0000955!1.15e-43!69;UBERON:0006238!1.15e-43!69;UBERON:0002616!1.29e-43!59;UBERON:0001017!6.31e-43!82;UBERON:0000956!5.19e-42!25;UBERON:0000203!5.19e-42!25;UBERON:0005743!9.67e-41!86;UBERON:0003075!9.01e-38!86;UBERON:0007284!9.01e-38!86;UBERON:0000073!1.76e-36!94;UBERON:0001016!1.76e-36!94;UBERON:0002346!6.86e-36!90;UBERON:0003056!1.38e-34!61;UBERON:0007023!1.44e-32!115;UBERON:0000369!2.17e-25!4;UBERON:0002435!2.17e-25!4;UBERON:0000204!2.17e-25!4;UBERON:0010082!2.17e-25!4;UBERON:0002420!1.43e-24!9;UBERON:0007245!1.43e-24!9;UBERON:0010009!1.43e-24!9;UBERON:0010011!1.43e-24!9;UBERON:0000454!1.43e-24!9;UBERON:0000200!1.47e-24!6;UBERON:0000033!1.13e-22!123;UBERON:0000153!2.09e-21!129;UBERON:0007811!2.09e-21!129;UBERON:0000349!2.49e-20!5;UBERON:0004121!5.33e-20!169;UBERON:0005383!1.76e-19!3;UBERON:0005382!1.76e-19!3;UBERON:0000924!2.01e-19!173;UBERON:0006601!2.01e-19!173;UBERON:0001871!5.18e-19!7;UBERON:0002308!6.82e-17!9;UBERON:0000125!6.82e-17!9;UBERON:0009663!1.40e-14!7;UBERON:0001876!1.66e-13!2;UBERON:0001873!1.77e-13!2;UBERON:0010122!1.77e-13!2;UBERON:0001870!5.28e-13!2;UBERON:0000025!1.13e-12!194;UBERON:0001872!9.24e-11!5;UBERON:0004111!2.80e-10!241;UBERON:0002771!4.79e-09!3;UBERON:0000064!1.60e-08!219;UBERON:0000988!2.04e-08!3;UBERON:0000477!7.20e-08!286;UBERON:0001874!9.91e-08!1;UBERON:0001882!1.20e-07!1;UBERON:0005403!1.20e-07!1;UBERON:0002702!1.74e-07!1;UBERON:0002022!2.37e-07!1;UBERON:0002902!3.21e-07!1;UBERON:0009899!3.21e-07!1;UBERON:0002146!3.62e-07!1;UBERON:0005623!3.62e-07!1;UBERON:0007190!4.08e-07!1;UBERON:0002581!6.20e-07!1;UBERON:0000483!6.20e-07!309;UBERON:0000119!8.08e-07!312|ontology_enrichment_uberon_v019=UBERON:0000369;2.28e-74;4!UBERON:0002435;2.28e-74;4!UBERON:0000204;2.28e-74;4!UBERON:0000349;2.22e-59;5!UBERON:0002420;1.08e-58;9!UBERON:0007245;1.08e-58;9!UBERON:0010009;1.08e-58;9!UBERON:0010011;1.08e-58;9!UBERON:0000454;1.08e-58;9!UBERON:0005383;5.59e-45;3!UBERON:0005382;5.59e-45;3!UBERON:0009663;5.61e-43;7!UBERON:0001874;1.84e-34;1!UBERON:0001882;7.05e-34;1!UBERON:0005403;7.05e-34;1!UBERON:0000125;1.17e-33;9!UBERON:0002308;1.17e-33;9!UBERON:0002791;6.16e-26;32!UBERON:0002780;4.69e-25;41!UBERON:0001890;4.69e-25;41!UBERON:0001869;5.48e-24;32!UBERON:0003528;5.04e-23;34!UBERON:0002020;5.04e-23;34!UBERON:0001893;1.58e-21;34!UBERON:0000073;4.73e-18;53!UBERON:0002616;4.73e-18;53!UBERON:0001873;7.05e-18;2!UBERON:0001954;7.05e-18;2!UBERON:0003022;7.05e-18;2!UBERON:0002421;7.05e-18;2!UBERON:0002600;7.05e-18;2!UBERON:0001876;1.07e-17;2!UBERON:0000955;1.49e-11;68!UBERON:0001017;3.33e-09;75!UBERON:0001016;4.26e-08;83|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.56e-74,4;UBERON:0002435,1.56e-74,4;UBERON:0000204,1.56e-74,4;UBERON:0010082,1.56e-74,4;UBERON:0000349,2.01e-59,5;UBERON:0002420,8.65e-59,9;UBERON:0007245,8.65e-59,9;UBERON:0010009,8.65e-59,9;UBERON:0010011,8.65e-59,9;UBERON:0000454,8.65e-59,9;UBERON:0005383,5.00e-45,3;UBERON:0005382,5.00e-45,3;UBERON:0009663,4.53e-43,7;UBERON:0001874,1.84e-34,1;UBERON:0001882,5.05e-34,1;UBERON:0005403,5.05e-34,1;UBERON:0000125,9.92e-34,9;UBERON:0002308,9.92e-34,9;UBERON:0002780,1.39e-28,41;UBERON:0001890,1.39e-28,41;UBERON:0003080,1.39e-28,41;UBERON:0006240,1.39e-28,41;UBERON:0002791,1.99e-25,32;UBERON:0001869,1.99e-25,32;UBERON:0003528,5.19e-24,34;UBERON:0002020,5.19e-24,34;UBERON:0001893,5.19e-24,34;UBERON:0000073,2.29e-22,53;UBERON:0002616,2.29e-22,53;UBERON:0001049,3.21e-21,56;UBERON:0005068,3.21e-21,56;UBERON:0006241,3.21e-21,56;UBERON:0007135,3.21e-21,56;UBERON:0003056,1.49e-19,61;UBERON:0001873,6.48e-18,2;UBERON:0010122,6.48e-18,2;UBERON:0001954,7.67e-18,2;UBERON:0003022,7.67e-18,2;UBERON:0002421,7.67e-18,2;UBERON:0002600,7.67e-18,2;UBERON:0001876,1.07e-17,2;UBERON:0000955,2.22e-17,68;UBERON:0006238,2.22e-17,68;UBERON:0001017,9.81e-15,81;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0002346,4.44e-14,86;UBERON:0001016,2.44e-13,89;UBERON:0010371,9.68e-12,104;UBERON:0007023,7.60e-11,114;UBERON:0010314,2.38e-09,132;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,3.49729672013683,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54150140231503,0,0,0.41023272848151,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,7.54154831596809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p16@LAMP5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=24141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |||
|TSSclassifier=S | |||
|UniProt=Q9UJQ1 | |||
|association_with_transcript=-32bp_to_NM_001199897,NM_012261_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_16_at_LAMP5_5end | |||
|id=chr20:9494967..9494972,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;7.05e-34;1!UBERON:0010122;7.05e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p16@LAMP5 | |||
}} |
Revision as of 09:45, 12 September 2013
Short description: | p16@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -32bp_to_NM_001199897, NM_012261_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.