FFCP PHASE1:Hg19::chr22:38321975..38321988,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr22:38321975..38321988,+|id=chr22:38321975..38321988,+|ontology_enrichment_celltype=CL:0002076!2.04e-08!43;CL:0000223!6.76e-08!59|ontology_enrichment_celltype_v019=CL:0002231;1.83e-25;3!CL:0002368;1.98e-22;13!CL:0002076;1.10e-12;42!CL:0000317;2.48e-10;2!CL:1000448;2.48e-10;2!CL:0002262;2.48e-10;2!CL:0002308;2.48e-10;2!CL:1000398;2.48e-10;2!CL:0002140;2.48e-10;2!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3!CL:0002567;2.63e-07;3!CL:0000307;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002231,1.83e-25,3;CL:0002368,3.45e-22,13;CL:0002076,2.76e-15,42;CL:0000223,6.89e-15,58;CL:0002262,2.27e-10,2;CL:1000398,2.27e-10,2;CL:0000317,2.49e-10,2;CL:1000448,2.49e-10,2;CL:0002308,2.49e-10,2;CL:0002140,2.49e-10,2;CL:0002567,2.05e-07,3;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3|ontology_enrichment_development_v019=CL:0000223;1.47e-09;58!CL:0000377;2.63e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002419;2.48e-10;2!UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0007771;2.48e-10;2!UBERON:0003297;2.48e-10;2!UBERON:0001821;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0003487;2.48e-10;2!UBERON:0001820;2.48e-10;2!UBERON:0002367;1.20e-07;11!UBERON:0010147;1.20e-07;11!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3!UBERON:0003937;4.43e-07;12!UBERON:0005399;4.43e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.27e-10,2;UBERON:0003497,2.27e-10,2;UBERON:0003909,2.27e-10,2;UBERON:0003835,2.27e-10,2;UBERON:0002419,2.49e-10,2;UBERON:0007771,2.49e-10,2;UBERON:0003297,2.49e-10,2;UBERON:0001821,2.49e-10,2;UBERON:0003487,2.49e-10,2;UBERON:0001820,2.49e-10,2;UBERON:0005089,2.49e-10,2;UBERON:0005088,2.49e-10,2;UBERON:0002367,1.20e-07,11;UBERON:0010147,1.20e-07,11;UBERON:0009846,1.20e-07,11;UBERON:0003353,1.20e-07,11;UBERON:0004902,1.20e-07,11;UBERON:0003820,1.20e-07,11;UBERON:0009847,1.20e-07,11;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3;UBERON:0001280,2.47e-07,3;UBERON:0004647,2.47e-07,3;UBERON:0005171,2.47e-07,3;UBERON:0003937,4.43e-07,12;UBERON:0005399,4.43e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0.142169232487422,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0,0.362578348774867,2.20557117333613,2.4861867012692,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,1.30012049207304,0,0.386682873168488,0,0,0,0,0,0,0.0890320356467374,1.15699440752685,1.15314040419064,0,1.0115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.577332676353072,0,1.08890984861323,0.470719003883896,0.43050537267123,1.68471475667626,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:38321975..38321988,+ | |||
|id=chr22:38321975..38321988,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.04e-08!43;CL:0000223!6.76e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.83e-25;3!CL:0002368;1.98e-22;13!CL:0002076;1.10e-12;42!CL:0000317;2.48e-10;2!CL:1000448;2.48e-10;2!CL:0002262;2.48e-10;2!CL:0002308;2.48e-10;2!CL:1000398;2.48e-10;2!CL:0002140;2.48e-10;2!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3!CL:0002567;2.63e-07;3!CL:0000307;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.83e-25,3;CL:0002368,3.45e-22,13;CL:0002076,2.76e-15,42;CL:0000223,6.89e-15,58;CL:0002262,2.27e-10,2;CL:1000398,2.27e-10,2;CL:0000317,2.49e-10,2;CL:1000448,2.49e-10,2;CL:0002308,2.49e-10,2;CL:0002140,2.49e-10,2;CL:0002567,2.05e-07,3;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.47e-09;58!CL:0000377;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.48e-10;2!UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0007771;2.48e-10;2!UBERON:0003297;2.48e-10;2!UBERON:0001821;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0003487;2.48e-10;2!UBERON:0001820;2.48e-10;2!UBERON:0002367;1.20e-07;11!UBERON:0010147;1.20e-07;11!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3!UBERON:0003937;4.43e-07;12!UBERON:0005399;4.43e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.27e-10,2;UBERON:0003497,2.27e-10,2;UBERON:0003909,2.27e-10,2;UBERON:0003835,2.27e-10,2;UBERON:0002419,2.49e-10,2;UBERON:0007771,2.49e-10,2;UBERON:0003297,2.49e-10,2;UBERON:0001821,2.49e-10,2;UBERON:0003487,2.49e-10,2;UBERON:0001820,2.49e-10,2;UBERON:0005089,2.49e-10,2;UBERON:0005088,2.49e-10,2;UBERON:0002367,1.20e-07,11;UBERON:0010147,1.20e-07,11;UBERON:0009846,1.20e-07,11;UBERON:0003353,1.20e-07,11;UBERON:0004902,1.20e-07,11;UBERON:0003820,1.20e-07,11;UBERON:0009847,1.20e-07,11;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3;UBERON:0001280,2.47e-07,3;UBERON:0004647,2.47e-07,3;UBERON:0005171,2.47e-07,3;UBERON:0003937,4.43e-07,12;UBERON:0005399,4.43e-07,12 | |||
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|short_description=p@chr22:38321975..38321988,+ | |||
}} |
Revision as of 11:55, 12 September 2013
Short description: | p@chr22:38321975..38321988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:38321975..38321988, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.83e-25 | 3 |
respiratory epithelial cell | 3.45e-22 | 13 |
endo-epithelial cell | 2.76e-15 | 42 |
endodermal cell | 6.89e-15 | 58 |
endothelial cell of sinusoid | 2.27e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.27e-10 | 2 |
sebum secreting cell | 2.49e-10 | 2 |
epithelial cell of sweat gland | 2.49e-10 | 2 |
epithelial cell of skin gland | 2.49e-10 | 2 |
acinar cell of sebaceous gland | 2.49e-10 | 2 |
light melanocyte | 2.05e-07 | 3 |
hair follicle dermal papilla cell | 2.32e-07 | 3 |
stem cell of epidermis | 2.32e-07 | 3 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.27e-10 | 2 |
abdomen blood vessel | 2.27e-10 | 2 |
sinusoid | 2.27e-10 | 2 |
abdominal segment blood vessel | 2.27e-10 | 2 |
skin gland | 2.49e-10 | 2 |
epidermis gland | 2.49e-10 | 2 |
gland of integumental system | 2.49e-10 | 2 |
sebaceous gland | 2.49e-10 | 2 |
skin sebaceous gland | 2.49e-10 | 2 |
sweat gland | 2.49e-10 | 2 |
sweat gland placode | 2.49e-10 | 2 |
sebaceous gland placode | 2.49e-10 | 2 |
prostate gland | 1.20e-07 | 11 |
male accessory sex gland | 1.20e-07 | 11 |
embryonic cloacal epithelium | 1.20e-07 | 11 |
epithelium of hindgut | 1.20e-07 | 11 |
urogenital sinus epithelium | 1.20e-07 | 11 |
prostate bud | 1.20e-07 | 11 |
prostate field | 1.20e-07 | 11 |
dermal papilla | 2.32e-07 | 3 |
papillary layer of dermis | 2.32e-07 | 3 |
liver parenchyma | 2.47e-07 | 3 |
liver lobule | 2.47e-07 | 3 |
hepatic duct | 2.47e-07 | 3 |
sex gland | 4.43e-07 | 12 |
male reproductive gland | 4.43e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.